Revision 80aa77986ec84067f4696439f10fc77c93703bc7 authored by Tony Kelman on 26 October 2015, 12:41:37 UTC, committed by Tony Kelman on 26 October 2015, 12:41:37 UTC
1 parent 737a9a8
parallel.rst
.. currentmodule:: Base
******************************
Tasks and Parallel Computing
******************************
Tasks
-----
.. function:: Task(func)
Create a ``Task`` (i.e. thread, or coroutine) to execute the given function (which must be callable with no arguments). The task exits when this function returns.
.. function:: yieldto(task, args...)
Switch to the given task. The first time a task is switched to, the task's function is called with no arguments. On subsequent switches, ``args`` are returned from the task's last call to ``yieldto``. This is a low-level call that only switches tasks, not considering states or scheduling in any way.
.. function:: current_task()
Get the currently running Task.
.. function:: istaskdone(task) -> Bool
Tell whether a task has exited.
.. function:: consume(task, values...)
Receive the next value passed to ``produce`` by the specified task.
Additional arguments may be passed, to be returned from the last ``produce`` call
in the producer.
.. function:: produce(value)
Send the given value to the last ``consume`` call, switching to the consumer task.
If the next ``consume`` call passes any values, they are returned by ``produce``.
.. function:: yield()
Switch to the scheduler to allow another scheduled task to run. A task that calls this function is still runnable, and will be restarted immediately if there are no other runnable tasks.
.. function:: task_local_storage(symbol)
Look up the value of a symbol in the current task's task-local storage.
.. function:: task_local_storage(symbol, value)
Assign a value to a symbol in the current task's task-local storage.
.. function:: task_local_storage(body, symbol, value)
Call the function ``body`` with a modified task-local storage, in which
``value`` is assigned to ``symbol``; the previous value of ``symbol``, or
lack thereof, is restored afterwards. Useful for emulating dynamic scoping.
.. function:: Condition()
Create an edge-triggered event source that tasks can wait for. Tasks
that call ``wait`` on a ``Condition`` are suspended and queued.
Tasks are woken up when ``notify`` is later called on the ``Condition``.
Edge triggering means that only tasks waiting at the time ``notify`` is
called can be woken up. For level-triggered notifications, you must
keep extra state to keep track of whether a notification has happened.
The ``RemoteRef`` type does this, and so can be used for level-triggered
events.
.. function:: notify(condition, val=nothing; all=true, error=false)
Wake up tasks waiting for a condition, passing them ``val``.
If ``all`` is true (the default), all waiting tasks are woken, otherwise
only one is. If ``error`` is true, the passed value is raised as an
exception in the woken tasks.
.. function:: schedule(t::Task, [val]; error=false)
Add a task to the scheduler's queue. This causes the task to run constantly
when the system is otherwise idle, unless the task performs a blocking
operation such as ``wait``.
If a second argument is provided, it will be passed to the task (via the
return value of ``yieldto``) when it runs again. If ``error`` is true,
the value is raised as an exception in the woken task.
.. function:: @schedule
Wrap an expression in a Task and add it to the scheduler's queue.
.. function:: @task
Wrap an expression in a Task executing it, and return the Task. This
only creates a task, and does not run it.
.. function:: sleep(seconds)
Block the current task for a specified number of seconds. The minimum sleep
time is 1 millisecond or input of ``0.001``.
General Parallel Computing Support
----------------------------------
.. function:: addprocs(n; cman::ClusterManager=LocalManager()) -> List of process identifiers
``addprocs(4)`` will add 4 processes on the local machine. This can be used to take
advantage of multiple cores.
Keyword argument ``cman`` can be used to provide a custom cluster manager to start workers.
For example Beowulf clusters are supported via a custom cluster manager implemented
in package ``ClusterManagers``.
See the documentation for package ``ClusterManagers`` for more information on how to
write a custom cluster manager.
.. function:: addprocs(machines; tunnel=false, dir=JULIA_HOME, sshflags::Cmd=``) -> List of process identifiers
Add processes on remote machines via SSH.
Requires julia to be installed in the same location on each node, or to be available via a shared file system.
