9d0edb5 | Jörg Buchwald | 03 November 2021, 15:42:23 UTC | add docstrings for process variables | 04 November 2021, 17:25:11 UTC |
23f0cd0 | Dmitri Naumov | 04 November 2021, 16:56:05 UTC | Merge branch 'VtkIntegerArrayConversion' into 'master' Vtk mesh converter: safely convert all integer types. See merge request ogs/ogs!3857 | 04 November 2021, 16:56:05 UTC |
4121a83 | Dmitri Naumov | 02 November 2021, 16:52:59 UTC | [MeL/VTK] Explicitly handle long types. Inverting some of the nested if-conditions. Now each vtkXxxArray type is converted to some mesh property type (depending on the architecture) or an error is raised. | 04 November 2021, 16:52:18 UTC |
d60e556 | Dmitri Naumov | 01 November 2021, 09:55:48 UTC | [MeL/VTK] Move one of if-cnds in static assert. | 04 November 2021, 16:52:18 UTC |
80f72c2 | Dmitri Naumov | 31 October 2021, 17:06:19 UTC | [MeL/VTK] Safely convert all (u)int8-64 bits types Adding conversion of short = int16 types. Merging conversion of vtkLongArray with vtkLongLongArray, and of vtkUnsignedLongArray with vtkUnsignedLongLongArray. For some systems the conversion of vtkLongArray, where the size of long and long long types are different is not available. (But could be added to the int type array conversion.) Actually the use of vtkLongArray is discouraged by VTK: "The C++ standard does not define the exact size of the long type, so use of this type directly is discouraged. If an array of 32 bit integers is needed, prefer vtkTypeInt32Array to this class. If an array of 64 bit integers is needed, prefer vtkTypeInt64Array to this class." -- from vtkLongArray doxygen documentation. Add compile-time tests for conversion of integer types since in OGS we use the char, short, int, long types which are not guarantied to be of corresponding length of vtk types. | 04 November 2021, 16:52:18 UTC |
a06ce18 | Dmitri Naumov | 31 October 2021, 17:07:53 UTC | [MeL/VTK] Extend warning for unsupported types. | 04 November 2021, 15:08:43 UTC |
a265fa5 | Dmitri Naumov | 31 October 2021, 16:37:50 UTC | [MeL/VTK] Additional check for type sizes. | 04 November 2021, 15:08:43 UTC |
95df051 | Dmitri Naumov | 29 October 2021, 15:19:48 UTC | [PL/BC] Distinguish two different types of errors. Absence of a named property vector and it's type mismatch are easily identified. | 04 November 2021, 15:08:43 UTC |
0ad843c | Tom Fischer | 04 November 2021, 05:10:50 UTC | Merge branch 'fix_prism15' into 'master' Some corrections in 15 node prism element See merge request ogs/ogs!3855 | 04 November 2021, 05:10:50 UTC |
bc2fede | Wenqing Wang | 27 October 2021, 14:13:00 UTC | [MeshLib/VTK] Corrected the element nodes of 15 node prism | 03 November 2021, 16:54:02 UTC |
f10d858 | Wenqing Wang | 27 October 2021, 14:12:17 UTC | [MeshLib] Corrected the face nodes and edge nodes of 15 node prism | 03 November 2021, 16:54:02 UTC |
b747eee | Wenqing Wang | 19 October 2021, 14:30:19 UTC | [Mesh/VTK] Removed the wrong index conversion of Prism15 | 03 November 2021, 16:54:02 UTC |
