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Revision a488b15c0418a8e604ce6339aae7b505ae3252c9 authored by Aria on 20 December 2020, 06:24:49 UTC, committed by GitHub on 20 December 2020, 06:24:49 UTC 
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combine_repeat.py 
# -*- coding: utf-8 -*-
"""
Created on Fri Nov 13 21:49:01 2020

@author: chena
"""
import pandas as pd

def combine(prefix):
    table1 = pd.read_csv("../result/scRNA_seq_2020_11_1-7/{}_1.csv".format(prefix))
    table2 = pd.read_csv("../result/scRNA_seq_2020_11_1-7/{}_2.csv".format(prefix))
    barcode = table1.columns[0]
    table = pd.concat([table1,table2],axis=0)
    del table1
    del table2
    result = table.groupby(barcode).sum()
    del table
    result.to_csv('../result/scRNA_seq_2020_11_1-7/{}_withInde.csv'.format(prefix))
    
prefixs = ['A1A2','B1A3','C1C2']
for p in prefixs:
    combine(p)
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