https://github.com/geodynamics/citcoms
Revision 7f010dc7da1be608224a65895765bc0511621189 authored by Luis Armendariz on 10 October 2006, 07:29:28 UTC, committed by Luis Armendariz on 10 October 2006, 07:29:28 UTC
2. Wrapped most calls to set_attribute() to avoid using addresses as arguments 3. Added set_attribute_{int,float,double}_vector() functions
1 parent 24fcb93
Tip revision: 7f010dc7da1be608224a65895765bc0511621189 authored by Luis Armendariz on 10 October 2006, 07:29:28 UTC
1. Added PID to metadata to make it easier to identify the corresponding .cfg file
1. Added PID to metadata to make it easier to identify the corresponding .cfg file
Tip revision: 7f010dc
autocombine.py
#!/usr/bin/env python
#
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
#
#<LicenseText>
#
# CitcomS.py by Eh Tan, Eun-seo Choi, and Pururav Thoutireddy.
# Copyright (C) 2002-2005, California Institute of Technology.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
#
#</LicenseText>
#
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
'''Automatically find the input parameters from CitcomS input file and run
'batchcombine.py'
usage: autocombine.py machinefile inputfile step1 [step2 [...] ]
'''
# default values for CitcomS input
defaults = {'output_format': 'ascii-local',
'datadir': '.',
'nprocx': 1,
'nprocy': 1,
'nprocz': 1,
'nodex': 9,
'nodey': 9,
'nodez': 9}
if __name__ == '__main__':
import sys
import batchcombine
if len(sys.argv) < 4:
print __doc__
sys.exit(1)
machinefile = sys.argv[1]
inputfile = sys.argv[2]
timesteps = [int(i) for i in sys.argv[3:]]
# parse input
from parser import Parser
parser = Parser(defaults)
parser.read(inputfile)
output_format = parser.getstr('output_format')
datafile = parser.getstr('datafile')
if output_format == 'ascii-local':
import os.path
modeldir, modelname = os.path.split(datafile)
#print modeldir, modelname
datadir = os.path.abspath(modeldir)
datafile = modelname
combine_fn = batchcombine.combine
elif output_format == 'ascii':
datadir = parser.getstr('datadir')
combine_fn = batchcombine.combine2
else:
print "Error: don't know how to combine the output", \
"(output_format=%s)" % output_format
sys.exit(1)
nodex = parser.getint('nodex')
nodey = parser.getint('nodey')
nodez = parser.getint('nodez')
ncap = parser.getint('nproc_surf')
nprocx = parser.getint('nprocx')
nprocy = parser.getint('nprocy')
nprocz = parser.getint('nprocz')
totalnodes = nprocx * nprocy * nprocz * ncap
nodelist = batchcombine.machinefile2nodes(machinefile, totalnodes)
for timestep in timesteps:
combine_fn(nodelist, datadir, datafile, timestep,
nodex, nodey, nodez,
ncap, nprocx, nprocy, nprocz)
# version
# $Id$
# End of file
Computing file changes ...