20d6dd7 | Dmitry Yu. Naumov | 03 November 2021, 14:53:06 UTC | Merge branch 'clang_format' into 'master' Applied clang-format to MeshSubset.h See merge request ogs/ogs!3867 | 03 November 2021, 14:53:06 UTC |
1489412 | Wenqing Wang | 03 November 2021, 12:42:50 UTC | [MeshLib/MeshSubset] Applied clang-format | 03 November 2021, 12:42:50 UTC |
bf7c749 | Lars Bilke | 02 November 2021, 19:30:16 UTC | Merge branch 'AddBranchCoverageToReport' into 'master' Add branch coverage to reports. See merge request ogs/ogs!3864 | 02 November 2021, 19:30:16 UTC |
61b7b0f | Dmitry Yu. Naumov | 02 November 2021, 17:22:32 UTC | Merge branch 'GMSH2OGS_quadratic_quad' into 'master' Added the conversion of quadratic quadrilateral elements in GMSH2OGS See merge request ogs/ogs!3863 | 02 November 2021, 17:22:32 UTC |
ce0ba8b | Wenqing Wang | 02 November 2021, 08:24:58 UTC | [GMSH2OGS] Added a test for quadratic quadrilateral elements | 02 November 2021, 16:27:11 UTC |
e0b784c | Wenqing Wang | 02 November 2021, 08:05:12 UTC | [GMSH2OGS] Added the conversion of 8-node and 9-node quadrilaterals | 02 November 2021, 16:27:11 UTC |
c74acfe | wenqing | 02 November 2021, 16:01:37 UTC | Merge branch 'SmallImprovements_2021-10' into 'master' [NumLib / ProcessLib] Small cleanups in class TimeStep. See merge request ogs/ogs!3862 | 02 November 2021, 16:01:37 UTC |
213412a | Dmitri Naumov | 02 November 2021, 12:12:37 UTC | Add branch coverage to reports. | 02 November 2021, 15:06:59 UTC |
8912b59 | Dmitry Yu. Naumov | 02 November 2021, 13:36:18 UTC | Merge branch 'pyramid13' into 'master' [Element] Show node indices of PyramidRule13 in the documentation See merge request ogs/ogs!3861 | 02 November 2021, 13:36:18 UTC |
4b52aaf | Thomas Fischer | 02 November 2021, 07:45:13 UTC | [NL] Remove methods only used in tests. | 02 November 2021, 12:34:40 UTC |
be087d5 | Thomas Fischer | 01 November 2021, 14:54:14 UTC | [T/NumLib] Update test after rename. | 02 November 2021, 12:34:40 UTC |
fa30e31 | Thomas Fischer | 27 October 2021, 07:21:58 UTC | [NL/PL] TimeStep::steps -> TimeStep::timeStepNumber. Improves readability of the code. | 02 November 2021, 12:34:40 UTC |
9c4f0f4 | Thomas Fischer | 27 October 2021, 07:13:43 UTC | [NumLib] TimeStep: Rename for better understandability. | 02 November 2021, 12:34:39 UTC |
64db537 | Thomas Fischer | 27 October 2021, 07:12:03 UTC | [NumLib] Default copy constructor. | 02 November 2021, 12:34:39 UTC |
cf2d0d6 | Thomas Fischer | 27 October 2021, 07:11:17 UTC | [NumLib] final for class TimeStep. | 02 November 2021, 12:34:39 UTC |
558db7c | Tom Fischer | 02 November 2021, 11:34:41 UTC | Merge branch 'improve_GMSH2OGS_1' into 'master' Improvement in GmshReader See merge request ogs/ogs!3859 | 02 November 2021, 11:34:41 UTC |
657f9b0 | Wenqing Wang | 02 November 2021, 08:42:37 UTC | [Pyramid13] Corrected the node indices of an edge | 02 November 2021, 08:42:37 UTC |
1210cb0 | Wenqing Wang | 29 September 2021, 14:25:47 UTC | [GmshReader] Introduced a function to avoid the redundant in the reading elements. | 02 November 2021, 08:06:25 UTC |
