8678e0d | Alexey Sergushichev | 18 December 2018, 02:04:45 UTC | Rasterized heatmap in gsea plot | 25 December 2018, 16:46:55 UTC |
3900a22 | Alexey Sergushichev | 17 December 2018, 21:32:23 UTC | slack notification | 25 December 2018, 16:46:55 UTC |
04b6baa | petrovich | 17 December 2018, 13:50:33 UTC | Update JS | 25 December 2018, 16:46:55 UTC |
75bdfdc | petrovich | 17 December 2018, 13:18:07 UTC | Empty annotationDB fix | 25 December 2018, 16:46:55 UTC |
c8a94b9 | petrovich | 13 December 2018, 19:16:42 UTC | Fix the build | 25 December 2018, 16:46:55 UTC |
17fc2a7 | petrovich | 13 December 2018, 19:09:43 UTC | Update JS | 25 December 2018, 16:46:55 UTC |
8cd56d2 | petrovich | 13 December 2018, 19:08:55 UTC | Implemented custom annotation colors in GSEA plot | 25 December 2018, 16:46:55 UTC |
9f60f46 | Vladislav Kamenev | 12 December 2018, 16:29:12 UTC | Update JS | 25 December 2018, 16:46:55 UTC |
2ae6ee6 | Vladislav Kamenev | 12 December 2018, 16:26:50 UTC | GSEA plot external pallete | 25 December 2018, 16:46:55 UTC |
4d074e0 | Vladislav Kamenev | 12 December 2018, 11:38:11 UTC | Speed up annotationDB initialization | 25 December 2018, 16:46:55 UTC |
0c8535c | Vladislav Kamenev | 07 December 2018, 15:05:41 UTC | Update JS | 25 December 2018, 16:46:55 UTC |
c22ce42 | Vladislav Kamenev | 05 December 2018, 15:44:20 UTC | Update JS | 25 December 2018, 16:46:55 UTC |
7ae2fab | petrovich | 04 December 2018, 22:01:34 UTC | User configurable fields for AnnotationDB | 25 December 2018, 16:46:54 UTC |
e47a7ba | Vladislav Kamenev | 03 December 2018, 09:59:39 UTC | Fix annotationDB meta function | 25 December 2018, 16:46:54 UTC |
f12cae7 | Vladislav Kamenev | 03 December 2018, 09:47:20 UTC | Added AnnotationDbi as dependency | 25 December 2018, 16:46:54 UTC |
cdcc838 | Vladislav Kamenev | 30 November 2018, 17:00:34 UTC | AnnotationDB convert implemented | 25 December 2018, 16:46:54 UTC |
6fb55d9 | Alexey Sergushichev | 28 November 2018, 20:08:07 UTC | keeping experimentData in loadFromARCHS4 | 25 December 2018, 16:46:54 UTC |
83342cc | Vladislav Kamenev | 28 November 2018, 15:58:01 UTC | Fix the build | 25 December 2018, 16:46:54 UTC |
25fc329 | Vladislav Kamenev | 28 November 2018, 14:45:01 UTC | Revert | 25 December 2018, 16:46:54 UTC |
edde57b | Vladislav Kamenev | 28 November 2018, 14:18:52 UTC | temporary test fix | 25 December 2018, 16:46:54 UTC |
58b38e7 | Vladislav Kamenev | 28 November 2018, 13:39:12 UTC | Master GEOquery in image | 25 December 2018, 16:46:54 UTC |
f03e1d7 | Vladislav Kamenev | 23 November 2018, 10:55:53 UTC | Fixed TYPO in dockerfile | 25 December 2018, 16:46:54 UTC |
010d176 | Vladislav Kamenev | 21 November 2018, 15:58:49 UTC | Try to install latest geoquery via git clone | 25 December 2018, 16:46:54 UTC |
4faa799 | Vladislav Kamenev | 21 November 2018, 15:17:55 UTC | Docker build context change | 25 December 2018, 16:46:54 UTC |
fd74838 | Vladislav Kamenev | 19 November 2018, 09:44:11 UTC | Added my geoquery to dockerfile | 25 December 2018, 16:46:54 UTC |
5a2e1e6 | Vladislav Kamenev | 19 November 2018, 09:41:48 UTC | Update JS | 25 December 2018, 16:46:54 UTC |
