https://github.com/stan-dev/example-models
Revision 945e4c69971ed73ded8668418fe9c286f90c89cb authored by jrnold on 14 August 2016, 21:04:28 UTC, committed by jrnold on 14 August 2016, 21:04:28 UTC
1 parent ec6d329
Tip revision: 945e4c69971ed73ded8668418fe9c286f90c89cb authored by jrnold on 14 August 2016, 21:04:28 UTC
Remove incomplete Nile example from misc/dlm
Remove incomplete Nile example from misc/dlm
Tip revision: 945e4c6
hiv.data.R
"N" <-
369
"J" <-
84
treatment <-
c(1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1,
1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1,
1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1,
1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1,
1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1,
1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1,
1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1,
1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1,
1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1,
1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1,
1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1,
1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1,
1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1,
1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1,
1)
"time" <-
c(0, 0.5583333, 0.7883333, 1.4208333, 1.9383333, 0,
0.23, 0.4791667, 0.7283333, 0.9583333, 1.1883333, 0.23,
0.46, 0.7091667, 0.9583333, 1.1883333, 0, 0.5941667,
0.8241667, 0, 0.2491667, 0.69, 0.92, 1.15,
1.3716667, 0, 0.4983333, 0.7283333, 0.9608333, 0,
0.4983333, 0.7616667, 1.0108333, 1.265, 1.495, 0,
0.2133333, 0.4291667, 0.6733333, 0.9033333, 1.1358333, 0,
0.4791667, 0, 0.7008333, 0, 0.6516667, 1.0925,
1.35, 1.5908333, 0, 0.2408333, 0.46, 0.7008333,
0.9333333, 1.2016667, 1.47, 0, 0.2575, 0,
0.515, 0.7258333, 0, 0.2575, 0.5041667, 0.7258333,
0.9641667, 1.1966667, 1.4975, 0, 0.2433333, 0.4733333,
0, 0.4791667, 0.7116667, 0.9416667, 1.1716667, 1.4016667,
0, 0.2491667, 0.5008333, 0.725, 0.955, 1.2041667,
1.4258333, 0, 0.2458333, 0.4758333, 0.7058333, 0.9358333,
1.1775, 1.415, 0, 0.2541667, 0.4816667, 0.725,
0.9766667, 0, 0.2275, 0.4575, 0.685, 0.9175,
1.1475, 1.3583333, 0, 0.2358333, 0.4658333, 0.715,
0.9391667, 1.3908333, 0, 0.2491667, 0.4875, 0.7091667,
0.9391667, 1.1691667, 1.3991667, 0, 0.2383333, 0.465,
0.6925, 0.9416667, 1.1575, 1.3875, 0, 0.2491667,
0.4708333, 0.7008333, 0.9308333, 0, 0.23, 0.5175,
0.805, 1.0925, 0, 0.46, 0.69, 0.9391667,
1.1883333, 0, 0.23, 0.46, 0.69, 1.3416667,
0, 0.23, 0.46, 0.69, 0.92, 1.1883333,
1.4183333, 0, 0.2491667, 0.4791667, 0.7475, 0.9966667,
0, 0.2491667, 0.46, 0.69, 0, 0.9391667,
1.47, 0, 0.23, 0, 0, 0.2566667,
0.5141667, 1.2258333, 0, 0.2491667, 0, 0.2166667,
0.4816667, 0.7475, 0.9966667, 1.2316667, 1.4925, 0,
0.23, 0.4983333, 0.7633333, 1.0125, 1.2616667, 1.5,
0, 0.3583333, 0.7583333, 1.3991667, 1.9083333, 0,
0.3316667, 0, 0.2458333, 0.495, 0.7441667, 0.9825,
1.4725, 0, 0.2491667, 0.4791667, 0.7283333, 1.1883333,
0, 0.3066667, 0.5366667, 1.3991667, 0, 0.4983333,
1.035, 1.265, 0, 0.2358333, 0.4766667, 0.7066667,
0.9775, 1.2325, 1.4625, 0, 0.2266667, 0.4733333,
0.7091667, 0.9525, 1.2016667, 1.4566667, 0, 0,
0.2516667, 0.485, 0.7366667, 1.0025, 1.2483333, 1.4816667,