ea549b1 | Wenqing Wang | 19 October 2021, 14:28:39 UTC | [Element] Show element indices of PyramidRule13 in the documentation | 02 November 2021, 07:27:59 UTC |
7ea6c2a | Dmitry Yu. Naumov | 01 November 2021, 21:29:39 UTC | Merge branch 'fixing_test' into 'master' [Test/HT] Replaced 2D_Adaptive_dt_ThermalConvection_constviscosityStaggeredScheme with a new one Closes #3213 See merge request ogs/ogs!3854 | 01 November 2021, 21:29:39 UTC |
de716c0 | Wenqing Wang | 21 October 2021, 11:10:21 UTC | [Test/HT] Added a parallel computing test | 01 November 2021, 20:41:25 UTC |
fe2a81e | Wenqing Wang | 21 October 2021, 11:07:42 UTC | [Test/HT] Added a new test using the staggered scheme | 01 November 2021, 20:41:25 UTC |
9372977 | Wenqing Wang | 21 October 2021, 08:55:24 UTC | [Test/HT] Removed 2D_Adaptive_dt_ThermalConvection_constviscosityStaggeredScheme and 2D_ThermalConvection_constviscosityStaggeredScheme | 01 November 2021, 20:41:25 UTC |
caa0774 | Dmitri Naumov | 01 November 2021, 19:25:29 UTC | Add version 13.0 to apple-clang compilers list. | 01 November 2021, 19:25:29 UTC |
8d84661 | Dmitry Yu. Naumov | 01 November 2021, 17:23:07 UTC | Merge branch 'test_for_Gmsh2OGS_linear_elements' into 'master' [GMSH2OGS] Added a test to test the conversion of linear elements See merge request ogs/ogs!3860 | 01 November 2021, 17:23:07 UTC |
a6ce3e1 | Lars Bilke | 01 November 2021, 16:31:13 UTC | Merge branch 'enable-frontend' into 'master' Revert "[ci] Disable frontend job during EVE maintenance." See merge request ogs/ogs!3858 | 01 November 2021, 16:31:13 UTC |
238939d | Wenqing Wang | 19 October 2021, 14:34:09 UTC | [Test/GMSH2OGS] Added a test to test the conversion of linear elements | 01 November 2021, 16:26:24 UTC |
9003b33 | Dmitry Yu. Naumov | 01 November 2021, 15:15:53 UTC | Merge branch 'UpdateXDMFLibraryForNewerHDF5' into 'master' Update XDMF library version. Needed for hdf-1.13.0-rc6. See merge request ogs/ogs!3856 | 01 November 2021, 15:15:53 UTC |
ab1ec10 | Dmitri Naumov | 28 October 2021, 20:36:22 UTC | Update XDMF library version. Needed for hdf-1.13.0-rc6. | 01 November 2021, 09:31:27 UTC |
01bf781 | Lars Bilke | 01 November 2021, 08:35:14 UTC | Revert "[ci] Disable frontend job during EVE maintenance." This reverts commit 3b166e0a4f50807b91769457bc730535e5b09483. | 01 November 2021, 08:35:14 UTC |
69a2996 | Dmitry Yu. Naumov | 31 October 2021, 14:59:59 UTC | Merge branch 'Perm_Jacobian' into 'master' [MPL] make use of dvalue for (Orthotropic)EmbeddedFracturePermeability See merge request ogs/ogs!3848 | 31 October 2021, 14:59:59 UTC |
f804b6c | Florian Zill | 27 October 2021, 11:53:58 UTC | [T/HM] shared use of identical project data | 31 October 2021, 10:36:42 UTC |
30d87aa | Florian Zill | 27 October 2021, 11:45:02 UTC | [T/HM] use Taylor-Hood-Elements in Benchmarks | 31 October 2021, 10:36:42 UTC |
982c35b | Florian Zill | 18 October 2021, 13:17:09 UTC | [T/ML] unittest for LiftVectorToKelvin | 31 October 2021, 10:10:30 UTC |
