Revision 96bca5ea1e83fec09d5de848264fd20ab6be53a8 authored by Rita Sablina on 02 March 2018, 16:55:56 UTC, committed by Rita Sablina on 02 March 2018, 16:55:56 UTC
1 parent 5716272
.travis.yml
language: r
r:
# - bioc-devel
- bioc-release
# warnings_are_errors: true
sudo: false
cache: packages
services:
- docker
addons:
apt:
packages:
- libprotobuf-dev
- libapparmor-dev
- protobuf-compiler
- libcurl4-openssl-dev
r_packages:
- covr
- data.table
- ggplot2
- testthat
- knitr
- rmarkdown
os:
- linux
- osx
bioc_required: true
bioc_packages:
- BiocCheck
before_install:
- R -e 'install.packages("devtools")'
- R -e 'source("https://bioconductor.org/biocLite.R"); biocLite()'
script:
- R CMD build .
- FILE=$(ls -1t *.tar.gz | head -n 1)
- R CMD check "$FILE"
- bash inst/test_js.sh
after_script:
- FILE=$(ls -1t *.tar.gz | head -n 1)
- Rscript -e "library(BiocCheck); BiocCheck(\"${FILE}\")"
after_success:
- Rscript -e 'covr::codecov()'
- if [ "$TRAVIS_OS_NAME" == "linux" ] && [ "$TRAVIS_BRANCH" == "master" ]; then
docker login -u="$DOCKER_USERNAME" -p="$DOCKER_PASSWORD";
docker build -t dzenkova/phantasus inst/docker/latest/ ;
docker tag dzenkova/phantasus dzenkova/phantasu:travis-$TRAVIS_BUILD_NUMBER ;
docker push dzenkova/phantasus;
fi
- if [ "$TRAVIS_OS_NAME" == "linux" ] && [ "$TRAVIS_BRANCH" == "develop" ]; then
docker login -u="$DOCKER_USERNAME" -p="$DOCKER_PASSWORD";
docker build -t dzenkova/phantasus:develop inst/docker/develop/ ;
docker push dzenkova/phantasus:develop;
fi
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