255cdf4 | Vladislav Kamenev | 16 November 2018, 16:02:26 UTC | Expirement data implemented in GDS, createES | 25 December 2018, 16:46:54 UTC |
035ee81 | Vladislav Kamenev | 16 November 2018, 16:01:36 UTC | Added gfortran explicitly | 25 December 2018, 16:46:54 UTC |
21165a5 | Vladislav Kamenev | 15 November 2018, 16:45:14 UTC | Pass experimentData to frontend | 25 December 2018, 16:46:54 UTC |
cf716a8 | Vladislav Kamenev | 15 November 2018, 16:44:53 UTC | Optimize GDS parsing | 25 December 2018, 16:46:53 UTC |
822def2 | Vladislav Kamenev | 09 November 2018, 14:20:59 UTC | Update JS. Fixed bug on landing page. Implemented dataset history | 25 December 2018, 16:46:53 UTC |
8d841b2 | Vladislav Kamenev | 07 November 2018, 15:15:21 UTC | Cache fixes | 25 December 2018, 16:46:53 UTC |
4a542f9 | Vladislav Kamenev | 07 November 2018, 12:24:52 UTC | Structured caching GEO WIP. GDS done | 25 December 2018, 16:46:53 UTC |
2c34fff | Vladislav Kamenev | 02 November 2018, 15:13:39 UTC | Structured caching GEO WIP. GSE done | 25 December 2018, 16:46:53 UTC |
001859a | Vladislav Kamenev | 31 October 2018, 12:50:03 UTC | ARCHS4 downloader in R | 25 December 2018, 16:46:53 UTC |
5735a1c | Vladislav Kamenev | 29 October 2018, 16:55:09 UTC | ARCHS4 is now subfolder in cache | 25 December 2018, 16:46:53 UTC |
d85021b | Vladislav Kamenev | 29 October 2018, 15:14:59 UTC | ARCHS4 fixed NA in genes | 25 December 2018, 16:46:53 UTC |
1346f1b | Vladislav Kamenev | 26 October 2018, 15:58:50 UTC | Added docker-compose. ARCHS4 in readme | 25 December 2018, 16:46:53 UTC |
8906778 | Alexey Sergushichev | 12 December 2018, 15:42:21 UTC | Returning of fortran | 12 December 2018, 15:42:21 UTC |
25214e0 | Alexey Sergushichev | 11 December 2018, 21:48:19 UTC | metadata update | 11 December 2018, 21:48:19 UTC |
75cb225 | Alexey Sergushichev | 11 December 2018, 21:47:04 UTC | Fix #99 | 11 December 2018, 21:47:04 UTC |
c1069ff | vobencha | 30 October 2018, 15:54:39 UTC | bump x.y.z versions to odd y after creation of RELEASE_3_8 branch | 30 October 2018, 15:54:39 UTC |
a372342 | vobencha | 30 October 2018, 15:42:08 UTC | bump x.y.z versions to even y prior to creation of RELEASE_3_8 branch | 30 October 2018, 15:42:08 UTC |
cf8e555 | Vladislav Kamenev | 29 October 2018, 14:31:24 UTC | Updated tutorial | 29 October 2018, 14:31:24 UTC |
5b8431b | Vladislav Kamenev | 26 October 2018, 11:45:43 UTC | 1.1.6 | 29 October 2018, 13:01:51 UTC |
1c57067 | Vladislav Kamenev | 26 October 2018, 09:43:33 UTC | Travis fortran workaround | 26 October 2018, 11:35:45 UTC |
5532378 | Vladislav Kamenev | 25 October 2018, 15:04:38 UTC | Adjust tool picture fixed | 26 October 2018, 11:35:45 UTC |
8ecdb00 | petrovich | 21 October 2018, 23:26:22 UTC | Update JS | 26 October 2018, 11:35:45 UTC |
b70196b | petrovich | 21 October 2018, 23:13:42 UTC | Fix log in adjust | 26 October 2018, 11:35:45 UTC |
c294c2e | petrovich | 21 October 2018, 03:32:05 UTC | R 3.5 in docker | 26 October 2018, 11:35:45 UTC |
b0922d4 | Alexey Sergushichev | 20 October 2018, 13:07:32 UTC | version bump to 1.1.5 | 20 October 2018, 13:07:32 UTC |