0, 0.2358333, 0.4625, 0.7341667, 0.9775, 1.2075,
1.4458333, 0, 0.2241667, 0.4758333, 0.7058333, 0.9358333,
1.1766667, 1.4125, 0, 0.2441667, 0.5008333, 0.7475,
0.9775, 1.2291667, 0, 0.2516667, 0.4841667, 0.7175,
0.9475, 1.1883333, 0, 0.23, 0.46, 0,
0.2458333, 0.4816667, 0.7116667, 0.955, 0, 0.23,
0.4766667, 0, 0.2325, 0, 0.2875, 0.8625,
0, 0.2491667, 0, 0.2491667, 0.5175, 0.7666667,
0.78, 1.0866667, 0, 0.6708333, 0, 0,
0.46, 0.7283333, 0.9775, 1.1883333, 0, 0.2491667,
0.4791667, 0.7091667, 1.2458333, 0, 0.2491667, 0.9008333,
1.1308333, 0, 0.2216667, 0.4566667, 0, 0.3641667,
0.7091667, 0.9583333, 1.1883333, 1.4241667, 0, 0.2266667,
0.9358333, 1.1658333, 1.3958333, 0, 0.4983333, 0.7666667,
1.0541667, 1.5333333, 0, 0.2516667, 0.4791667, 0.72,
0.9391667, 1.1716667, 1.41, 0, 0.23, 0.46,
0.6983333, 1.1583333, 0, 0.23, 0.46, 0.69,
0.92, 1.1525, 1.38, 0, 0.23, 0.46,
0.7033333, 1.1608333, 0, 0.23, 0.4741667, 0.6708333,
0, 0.2566667, 0.6841667, 0, 0.2358333, 0.6958333,
0, 0.23, 1.2041667, 0, 0.2325, 0,
0.23, 0.4875, 0.7308333, 0, 0.2491667, 0,
0, 0.2458333, 0)
"person" <-
c(1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 3, 3, 3, 3,
3, 4, 4, 4, 5, 5, 5, 5, 5, 5, 6, 6, 6, 6, 7,
7, 7, 7, 7, 7, 8, 8, 8, 8, 8, 8, 9, 9, 10, 10,
11, 11, 11, 11, 11, 12, 12, 12, 12, 12, 12, 12, 13, 13, 14,
14, 14, 15, 15, 15, 15, 15, 15, 15, 16, 16, 16, 17, 17, 17,
17, 17, 17, 18, 18, 18, 18, 18, 18, 18, 19, 19, 19, 19, 19,
19, 19, 20, 20, 20, 20, 20, 21, 21, 21, 21, 21, 21, 21, 22,
22, 22, 22, 22, 22, 23, 23, 23, 23, 23, 23, 23, 24, 24, 24,
24, 24, 24, 24, 25, 25, 25, 25, 25, 27, 27, 27, 27, 27, 28,
28, 28, 28, 28, 29, 29, 29, 29, 29, 30, 30, 30, 30, 30, 30,
30, 31, 31, 31, 31, 31, 32, 32, 32, 32, 33, 33, 33, 34, 34,
35, 36, 36, 36, 36, 37, 37, 38, 38, 38, 38, 38, 38, 38, 39,
39, 39, 39, 39, 39, 39, 40, 40, 40, 40, 40, 41, 41, 42, 42,
42, 42, 42, 42, 43, 43, 43, 43, 43, 44, 44, 44, 44, 45, 45,
45, 45, 46, 46, 46, 46, 46, 46, 46, 47, 47, 47, 47, 47, 47,
47, 48, 49, 49, 49, 49, 49, 49, 49, 50, 50, 50, 50, 50, 50,
50, 51, 51, 51, 51, 51, 51, 51, 52, 52, 52, 52, 52, 52, 53,
53, 53, 53, 53, 53, 54, 54, 54, 55, 55, 55, 55, 55, 56, 56,
56, 57, 57, 58, 58, 58, 59, 59, 60, 60, 60, 60, 61, 61, 62,
62, 63, 64, 64, 64, 64, 64, 65, 65, 65, 65, 65, 66, 66, 66,
66, 67, 67, 67, 68, 68, 68, 68, 68, 68, 69, 69, 69, 69, 69,
70, 70, 70, 70, 70, 71, 71, 71, 71, 71, 71, 71, 72, 72, 72,
72, 72, 73, 73, 73, 73, 73, 73, 73, 74, 74, 74, 74, 74, 75,
75, 75, 75, 76, 76, 76, 77, 77, 77, 78, 78, 78, 79, 79, 80,
80, 80, 80, 81, 81, 82, 83, 83, 84)
"y" <-
c(4.2426407, 6.0827625, 3.6055513, 3.6055513, 3.4641016, 5.4772256,
5.2915026, 5.4772256, 5.5677644, 5.0990195, 5.3851648, 5.9160798,
6, 6.4031242, 5.9160798, 5.4772256, 5.1961524, 4.7958315,
5.4772256, 5.4772256, 4.5825757, 4.6904158, 5.0990195, 5,
4.8989795, 3.8729833, 1.7320508, 1.7320508, 1.4142136, 6.4807407,
5.4772256, 5.3851648, 5.6568542, 5.7445626, 5.9160798, 4.472136,
4.6904158, 4.2426407, 4.5825757, 6.78233, 1.7320508, 5.4772256,
5.6568542, 2.6457513, 6, 4.7853944, 3.7416574, 4.6904158,
4.472136, 3.7416574, 5.0990195, 4.3588989, 4.472136, 4.8989795,
4.5825757, 4.8989795, 5, 6.4031242, 6.4807407, 6,
5.9160798, 6.0827625, 4.1593269, 4.7644517, 4.2895221, 5.00999,