e248f93 | Florian Zill | 18 October 2021, 09:43:08 UTC | [HM] convert permeability.dvalue to EigenTensor | 31 October 2021, 10:10:30 UTC |
a52a654 | Florian Zill | 18 October 2021, 09:42:39 UTC | [ML] EigenMatrixXd to EigenTensor | 31 October 2021, 10:10:30 UTC |
8737da2 | Florian Zill | 14 October 2021, 12:07:01 UTC | [T/HM] added test which profits from Kpu_k | 31 October 2021, 10:00:33 UTC |
003fa51 | Dmitri Naumov | 08 October 2021, 13:56:29 UTC | [T/HM] make use of OEFP-dvalue + direct solver | 31 October 2021, 09:51:02 UTC |
91a5014 | Florian Zill | 14 October 2021, 09:02:58 UTC | [MPL] added factor for dvalue in EFP and OEFP | 31 October 2021, 09:51:02 UTC |
3f6cde6 | Thomas Nagel | 07 October 2021, 19:49:11 UTC | [MPL] corrected dvalue of EmbeddedFracturePermeability | 31 October 2021, 09:51:01 UTC |
86a6c03 | Florian Zill | 14 October 2021, 12:30:23 UTC | [MPL] corrected dvalue for OrthotropicEmbeddedFracturePermeability | 31 October 2021, 09:51:01 UTC |
7f7ac75 | Florian Zill | 14 October 2021, 12:30:30 UTC | [MPL] Extend PropertyDataType by MatrixXd. | 31 October 2021, 09:51:01 UTC |
6c45aa2 | Florian Zill | 07 October 2021, 09:16:24 UTC | [ML] LiftVectorToKelvin and ReduceKelvinToVector | 31 October 2021, 09:51:01 UTC |
94944f4 | Dmitri Naumov | 08 October 2021, 13:56:08 UTC | [HM] Safe (incremental) Jacobian modification. | 31 October 2021, 09:51:01 UTC |
f15cc31 | Florian Zill | 06 October 2021, 08:53:54 UTC | [HM] Enable permeability-strain derivative | 31 October 2021, 09:51:01 UTC |
fa5c049 | Dmitry Yu. Naumov | 28 October 2021, 08:50:35 UTC | Merge branch 'PhaseField' into 'master' Additional material model for Phase field See merge request ogs/ogs!3850 | 28 October 2021, 08:50:35 UTC |
b6863e4 | KeitaYoshioka | 26 October 2021, 10:06:53 UTC | PhaseField docu for energy split models. | 26 October 2021, 20:16:11 UTC |
a7e0a33 | KeitaYoshioka | 26 October 2021, 10:08:30 UTC | PhaseField Ctest updated for energy split. New test for isotropic added. | 26 October 2021, 20:16:11 UTC |
d4dc54b | KeitaYoshioka | 26 October 2021, 10:06:15 UTC | PhaseField; energy split model. Previously only the Volumetric-Deviatoric model was available. Now an Isotropic model is added. | 26 October 2021, 20:16:11 UTC |
a9786e2 | Lars Bilke | 21 October 2021, 14:12:22 UTC | Merge branch 'fix-snakemake' into 'master' Fix snakemake See merge request ogs/ogs!3852 | 21 October 2021, 14:12:22 UTC |
67595df | Lars Bilke | 21 October 2021, 13:25:19 UTC | [ctest] Disable 1D_HeatConduction_neumann_newton on Apple M1. | 21 October 2021, 13:25:19 UTC |
da134e8 | Lars Bilke | 20 October 2021, 07:50:47 UTC | [ctest] Add missing default label. | 21 October 2021, 10:44:31 UTC |
2f3728d | Lars Bilke | 20 October 2021, 07:23:32 UTC | [cmake] Fixed snakemake find logic. | 21 October 2021, 10:44:31 UTC |
3b166e0 | Lars Bilke | 21 October 2021, 06:35:34 UTC | [ci] Disable frontend job during EVE maintenance. | 21 October 2021, 06:35:34 UTC |