0d6a5c0 | Alexey Sergushichev | 20 October 2018, 13:07:06 UTC | Updated readme | 20 October 2018, 13:07:06 UTC |
85f9f43 | Alexey Sergushichev | 20 October 2018, 13:01:07 UTC | Merge branch 'master' of git.bioconductor.org:packages/phantasus | 20 October 2018, 13:01:07 UTC |
3c7eb69 | Vladislav Kamenev | 20 October 2018, 12:05:57 UTC | Merge pull request #94 from ctlab/develop Develop | 20 October 2018, 12:05:57 UTC |
3b6d9b9 | Vladislav Kamenev | 18 October 2018, 16:22:57 UTC | BiocCheck fixes | 19 October 2018, 10:45:50 UTC |
202dece | Vladislav Kamenev | 18 October 2018, 12:08:32 UTC | Update roxygen annotation | 18 October 2018, 12:08:32 UTC |
8afaec8 | Vladislav Kamenev | 18 October 2018, 11:54:31 UTC | Update JS. Merged PCA Plot latest fixes | 18 October 2018, 11:54:31 UTC |
0dc61da | petrovich | 17 October 2018, 01:39:30 UTC | Some cleanup | 17 October 2018, 01:39:30 UTC |
6f409af | petrovich | 17 October 2018, 01:38:00 UTC | Update JS | 17 October 2018, 01:38:00 UTC |
4f02356 | Vladislav Kamenev | 16 October 2018, 14:18:36 UTC | Merge pull request #93 from ctlab/appveyor Windows fix. | 16 October 2018, 14:18:36 UTC |
f96cbfa | Vladislav Kamenev | 15 October 2018, 09:33:17 UTC | Appveyor test | 16 October 2018, 13:45:33 UTC |
4b9f83e | Vladislav Kamenev | 10 October 2018, 15:01:33 UTC | 1.1.4 RC2 | 10 October 2018, 15:01:33 UTC |
af9d405 | Vladislav Kamenev | 10 October 2018, 11:18:25 UTC | Update JS. Fix probe, fix filters | 10 October 2018, 11:18:25 UTC |
2650f63 | petrovich | 06 October 2018, 13:03:58 UTC | Update JS. Test fix | 06 October 2018, 13:03:58 UTC |
01a9bfc | Vladislav Kamenev | 05 October 2018, 14:52:58 UTC | RC2. GSEA Plot fixes. Race state fixed. PCA Plot revamped | 05 October 2018, 14:52:58 UTC |
767cc8d | Vladislav Kamenev | 05 October 2018, 11:58:05 UTC | One ES -> One Session -> One happy frontend | 05 October 2018, 11:58:55 UTC |
27213a8 | Alexey Sergushichev | 04 October 2018, 16:43:35 UTC | id column is preserved in GDS datasets | 04 October 2018, 16:43:35 UTC |
82b5765 | Vladislav Kamenev | 28 September 2018, 17:30:36 UTC | Merge pull request #91 from ctlab/develop RC 1.1.4 | 28 September 2018, 17:30:36 UTC |
cd933d1 | Vladislav Kamenev | 28 September 2018, 17:21:29 UTC | RC | 28 September 2018, 17:27:32 UTC |
32ea536 | petrovich | 23 September 2018, 12:26:24 UTC | Update JS. PCA plot sort-stable fix | 23 September 2018, 12:26:24 UTC |
05cb2ad | Vladislav Kamenev | 17 September 2018, 14:55:56 UTC | Update JS. Annotation dataset improvement | 17 September 2018, 14:55:56 UTC |
7679418 | Vladislav Kamenev | 17 September 2018, 13:05:51 UTC | Collapse dataset fixes | 17 September 2018, 13:27:22 UTC |
be43626 | Vladislav Kamenev | 17 September 2018, 11:13:29 UTC | Collapse dataset working candidate | 17 September 2018, 11:13:29 UTC |
deac377 | petrovich | 13 September 2018, 02:43:13 UTC | CR collapseDataset | 13 September 2018, 02:51:47 UTC |
94e82b8 | Vladislav Kamenev | 12 September 2018, 12:45:32 UTC | Removed junk | 12 September 2018, 12:45:32 UTC |