``machines`` is a vector of host definitions of the form ``[user@]host[:port] [bind_addr]``. ``user`` defaults
to current user, ``port`` to the standard ssh port. Optionally, in case of multi-homed hosts, ``bind_addr``
may be used to explicitly specify an interface.
Keyword arguments:
``tunnel`` : if ``true`` then SSH tunneling will be used to connect to the worker.
``dir`` : specifies the location of the julia binaries on the worker nodes.
``sshflags`` : specifies additional ssh options, e.g. :literal:`sshflags=\`-i /home/foo/bar.pem\`` .
.. function:: nprocs()
Get the number of available processes.
.. function:: nworkers()
Get the number of available worker processes. This is one less than nprocs(). Equal to nprocs() if nprocs() == 1.
.. function:: procs()
Returns a list of all process identifiers.
.. function:: workers()
Returns a list of all worker process identifiers.
.. function:: rmprocs(pids...)
Removes the specified workers.
.. function:: interrupt([pids...])
Interrupt the current executing task on the specified workers. This is
equivalent to pressing Ctrl-C on the local machine. If no arguments are given,
all workers are interrupted.
.. function:: myid()
Get the id of the current process.
.. function:: pmap(f, lsts...; err_retry=true, err_stop=false)
Transform collections ``lsts`` by applying ``f`` to each element in parallel.
If ``nprocs() > 1``, the calling process will be dedicated to assigning tasks.
All other available processes will be used as parallel workers.
If ``err_retry`` is true, it retries a failed application of ``f`` on a different worker.
If ``err_stop`` is true, it takes precedence over the value of ``err_retry`` and ``pmap`` stops execution on the first error.
.. function:: remotecall(id, func, args...)
Call a function asynchronously on the given arguments on the specified process. Returns a ``RemoteRef``.
.. function:: wait([x])
Block the current task until some event occurs, depending on the type
of the argument:
* ``RemoteRef``: Wait for a value to become available for the specified remote reference.
* ``Condition``: Wait for ``notify`` on a condition.
* ``Process``: Wait for a process or process chain to exit. The ``exitcode`` field of a process can be used to determine success or failure.
* ``Task``: Wait for a ``Task`` to finish, returning its result value.
* ``RawFD``: Wait for changes on a file descriptor (see `poll_fd` for keyword arguments and return code)
If no argument is passed, the task blocks for an undefined period. If the task's
state is set to ``:waiting``, it can only be restarted by an explicit call to
``schedule`` or ``yieldto``. If the task's state is ``:runnable``, it might be
restarted unpredictably.
Often ``wait`` is called within a ``while`` loop to ensure a waited-for condition
is met before proceeding.
.. function:: fetch(RemoteRef)
Wait for and get the value of a remote reference.
.. function:: remotecall_wait(id, func, args...)
Perform ``wait(remotecall(...))`` in one message.
.. function:: remotecall_fetch(id, func, args...)
Perform ``fetch(remotecall(...))`` in one message.
.. function:: put!(RemoteRef, value)
Store a value to a remote reference. Implements "shared queue of length 1" semantics: if a value is already present, blocks until the value is removed with ``take!``. Returns its first argument.
.. function:: take!(RemoteRef)
Fetch the value of a remote reference, removing it so that the reference is empty again.
.. function:: isready(r::RemoteRef)
Determine whether a ``RemoteRef`` has a value stored to it. Note that this function
can cause race conditions, since by the time you receive its result it may
no longer be true. It is recommended that this function only be used on a
``RemoteRef`` that is assigned once.
If the argument ``RemoteRef`` is owned by a different node, this call will block to
wait for the answer. It is recommended to wait for ``r`` in a separate task instead,
or to use a local ``RemoteRef`` as a proxy::
rr = RemoteRef()
@async put!(rr, remotecall_fetch(p, long_computation))
isready(rr) # will not block
.. function:: RemoteRef()
Make an uninitialized remote reference on the local machine.
.. function:: RemoteRef(n)
Make an uninitialized remote reference on process ``n``.
.. function:: timedwait(testcb::Function, secs::Float64; pollint::Float64=0.1)
Waits till ``testcb`` returns ``true`` or for ``secs``` seconds, whichever is earlier.