97d0249 | renchao.lu | 20 October 2021, 20:47:11 UTC | Merge branch 'SurfaceMoles' into 'master' [CL] Use moles to input surface complexation sites via MPL Closes #3166 See merge request ogs/ogs!3796 | 20 October 2021, 20:47:11 UTC |
b107cd8 | renchao_lu | 19 October 2021, 12:23:44 UTC | [CL] write into phreeqc input file. | 20 October 2021, 15:53:35 UTC |
563e7f3 | renchao_lu | 19 October 2021, 12:18:48 UTC | [CL] indicator for the electrostatic term. | 20 October 2021, 15:53:35 UTC |
92c03eb | renchao_lu | 19 October 2021, 12:17:42 UTC | [CL] print site unit. | 20 October 2021, 15:53:35 UTC |
45073ab | renchao_lu | 19 October 2021, 12:06:47 UTC | [CL] initialize and set MoleBasedSurfaceDensity. | 20 October 2021, 15:53:35 UTC |
fb70deb | renchao_lu | 19 October 2021, 12:00:40 UTC | [CL] Store surface in the ChemicalSystem. | 20 October 2021, 15:53:35 UTC |
0f4a846 | renchao_lu | 19 October 2021, 11:59:08 UTC | [CL] create MoleBasedSurfaceSite. | 20 October 2021, 15:53:35 UTC |
e2301f2 | renchao_lu | 19 October 2021, 11:53:19 UTC | [CL] add struct MoleBasedSurfaceSite. | 20 October 2021, 15:53:35 UTC |
088b2da | renchao_lu | 19 October 2021, 11:52:57 UTC | [CL] remove print func from struct DensityBasedSurfaceSite. | 20 October 2021, 15:53:35 UTC |
90e8026 | Jaime Garibay | 30 September 2021, 17:32:31 UTC | [T|Docu] add test case and documentation. | 20 October 2021, 15:53:35 UTC |
e0cc1ee | Dmitry Yu. Naumov | 19 October 2021, 11:23:41 UTC | Merge branch 'fix-linking-nlohmann-json' into 'master' Fix linking nlohmann_json See merge request ogs/ogs!3851 | 19 October 2021, 11:23:41 UTC |
8458616 | Christoph Lehmann | 18 October 2021, 13:16:57 UTC | Rename local nlohmann_json::nlohmann_json target. Naming it same as in an externally found library. | 19 October 2021, 10:11:02 UTC |
e296306 | Dmitry Yu. Naumov | 19 October 2021, 09:43:49 UTC | Merge branch 'TH2M_strain_perm' into 'master' [TH2M] Fixed a bug in using pressure, strain, stress dependent permeability models See merge request ogs/ogs!3821 | 19 October 2021, 09:43:49 UTC |
a29b6f8 | Wenqing Wang | 15 October 2021, 10:05:39 UTC | [Test/TH2M] Registered a test with the strain dependent permeability. | 19 October 2021, 08:42:30 UTC |
850ea6c | Michael Pitz | 12 October 2021, 10:58:46 UTC | Added new bechmark for TH2M | 19 October 2021, 08:42:30 UTC |
7486f8d | Wenqing Wang | 04 October 2021, 09:44:20 UTC | [TH2M] Fixed a bug in using pressure, strain, stress dependent permeability models | 19 October 2021, 08:42:30 UTC |
55ddf3b | Wenqing Wang | 01 October 2021, 15:08:00 UTC | [TH2M] Moved the computation of intrinsic permeability to the place after setting stress and strain | 19 October 2021, 08:42:30 UTC |
6baa815 | Dmitry Yu. Naumov | 19 October 2021, 08:36:48 UTC | Merge branch 'InspectGmshInterfaceBug' into 'master' Fix a segmentation fault in the tool geometryToGmshGeo. Closes #3208 See merge request ogs/ogs!3847 | 19 October 2021, 08:36:48 UTC |
d74ac28 | Thomas Fischer | 14 October 2021, 10:24:38 UTC | [A/DE] Catch exception in callGMSH instead of crash. | 19 October 2021, 08:07:15 UTC |