1993293 | Vladislav Kamenev | 12 September 2018, 12:39:01 UTC | collapseDataset + tests implemented | 12 September 2018, 12:39:01 UTC |
f7a87c5 | Alexey Sergushichev | 11 September 2018, 15:30:01 UTC | fixes read.gct missing last row/column annotations | 11 September 2018, 15:30:01 UTC |
1366c31 | Alexey Sergushichev | 11 September 2018, 14:58:16 UTC | Merge branch 'develop' of github.com:ctlab/phantasus into develop | 11 September 2018, 14:58:16 UTC |
e93cb86 | Alexey Sergushichev | 11 September 2018, 14:57:51 UTC | Adding quiet option for servePhantasus | 11 September 2018, 14:57:51 UTC |
cc1ee9d | Vladislav Kamenev | 10 September 2018, 16:43:35 UTC | Collapse candidate | 11 September 2018, 14:02:51 UTC |
f0693d9 | Vladislav Kamenev | 10 September 2018, 12:24:36 UTC | Update JS. New tutorial | 10 September 2018, 12:24:36 UTC |
27fbda8 | Vladislav Kamenev | 08 September 2018, 23:34:46 UTC | Update tutorial | 08 September 2018, 23:34:46 UTC |
06931f9 | petrovich | 06 September 2018, 23:33:28 UTC | Update JS. TCGA datasets | 06 September 2018, 23:33:28 UTC |
7c63c4e | LiNk-NY | 06 September 2018, 15:52:28 UTC | additional updates from BiocInstaller to BiocManager | 06 September 2018, 15:52:28 UTC |
db005e4 | Vladislav Kamenev | 06 September 2018, 09:14:16 UTC | Update JS | 06 September 2018, 09:14:16 UTC |
2c001b6 | Vladislav Kamenev | 03 September 2018, 14:04:01 UTC | UpdateJS. Rename column | 03 September 2018, 14:04:01 UTC |
a3a0c44 | Vladislav Kamenev | 03 September 2018, 14:03:29 UTC | Rename column implemented | 03 September 2018, 14:03:29 UTC |
4f0e68f | Vladislav Kamenev | 03 September 2018, 10:39:01 UTC | Update JS | 03 September 2018, 10:39:01 UTC |
211f569 | Vladislav Kamenev | 03 September 2018, 10:38:19 UTC | Annotation name implemented | 03 September 2018, 10:38:19 UTC |
c4ae3a7 | petrovich | 02 September 2018, 21:10:00 UTC | Update JS | 02 September 2018, 21:10:00 UTC |
d79b9ae | petrovich | 02 September 2018, 21:08:51 UTC | Implemented onePlusLog2 operation in adjustDataset | 02 September 2018, 21:08:51 UTC |
7ccb9f0 | petrovich | 31 August 2018, 01:43:13 UTC | Update JS. Adjust mirroring disabled in datasets without session | 31 August 2018, 01:43:13 UTC |
93dc3bd | petrovich | 31 August 2018, 01:30:28 UTC | Update JS. Adjust mirroring final | 31 August 2018, 01:30:28 UTC |
95ed673 | petrovich | 30 August 2018, 23:03:32 UTC | Fixed and added test | 30 August 2018, 23:03:32 UTC |
b908239 | petrovich | 30 August 2018, 06:18:50 UTC | Filter pData fix. Vector length conflict | 30 August 2018, 06:18:50 UTC |
9277ad4 | petrovich | 30 August 2018, 06:06:25 UTC | Update JS. Adjust mirroring implemented | 30 August 2018, 06:06:25 UTC |
253a622 | petrovich | 30 August 2018, 06:04:26 UTC | Adjust mirroring fix. Logarithm on negatives | 30 August 2018, 06:04:26 UTC |
26733f8 | petrovich | 30 August 2018, 03:44:23 UTC | Fix phenoData filter | 30 August 2018, 03:44:23 UTC |
2172598 | petrovich | 26 August 2018, 18:10:06 UTC | Adjust mirring | 29 August 2018, 02:19:37 UTC |
374e842 | petrovich | 21 August 2018, 13:45:55 UTC | Update JS. Fix PhantomJS testing | 21 August 2018, 13:45:55 UTC |