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Revision a3d351fb6de40a4726ce169414d81715662c2728 authored by Konrad Werys on 16 November 2018, 12:33:56 UTC, committed by Konrad Werys on 16 November 2018, 12:33:56 UTC
adding calc time to the TomatoOptions
1 parent 02d6226
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.travis.yml
#------------------------------------#
#   Tomato   #
#------------------------------------#

language: cpp

os:
  - linux
  - osx

compiler:
  - gcc
  # - clang

branches:
  # Blacklist the documentation branch
  except:
    - gh-pages

# Environment variables
env:
# VXL c++11 needs cmake 3.9.5, which is not installed on travis. TODO: fix it
  matrix:
    - CXX_STANDARD=98
#    - CXX_STANDARD=11
  global:
    - GH_REPO_NAME: Tomato # used in documentation script
    - DOXYFILE: $TRAVIS_BUILD_DIR/Doxyfile # used in documentation script
    - INPUT_FOR_DOXY: "'. ./app ./lib ./tests'" # used in documentation script
    - OUTPUT_FOR_DOXY: "${TRAVIS_BUILD_DIR}/code_docs/${GH_REPO_NAME}" # used in documentation script
    - GH_REPO_REF: github.com/MRKonrad/Tomato.git # used in documentation script
    - USE_ITK: "OFF"
    - EXTENDED_BUILD: "OFF"
    - DEPLOY_BUILD: "OFF"
    - secure: 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

addons:
  apt:
    sources:
      - ubuntu-toolchain-r-test
    packages:
      - doxygen
      - doxygen-doc
      - doxygen-latex
      - doxygen-gui
      - graphviz
      - lcov

before_install:
  # condition for the extended build (with coverage and documentation)
  - if [ "$TRAVIS_OS_NAME" == "linux" ] && [ "$CXX" == "g++" ] && [ "$CXX_STANDARD" == "98" ]; then
      EXTENDED_BUILD="ON";
    fi
  # condition for the deployment build
  - if [ "$CXX" == "g++" ] && [ "$CXX_STANDARD" == "98" ]; then
      export DEPLOY_BUILD="ON";
    fi

install:
  # install coverage tools only in linux g++
  - if [ "$EXTENDED_BUILD" == "ON" ]; then
      sudo pip install codecov;
    fi

  - cd ${TRAVIS_BUILD_DIR}
  # download ITK
  - cd ..;
  - if [ "$TRAVIS_OS_NAME" == "osx" ]; then
      curl -L -O https://www.dropbox.com/s/zi7wfc9qev2529d/ITK413_osx_install.zip;
      unzip -a -q ITK413_osx_install.zip;
      export USE_ITK="ON";
    fi
  - if [ "$TRAVIS_OS_NAME" == "linux" ]; then
      curl -L -O https://www.dropbox.com/s/w35r9k376gg1cc3/ITK413_linux_install.zip;
      unzip -a -q ITK413_linux_install.zip;
      export USE_ITK="ON";
    fi
  - cd ${TRAVIS_BUILD_DIR};

script:
  # configure and generate
  - cmake . -DCMAKE_INSTALL_PREFIX=install -DUSE_NR2=OFF -DUSE_NR3=OFF -DUSE_PRIVATE_NR2=OFF -DCMAKE_CXX_STANDARD=${CXX_STANDARD} -DUSE_ITK=${USE_ITK}

  # add coverage option (only in linux g++)
  - if [ "$EXTENDED_BUILD" == "ON" ]; then
      cmake -DCOVERAGE=1 . ;
    fi

  # this is make
  - make -j8
  - make install

  # testing and getting the test coverage
  - cd install/tests
  - ./TomatoTests
  - cd $TRAVIS_BUILD_DIR

after_success:
  # Run coverage analysis only in linux g++. Eval because travis wants to parse -- as part of yaml block
  - if [ "$EXTENDED_BUILD" == "ON" ]; then
      cd $TRAVIS_BUILD_DIR ;
      eval "lcov --no-external --directory . --capture --output-file coverage.info" ;
      eval "lcov --remove coverage.info 'thirdParty/*' 'tests/*' -o coverage.info" ;
      eval "lcov --list coverage.info" ;
      bash <(curl -s https://codecov.io/bash) || echo "Codecov did not collect coverage reports" ;
    fi

  # Generate and deploy documentation only in linux g++
  - if [ "$EXTENDED_BUILD" == "ON" ]; then
      cd $TRAVIS_BUILD_DIR ;
      chmod +x generateDocumentationAndDeploy.sh;
      ./generateDocumentationAndDeploy.sh;
    fi

before_deploy:
  - echo "Ready to deploy?"
  - mkdir deployment
  # copy the data
  - cd install/tests/testData
  - zip -r testData.zip dicom
  - zip -r testData.zip Hcmr_Phantom_1916_Shmolli_192i_e11_fileList.yaml
  - cp testData.zip ${TRAVIS_BUILD_DIR}/deployment/testData.zip
  - cd $TRAVIS_BUILD_DIR
  # copy the executable
  - export exe_extended_name=TomatoExe_${TRAVIS_BRANCH}_${TRAVIS_OS_NAME} # just a variable
  - cp TomatoExe ${exe_extended_name}
  - cd deployment
  # Problem: when deploying an executable as it is, somewhere in the process its permission to execute (-x) is lost.
  # Solution: zip it and deploy the archive
  - zip -r ${exe_extended_name}.zip ../${exe_extended_name}
  - cd ..

deploy:
  provider: releases # GitHub
  api_key:
    secure: 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
  file_glob: ON # to use wildcards
  file: deployment/*
  skip_cleanup: ON
  on:
    tags: ON
    condition: ${DEPLOY_BUILD} == "ON" # I guess I have to pick one compiler
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