https://github.com/jferna10/EnvPaper
Revision 95bd54a60d0b36c97fbe88b5fccee0330dc998f0 authored by jferna10 on 15 July 2021, 06:14:03 UTC, committed by GitHub on 15 July 2021, 06:14:03 UTC
1 parent 73ecefc
Tip revision: 95bd54a60d0b36c97fbe88b5fccee0330dc998f0 authored by jferna10 on 15 July 2021, 06:14:03 UTC
dependency update
dependency update
Tip revision: 95bd54a
LLP2_263_a_S25_L001_R1_001_8474_8560_codons.tab
AAA AAG AAC AAT AGA AGG AGC AGT ACA ACG ACC ACT ATA ATG ATC ATT GAA GAG GAC GAT GGA GGG GGC GGT GCA GCG GCC GCT GTA GTG GTC GTT CAA CAG CAC CAT CGA CGG CGC CGT CCA CCG CCC CCT CTA CTG CTC CTT TAA TAG TAC TAT TGA TGG TGC TGT TCA TCG TCC TCT TTA TTG TTC TTT SUM
0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 72 0 0 0 4 0 0 0 153202 22 15 16 34 0 0 0 0 0 0 0 0 0 0 0 6 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 79 0 0 0 0 0 0 0 153481
1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 0 1 20 0 0 0 2 0 0 0 17 8 6 34 153318 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 153481
2 0 0 6 0 0 0 8 0 0 0 16 0 32 8 153348 39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 153481
3 0 0 0 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0 0 0 0 0 0 0 0 1 19 0 0 54 152959 12 174 0 4 0 1 0 208 0 4 153481
4 0 0 89 1 0 0 0 0 0 0 0 0 0 0 0 0 47 3 152865 351 0 0 44 0 0 0 3 0 0 0 8 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 62 0 0 0 0 0 0 0 1 0 0 0 0 0 153481
5 1 0 0 141 0 0 0 0 0 0 0 0 0 0 0 1 10 7 57 153205 0 0 0 14 1 0 0 15 0 0 0 12 0 0 0 3 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 153481
6 0 1 0 0 0 1 0 0 0 0 0 0 0 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0 11 0 0 0 110 0 0 187 153046 6 13 0 1 0 0 0 0 0 0 0 0 0 0 0 38 0 0 153481
7 0 1 0 0 0 11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 389 0 0 37 152293 1 160 0 5 0 0 1 57 1 0 0 0 0 0 0 519 0 0 0 0 0 0 0 0 0 0 153481
8 1 0 133 0 52 20 152965 179 0 0 8 0 0 0 24 0 0 0 0 0 0 0 40 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 40 0 0 1 1 0 0 1 0 0 0 0 0 0 1 0 14 0 0 0 0 0 0 0 0 0 153481
9 0 0 0 0 0 0 0 0 0 1 0 0 2 84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 1 103 0 0 0 71 0 1 0 209 0 2 230 152464 8 240 0 0 0 0 0 3 1 0 0 0 0 0 0 49 1 0 153481
10 0 0 0 0 0 0 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 122 1 0 0 0 0 0 1 3 0 0 0 0 0 0 0 84 2 0 0 2 0 0 0 1 0 0 0 239 0 25 28 152490 375 0 0 9 0 0 0 72 0 153481
11 1 0 0 0 0 0 0 0 0 0 0 0 0 0 175 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 26 0 1 0 31 0 1 0 117 3 138 7 152868 60 0 0 2 0 0 0 2 0 0 0 1 0 0 0 38 2 153481
12 0 0 0 0 0 0 1 0 0 1 0 0 0 0 22 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 11 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 67 0 0 0 28 0 1 1 26 0 0 0 36 0 40 9 153160 75 153481
13 0 0 122 0 45 26 152602 77 2 0 7 0 0 74 62 1 0 0 0 0 0 21 98 253 0 0 0 0 0 0 0 0 0 0 1 0 0 0 36 0 0 1 2 0 1 0 2 0 0 0 2 0 0 2 30 0 1 0 8 0 0 4 1 0 153481
14 1 0 14 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 16 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 123 0 0 0 0 0 0 0 3 0 0 0 0 0 48 6 153063 25 0 0 29 0 0 0 43 0 2 2 102 1 153481
15 0 1 166 0 1 0 1 0 0 0 3 0 0 0 0 1 0 2 6 0 0 0 1 0 0 0 1 1 0 0 1 0 86 12 152806 48 0 0 43 0 0 1 242 0 0 0 11 2 1 0 42 1 0 0 0 0 0 0 0 0 0 0 1 0 153481
16 0 1 0 0 0 0 43 2 0 0 3 0 0 1 1 0 1 1 1 0 0 1 21 2 0 0 1 0 1 1 1 0 1 1 388 2 27 62 152340 248 1 8 142 2 1 4 55 4 0 0 1 0 0 0 102 4 0 0 1 0 0 2 3 0 153481
17 0 0 0 1 1 0 0 0 0 2 0 0 1 35 1 2 0 0 0 0 0 1 0 0 0 0 0 0 1 83 0 3 0 0 0 0 0 1 0 0 0 1 0 0 0 88 2 1 0 17 1 0 2 46 0 2 0 61 1 0 113 152900 6 107 153480
18 75 6 1 1 152709 105 36 24 2 0 1 0 102 1 1 0 5 0 2 0 324 10 1 1 0 0 0 0 3 0 0 0 0 0 1 0 17 0 0 1 0 0 0 0 1 0 2 0 0 0 0 0 45 0 0 1 0 0 0 0 0 0 0 0 153478
19 0 2 88 0 0 0 3 0 0 0 2 0 0 0 1 0 34 13 153010 71 2 0 143 0 0 0 30 0 1 1 28 0 1 0 11 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 27 4 0 0 0 1 0 0 1 0 0 2 0 0 153477
20 1266 417 2689 1086 322 113 796 921 213 127 1753 354 3565 274 2092 2487 2265 1352 1842 1990 2393 1701 5994 2109 1218 2327 4632 3568 8603 4179 1970 4032 2951 475 3760 1998 582 179 1585 1105 249 226 490 288 3731 3892 6771 6010 87 48 6084 3194 89 833 4928 7472 1156 1525 1206 2587 7746 2418 5348 5813 153476
21 1 0 2 0 0 0 1 0 0 0 0 0 0 0 76 0 0 0 0 0 0 0 1 0 0 0 1 0 1 0 32 0 0 0 29 0 1 0 54 3 1 0 174 5 48 18 152822 100 0 1 1 0 0 0 1 0 0 0 3 0 0 1 92 5 153474
22 1 1 0 1 0 2 0 0 0 1 0 0 0 11 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 44 1 35 0 0 0 0 0 0 0 0 0 1 0 0 0 64 0 1 0 9 1 0 0 29 1 0 0 80 0 0 37 153047 5 100 153474
23 0 1 0 85 0 3 0 28 0 1 0 28 15 47 32 153037 0 0 0 3 0 0 0 0 1 0 0 0 2 0 0 96 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 2 5 0 70 153474
24 0 0 0 0 0 1 0 0 0 2 0 0 92 0 0 0 111 0 1 1 104 0 1 1 68 1 0 0 152788 59 10 45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 183 2 1 0 153473
25 1 125 0 0 1 14 0 1 229 152811 49 23 0 153 0 0 0 1 0 0 0 1 0 0 0 16 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 27 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 153472
26 0 275 0 0 73 152804 9 58 0 2 0 0 0 100 0 2 0 7 0 0 5 107 0 0 0 0 0 0 0 2 0 0 0 2 0 0 0 9 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 153464
27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Computing file changes ...