Revision 82782ca61ae1180bbbcf2353016ff2a123971319 authored by Isaac Overcast on 08 May 2021, 23:57:05 UTC, committed by Isaac Overcast on 08 May 2021, 23:57:05 UTC
1 parent 980f41e
README.rst
*ipyrad*: interactive assembly and analysis of RAD-seq data sets
--------------------------------------------------------------
Welcome to ipyrad, an interactive toolkit for assembly and analysis of
restriction-site associated genomic data sets (e.g., RAD, ddRAD, GBS)
for population genetic and phylogenetic studies.
Documentation
---------
Full documentation is available here (`<http://ipyrad.readthedocs.io>`_),
where you will find installation instructions, example tutorials, and a full user guide.
Quick Install
------------
ipyrad is available through the Python package installer `conda` with all dependencies included.
If you have `conda` installed you can simply run:
conda install ipyrad -c conda-forge -c bioconda
If you do not have `conda` installed then you will enjoy our
`complete installation instructions <http://ipyrad.readthedocs.io/installation.html>`_.
Getting Help
------------
Join the ipyrad gitter channel and ask a question, request a feature, or flame the developers:
.. image:: https://badges.gitter.im/Join%20Chat.svg
:alt: Join the chat at https://gitter.im/dereneaton/ipyrad
:target: https://gitter.im/dereneaton/ipyrad?utm_source=badge&utm_medium=badge&utm_campaign=pr-badge&utm_content=badge
License
-------
GPLv3
Cite the Manuscript
-------------------
Eaton DAR & Overcast I. "ipyrad: Interactive assembly and analysis of RADseq datasets." Bioinformatics (2020).
Contributors
------------
+ `Deren Eaton <deren.eaton@yale.edu>`_
+ `Isaac Overcast <isaac.overcast@gmail.com>`_
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