50f731c | Thomas Fischer | 13 October 2021, 12:43:50 UTC | [A/U/MGT] Add cli arg for output of internal (merged) geometry. Writing the merged geometry to a file allows for visual inspection using a GUI. This could help to understand the issue. | 19 October 2021, 08:07:15 UTC |
c887f35 | Thomas Fischer | 13 October 2021, 12:40:40 UTC | [A/U/MGT] Catch exeption thrown when point is outside of bounding polygon. | 19 October 2021, 08:07:15 UTC |
5115c2b | Thomas Fischer | 12 October 2021, 14:34:01 UTC | [A/IO/Gmsh] Collect err msg. and throw exception instead of silent crash. | 19 October 2021, 08:07:15 UTC |
b95f221 | Thomas Fischer | 14 October 2021, 06:21:57 UTC | [T] (Crashing) Test for tool geometryToGmshGeo. test line intersecting domain boundary | 19 October 2021, 08:07:15 UTC |
e79ead7 | Lars Bilke | 19 October 2021, 05:57:51 UTC | [web] Fixed links for Python formatter. | 19 October 2021, 05:57:51 UTC |
9c3a513 | Lars Bilke | 18 October 2021, 12:21:28 UTC | [ci] Save benchmark outputs on coverage job. | 18 October 2021, 12:21:28 UTC |
eda7408 | Dmitry Yu. Naumov | 18 October 2021, 10:04:26 UTC | Merge branch 'partmesh_TaylorHood' into 'master' [partmesh] Removed the option of `-q` or `--lh_elements` for the impementation of parallel computing with Taylor Hood elements See merge request ogs/ogs!3805 | 18 October 2021, 10:04:26 UTC |
7de4634 | Wenqing Wang | 15 October 2021, 08:30:24 UTC | [Test/partmesh] Updated the reference result files of partmesh_2Dmesh_3partitions_binary | 18 October 2021, 08:46:41 UTC |
0bbb51b | Wenqing Wang | 30 September 2021, 13:33:07 UTC | Test/partmesh] Added another test (quad9 mesh) | 18 October 2021, 08:46:41 UTC |
13dd05e | Wenqing Wang | 29 September 2021, 07:31:19 UTC | [Test/partmesh] Added a test (quad8 mesh) | 18 October 2021, 08:46:41 UTC |
bb79dd0 | Wenqing Wang | 14 October 2021, 15:54:08 UTC | [partmesh] Removed the option of '-q' or '--lh_elements' for the mixed linear and high order elements | 18 October 2021, 08:46:41 UTC |
4d8d00c | Wenqing Wang | 29 September 2021, 07:27:28 UTC | [partmesh] Changed the order of the elements of the node vector as regular base nodes -> regular high order nodes -> ghost base nodes -> ghost high order nodes. | 18 October 2021, 08:46:41 UTC |
324bbf0 | Tom Fischer | 18 October 2021, 08:07:12 UTC | Merge branch 'FixMemLeakInResetPropertiesInPolygonalRegion' into 'master' [GL/MGTL] Pointer to vector of Point's wasn't cleaned up properly. Closes #3212 See merge request ogs/ogs!3849 | 18 October 2021, 08:07:12 UTC |
2cb70a7 | Dmitri Naumov | 16 October 2021, 08:42:38 UTC | [GL] Simplify rotatePolygonPointsToXY ret. value. The use of unique_ptr is not necessary since the vector will be destroyed when going out of scope in the MarkNodesOutsideOfPolygon. | 16 October 2021, 08:42:38 UTC |
b76a5e5 | Thomas Fischer | 15 October 2021, 08:05:04 UTC | [GL/MGTL] Change interface of rotatePolygonPointsToXY. | 15 October 2021, 20:16:41 UTC |