Skip to main content
  • Home
  • Development
  • Documentation
  • Donate
  • Operational login
  • Browse the archive

swh logo
SoftwareHeritage
Software
Heritage
Archive
Features
  • Search

  • Downloads

  • Save code now

  • Add forge now

  • Help

Revision 9f7b6d4e450c337560b4a6df9198aa74c9be01b9 authored by Vladislav Kamenev on 07 August 2018, 09:41:33 UTC, committed by GitHub on 07 August 2018, 09:41:33 UTC
Merge pull request #85 from ctlab/develop
Develop
2 parent s d144ef5 + 39a8be5
  • Files
  • Changes
  • 1494e59
  • /
  • man
  • /
  • createES.Rd
Raw File Download
Permalinks

To reference or cite the objects present in the Software Heritage archive, permalinks based on SoftWare Hash IDentifiers (SWHIDs) must be used.
Select below a type of object currently browsed in order to display its associated SWHID and permalink.

  • revision
  • directory
  • content
revision badge
swh:1:rev:9f7b6d4e450c337560b4a6df9198aa74c9be01b9
directory badge Iframe embedding
swh:1:dir:425d082a601447368002d347cbce86dc2190bf87
content badge Iframe embedding
swh:1:cnt:0a9d970585a79a5b61e7672d5dfd3c7b4cb1a400
Citations

This interface enables to generate software citations, provided that the root directory of browsed objects contains a citation.cff or codemeta.json file.
Select below a type of object currently browsed in order to generate citations for them.

  • revision
  • directory
  • content
Generate software citation in BibTex format (requires biblatex-software package)
Generating citation ...
Generate software citation in BibTex format (requires biblatex-software package)
Generating citation ...
Generate software citation in BibTex format (requires biblatex-software package)
Generating citation ...
createES.Rd
% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/createES.R
\name{createES}
\alias{createES}
\title{Create ExpressionSet.}
\usage{
createES(data, pData, varLabels, fData, fvarLabels)
}
\arguments{
\item{data}{Gene expression matrix.}

\item{pData}{Matrix with phenotypical data.}

\item{varLabels}{Names of phenoData columns.}

\item{fData}{Matrix with feature data.}

\item{fvarLabels}{Names of featureData columns.}
}
\value{
produced ExpressionSet object
}
\description{
\code{createES} function produces an ExpressionSet object from given data,
    and exports it to global scope.
}
\examples{
\dontrun{
data <- matrix(1:15, 5, 3)
pData <- c("A", "B", "C")
varLabels <- "cat"
fData <- c("p", "r", "s", "t", "u")
fvarLabels <- "id"
createES(data, pData, varLabels, fData, fvarLabels)
}

}
The diff you're trying to view is too large. Only the first 1000 changed files have been loaded.
Showing with 0 additions and 0 deletions (0 / 0 diffs computed)
swh spinner

Computing file changes ...

Software Heritage — Copyright (C) 2015–2025, The Software Heritage developers. License: GNU AGPLv3+.
The source code of Software Heritage itself is available on our development forge.
The source code files archived by Software Heritage are available under their own copyright and licenses.
Terms of use: Archive access, API— Contact— JavaScript license information— Web API

back to top