https://github.com/geodynamics/citcoms
Revision 7f010dc7da1be608224a65895765bc0511621189 authored by Luis Armendariz on 10 October 2006, 07:29:28 UTC, committed by Luis Armendariz on 10 October 2006, 07:29:28 UTC
2. Wrapped most calls to set_attribute() to avoid using addresses as arguments 3. Added set_attribute_{int,float,double}_vector() functions
1 parent 24fcb93
Tip revision: 7f010dc7da1be608224a65895765bc0511621189 authored by Luis Armendariz on 10 October 2006, 07:29:28 UTC
1. Added PID to metadata to make it easier to identify the corresponding .cfg file
1. Added PID to metadata to make it easier to identify the corresponding .cfg file
Tip revision: 7f010dc
batchsurf.py
#!/usr/bin/env python
#
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
#
#<LicenseText>
#
# CitcomS.py by Eh Tan, Eun-seo Choi, and Pururav Thoutireddy.
# Copyright (C) 2002-2005, California Institute of Technology.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
#
#</LicenseText>
#
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
#
'''
Combine Citcom Surface Data
usage: batchsurf.py machinefile modeldir modelname timestep nodex nodey nodez n_surf_proc nprocx nprocy nprocz
'''
if __name__ == '__main__':
import sys, os
if not len(sys.argv) == 12:
print __doc__
sys.exit(1)
machinefile = sys.argv[1]
modeldir = sys.argv[2]
modelname = sys.argv[3]
timestep = int(sys.argv[4])
nodex = int(sys.argv[5])
nodey = int(sys.argv[6])
nodez = int(sys.argv[7])
ncap = int(sys.argv[8])
nprocx = int(sys.argv[9])
nprocy = int(sys.argv[10])
nprocz = int(sys.argv[11])
# generate a string of machine names
from batchcombine import machinefile2nodes
totalnodes = nprocx * nprocy * nprocz * ncap
nodes = machinefile2nodes(machinefile, totalnodes)
# extract machines at the surface
tmp = nodes.split()[(nprocz-1)::nprocz]
nodes = ' '.join(tmp)
# get coordinate, if necessary
coord_exist = True
for n in range(totalnodes):
coord_file = '%(modelname)s.coord.%(n)d' % vars()
coord_exist &= os.path.exists(coord_file)
if not coord_exist:
cmd = 'getcoord.sh %(modeldir)s %(modelname)s %(nprocz)d %(nodes)s' % vars()
print cmd
os.system(cmd)
# get surf data
cmd = 'getsurf.sh %(modeldir)s %(modelname)s %(timestep)d %(nprocz)d %(nodes)s' % vars()
print cmd
os.system(cmd)
# combine
cmd = 'combinesurf.py %(modelname)s %(timestep)d %(nodex)d %(nodey)d %(nodez)d %(ncap)d %(nprocx)d %(nprocy)d %(nprocz)d' % vars()
print cmd
os.system(cmd)
# delete modelname.surf.* files, only if the originial data is not
# stored in the current directory, ie. if velofile exists
velofile = '%(modelname)s.velo.0.%(timestep)d' % vars()
if not os.path.exists(velofile):
cmd = 'rm %(modelname)s.surf.[0-9]*.%(timestep)d' % vars()
print cmd
os.system(cmd)
# create .general file
cmd = 'dxgeneralsurf.sh %(modelname)s.surf[0-9]*.%(timestep)d' % vars()
print cmd
os.system(cmd)
# version
# $Id$
# End of file
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