4.7853944, 4.6797436, 4.8682646, 2.5495098, 2.2803509, 2.3664319,
4.4158804, 3.6878178, 3.5213634, 3.4928498, 2.3664319, 1.7029386,
5.5045436, 4.8270074, 5.4863467, 4.7222876, 4.9598387, 5.0892043,
5.2440442, 4.2071368, 4.4045431, 3.8470768, 3.4785054, 4.0620192,
4.2071368, 4.1713307, 4.1713307, 3.4785054, 4.0373258, 3.5071356,
3.591657, 1.9748418, 2.32379, 2.9325757, 3.2249031, 2.1213203,
1.2649111, 0.9486833, 2.3874673, 2.32379, 2.236068, 1.4832397,
1.6431677, 1.3784049, 2.6267851, 2.4698178, 1.6733201, 1.2247449,
1.6733201, 0.8944272, 1, 5.0695167, 5.2820451, 5.0398413,
5.3103672, 5.186521, 4.7958315, 5.3851648, 1.2247449, 0.7745967,
0.3162278, 3.4351128, 0.4472136, 3.3316662, 3.8078866, 2.6645825,
2.2135944, 3.2557641, 3, 1.4491377, 1.8708287, 1.5165751,
2.1908902, 6.3796552, 6.7527772, 6.4187226, 6.2369865, 5.3665631,
4.7328638, 6.6407831, 4.7116876, 5.9160798, 3.6055513, 7.5630682,
7.6157731, 4.8579831, 5.2345009, 5.5045436, 4.6904158, 3.8600518,
1.6124515, 1.3416408, 1.2247449, 1.3784049, 3.3166248, 6,
4.5825757, 2.6457513, 2.8284271, 4.8989795, 6.1806149, 5.138093,
5.6035703, 5.4680892, 4.2778499, 3.7148351, 6.1562976, 5.4313902,
6.7453688, 5.5587768, 3.8209946, 4.3588989, 3.1937439, 4.7328638,
4.6797436, 4.8887626, 4.8476799, 4.2308392, 4.5607017, 4.6797436,
4.5825757, 4.7539457, 4.4045431, 3.1622777, 3.4496377, 1.5165751,
2.2135944, 6.6858059, 6.7601775, 6.6407831, 6.5421709, 6.2128898,
6.6483081, 0.8944272, 0.9486833, 0.9486833, 0.6324555, 0.4472136,
3.5777088, 4.5934736, 3.5637059, 4.4271887, 5.3103672, 3.7682887,
4.2778499, 4.5166359, 5.4772256, 3.8729833, 5.8309519, 7.2801099,
4.7958315, 4.7958315, 5.2345009, 5.8309519, 7.3484692, 6.5574385,
7.4833148, 5.6568542, 5.5677644, 6.164414, 7.4833148, 4.7958315,
6, 6.78233, 6.9282032, 4.1231056, 3.7682887, 3.8987177,
5.2915026, 5.2915026, 2.8284271, 1.4142136, 1, 1.5491933,
0.83666, 7.2801099, 5.0990195, 5, 6.0166436, 5.8566202,
5.2820451, 5.8991525, 6.3245553, 5.1961524, 5.1961524, 4.3588989,
5.2249402, 5.5767374, 5.5677644, 5.2153619, 2.9664794, 4.669047,
7.2732386, 5.7008771, 5, 5.1088159, 5.6568542, 5.2249402,
4.7539457, 5.5946403, 5.1961524, 6.6558245, 4.9799598, 6.5878676,
6.97137, 6.041523, 6.5574385, 6.164414, 6.7082039, 5.9160798,
5.0990195, 4.8989795, 7.2111026, 7.8102497, 6.8556546, 7.2111026,
5.6568542, 4.8989795, 3.6742346, 1.7320508, 6.7082039, 3.3316662,
3.9115214, 3.4641016, 3.1622777, 3.8729833, 5.9160798, 5.2915026,
5.8309519, 6.164414, 5.0990195, 4.472136, 4.2426407, 4.1231056,
4.8989795, 5.2630789, 5.3572381, 5.4037024, 4.6797436, 4.9193496,
5.3009433, 5.1575188, 4.7644517, 5.3103672, 3, 3.9370039,
1.5491933, 0.7745967, 0.6324555, 3.1937439, 3.3316662, 3.5213634,
2.9154759, 3.8600518, 7.7459667, 7.4833148, 7.6157731, 2.8284271,
6.3245553, 5.9833101, 5.8906706, 5.8309519, 3.4641016, 3.2863353,
3.1304952, 2.0493902, 6.6332496, 6.7082039, 6.340347, 6.0580525,
5.9916609, 6.3718129, 5.3478968, 5.4772256, 4.472136, 5.00999,
5.4037024, 4.9396356, 4.3703547, 4.3817805, 4.0124805, 4.1593269,
4.6368092, 6.0083276, 5.6124861, 5.0695167, 5.2820451, 4.7958315,
7.0710678, 5.0990195, 4.9699095, 7.2111026, 4.5825757, 4.7958315,
4.2426407, 6.164414, 3.9370039, 5.2820451, 4.7328638, 5.5946403,
5.7445626, 5.8309519, 3.7416574)
Computing file changes ...
