Revision 91b598f2b9204a0ac2c4171b160063df78ab64cb authored by Alex Nitz on 06 November 2020, 21:00:26 UTC, committed by GitHub on 06 November 2020, 21:00:26 UTC
* easier to make workflow * add pycbc inference monitor script * Update pycbc_inference_monitor * fixes
1 parent ab5cae5
losc.py
# Copyright (C) 2017 Alex Nitz
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 3 of the License, or (at your
# option) any later version.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Generals
# Public License for more details.
#
# You should have received a copy of the GNU General Public License along
# with this program; if not, write to the Free Software Foundation, Inc.,
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
"""
This modules contains functions for getting data from the LOSC
"""
from astropy.utils.data import download_file
_losc_url = "https://www.gw-openscience.org/archive/links/%s/%s/%s/%s/json/"
def get_run(time):
if 1164556817 <= time <= 1187733618:
return 'O2_16KHZ_R1'
if 1126051217 <= time <= 1137254417:
return 'O1'
elif 815011213 <= time <= 875318414:
return 'S5'
elif 930787215 <= time <= 971568015:
return 'S6'
else:
raise ValueError('Time %s not available in a public dataset' % time)
def _get_channel(time):
if 1164556817 <= time <= 1187733618:
return 'GWOSC-16KHZ_R1_STRAIN'
else:
return 'LOSC-STRAIN'
def losc_frame_json(ifo, start_time, end_time):
""" Get the information about the public data files in a duration of time
Parameters
----------
ifo: str
The name of the IFO to find the information about.
start_time: int
The gps time in GPS seconds
end_time: int
The end time in GPS seconds
Returns
-------
info: dict
A dictionary containing information about the files that span the
requested times.
"""
import json
try:
from urllib.request import urlopen
except ImportError: # python < 3
from urllib import urlopen
run = get_run(start_time)
run2 = get_run(end_time)
if run != run2:
raise ValueError('Spanning multiple runs is not currently supported.'
'You have requested data that uses '
'both %s and %s' % (run, run2))
url = _losc_url % (run, ifo, int(start_time), int(end_time))
try:
return json.loads(urlopen(url).read().decode())
except Exception as e:
print(e)
raise ValueError('Failed to find gwf files for '
'ifo=%s, run=%s, between %s-%s' % (ifo, run, start_time, end_time))
def losc_frame_urls(ifo, start_time, end_time):
""" Get a list of urls to losc frame files
Parameters
----------
ifo: str
The name of the IFO to find the information about.
start_time: int
The gps time in GPS seconds
end_time: int
The end time in GPS seconds
Returns
-------
frame_files: list
A dictionary containing information about the files that span the
requested times.
"""
data = losc_frame_json(ifo, start_time, end_time)['strain']
return [d['url'] for d in data if d['format'] == 'gwf']
def read_frame_losc(channels, start_time, end_time):
""" Read channels from losc data
Parameters
----------
channels: str or list
The channel name to read or list of channel names.
start_time: int
The gps time in GPS seconds
end_time: int
The end time in GPS seconds
Returns
-------
ts: TimeSeries
Returns a timeseries or list of timeseries with the requested data.
"""
from pycbc.frame import read_frame
if not isinstance(channels, list):
channels = [channels]
ifos = [c[0:2] for c in channels]
urls = {}
for ifo in ifos:
urls[ifo] = losc_frame_urls(ifo, start_time, end_time)
if len(urls[ifo]) == 0:
raise ValueError("No data found for %s so we "
"can't produce a time series" % ifo)
fnames = {ifo:[] for ifo in ifos}
for ifo in ifos:
for url in urls[ifo]:
fname = download_file(url, cache=True)
fnames[ifo].append(fname)
ts = [read_frame(fnames[channel[0:2]], channel,
start_time=start_time, end_time=end_time) for channel in channels]
if len(ts) == 1:
return ts[0]
else:
return ts
def read_strain_losc(ifo, start_time, end_time):
""" Get the strain data from the LOSC data
Parameters
----------
ifo: str
The name of the IFO to read data for. Ex. 'H1', 'L1', 'V1'
start_time: int
The gps time in GPS seconds
end_time: int
The end time in GPS seconds
Returns
-------
ts: TimeSeries
Returns a timeseries with the strain data.
"""
channel = _get_channel(start_time)
return read_frame_losc('%s:%s' % (ifo, channel), start_time, end_time)
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