``testcb`` is polled every ``pollint`` seconds.
.. function:: @spawn
Execute an expression on an automatically-chosen process, returning a
``RemoteRef`` to the result.
.. function:: @spawnat
Accepts two arguments, ``p`` and an expression, and runs the expression
asynchronously on process ``p``, returning a ``RemoteRef`` to the result.
.. function:: @fetch
Equivalent to ``fetch(@spawn expr)``.
.. function:: @fetchfrom
Equivalent to ``fetch(@spawnat p expr)``.
.. function:: @async
Schedule an expression to run on the local machine, also adding it to the
set of items that the nearest enclosing ``@sync`` waits for.
.. function:: @sync
Wait until all dynamically-enclosed uses of ``@async``, ``@spawn``,
``@spawnat`` and ``@parallel`` are complete.
.. function:: @parallel
A parallel for loop of the form ::
@parallel [reducer] for var = range
body
end
The specified range is partitioned and locally executed across all workers.
In case an optional reducer function is specified, @parallel performs local
reductions on each worker with a final reduction on the calling process.
Note that without a reducer function, @parallel executes asynchronously,
i.e. it spawns independent tasks on all available workers and returns
immediately without waiting for completion. To wait for completion, prefix
the call with ``@sync``, like ::
@sync @parallel for var = range
body
end
Distributed Arrays
------------------
.. function:: DArray(init, dims, [procs, dist])
Construct a distributed array. The parameter ``init`` is a function that accepts a tuple of index ranges.
This function should allocate a local chunk of the distributed array and initialize it for the specified indices.
``dims`` is the overall size of the distributed array. ``procs`` optionally specifies a vector of process IDs to use.
If unspecified, the array is distributed over all worker processes only. Typically, when runnning in distributed mode,
i.e., ``nprocs() > 1``, this would mean that no chunk of the distributed array exists on the process hosting the
interactive julia prompt.
``dist`` is an integer vector specifying how many chunks the distributed array should be divided into in each dimension.
For example, the ``dfill`` function that creates a distributed array and fills it with a value ``v`` is implemented as:
``dfill(v, args...) = DArray(I->fill(v, map(length,I)), args...)``
.. function:: dzeros(dims, ...)
Construct a distributed array of zeros. Trailing arguments are the same as those accepted by :func:`DArray`.
.. function:: dones(dims, ...)
Construct a distributed array of ones. Trailing arguments are the same as those accepted by :func:`DArray`.
.. function:: dfill(x, dims, ...)
Construct a distributed array filled with value ``x``. Trailing arguments are the same as those accepted by :func:`DArray`.
.. function:: drand(dims, ...)
Construct a distributed uniform random array. Trailing arguments are the same as those accepted by :func:`DArray`.
.. function:: drandn(dims, ...)
Construct a distributed normal random array. Trailing arguments are the same as those accepted by :func:`DArray`.
.. function:: distribute(a)
Convert a local array to distributed.
.. function:: localpart(d)
Get the local piece of a distributed array. Returns an empty array if no local part exists on the calling process.
.. function:: localindexes(d)
A tuple describing the indexes owned by the local process. Returns a tuple with empty ranges
if no local part exists on the calling process.
.. function:: procs(d)
Get the vector of processes storing pieces of ``d``.
Shared Arrays (Experimental, UNIX-only feature)
-----------------------------------------------
.. function:: SharedArray(T::Type, dims::NTuple; init=false, pids=Int[])
Construct a SharedArray of a bitstype ``T`` and size ``dims`` across the processes
specified by ``pids`` - all of which have to be on the same host.
If ``pids`` is left unspecified, the shared array will be mapped across all workers
on the current host.
If an ``init`` function of the type ``initfn(S::SharedArray)`` is specified,
it is called on all the participating workers.
.. function:: procs(S::SharedArray)
Get the vector of processes that have mapped the shared array
.. function:: sdata(S::SharedArray)
Returns the actual ``Array`` object backing ``S``
.. function:: indexpids(S::SharedArray)
Returns the index of the current worker into the ``pids`` vector, i.e., the list of workers mapping
the SharedArray
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