https://github.com/connor-lab/ncov2019-artic-nf
Revision 9f3f9fac98f4307d56f63c587b64116d69b094b2 authored by Matt Bull on 19 March 2020, 19:16:17 UTC, committed by Matt Bull on 19 March 2020, 19:16:17 UTC
1 parent 50f561d
Tip revision: 9f3f9fac98f4307d56f63c587b64116d69b094b2 authored by Matt Bull on 19 March 2020, 19:16:17 UTC
Add an illumina bam/consensus workflow using iVar
Add an illumina bam/consensus workflow using iVar
Tip revision: 9f3f9fa
| File | Mode | Size |
|---|---|---|
| conf | ||
| modules | ||
| scripts | ||
| workflows | ||
| .gitignore | -rw-r--r-- | 39 bytes |
| Dockerfile | -rw-r--r-- | 544 bytes |
| README.md | -rw-r--r-- | 2.9 KB |
| Singularity.artic-ncov2019-illumina | -rw-r--r-- | 529 bytes |
| Singularity.artic-ncov2019-medaka | -rw-r--r-- | 651 bytes |
| Singularity.artic-ncov2019-nanopolish | -rw-r--r-- | 615 bytes |
| environment-illumina.yml | -rw-r--r-- | 189 bytes |
| environment-medaka.yml | -rw-r--r-- | 786 bytes |
| environment.yml | -rw-r--r-- | 765 bytes |
| main.nf | -rw-r--r-- | 1.1 KB |
| nextflow.config | -rw-r--r-- | 2.1 KB |
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