https://github.com/PublicHealthDynamicsLab/FRED
Revision a45e04ad99c865724a3c2b1a2d3fd979b3c6be88 authored by John Grefenstette on 07 January 2016, 16:32:02 UTC, committed by John Grefenstette on 07 January 2016, 16:32:02 UTC
1 parent 9bc2dce
Tip revision: a45e04ad99c865724a3c2b1a2d3fd979b3c6be88 authored by John Grefenstette on 07 January 2016, 16:32:02 UTC
working markov epidemic model
working markov epidemic model
Tip revision: a45e04a
Respiratory_Transmission.h
/*
This file is part of the FRED system.
Copyright (c) 2010-2015, University of Pittsburgh, John Grefenstette,
Shawn Brown, Roni Rosenfield, Alona Fyshe, David Galloway, Nathan
Stone, Jay DePasse, Anuroop Sriram, and Donald Burke.
Licensed under the BSD 3-Clause license. See the file "LICENSE" for
more information.
*/
//
//
// File: Respiratory_Transmission.h
//
#ifndef _FRED_RESPIRATORY_TRANSMISSION_H
#define _FRED_RESPIRATORY_TRANSMISSION_H
#include "Transmission.h"
class Disease;
class Mixing_Group;
class Person;
class Place;
class Respiratory_Transmission : public Transmission {
public:
Respiratory_Transmission();
~Respiratory_Transmission();
void setup(Disease* disease);
void spread_infection(int day, int disease_id, Mixing_Group* mixing_group);
void spread_infection(int day, int disease_id, Place* place);
private:
// place-specific transmission mode parameters
bool enable_neighborhood_density_transmission;
bool enable_density_transmission_maximum_infectees;
int density_transmission_maximum_infectees;
double** prob_contact;
void default_transmission_model(int day, int disease_id, Place* place);
void age_based_transmission_model(int day, int disease_id, Place* place);
void pairwise_transmission_model(int day, int disease_id, Place* place);
void density_transmission_model(int day, int disease_id, Place* place);
bool attempt_transmission(double transmission_prob, Person* infector, Person* infectee, int disease_id, int day, Place* place);
};
#endif // _FRED_RESPIRATORY_TRANSMISSION_H
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