Revision a84a78222a7cf796c3951d9d8dd71dd59343447e authored by Fergus Cooper on 19 June 2023, 16:52:16 UTC, committed by Fergus Cooper on 19 June 2023, 16:52:16 UTC
1 parent 21e971b
CMakeLists.txt
# Copyright (c) 2005-2023, University of Oxford.
# All rights reserved.
#
# University of Oxford means the Chancellor, Masters and Scholars of the
# University of Oxford, having an administrative office at Wellington
# Square, Oxford OX1 2JD, UK.
#
# This file is part of Chaste.
#
# Redistribution and use in source and binary forms, with or without
# modification, are permitted provided that the following conditions are met:
# * Redistributions of source code must retain the above copyright notice,
# this list of conditions and the following disclaimer.
# * Redistributions in binary form must reproduce the above copyright notice,
# this list of conditions and the following disclaimer in the documentation
# and/or other materials provided with the distribution.
# * Neither the name of the University of Oxford nor the names of its
# contributors may be used to endorse or promote products derived from this
# software without specific prior written permission.
#
# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
# AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
# IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
# ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE
# LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
# CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE
# GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION)
# HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
# LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT
# OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
find_package(Chaste COMPONENTS ${Chaste_DEPENDS_heart})
set(Chaste_heart_SOURCES "")
file(GLOB xsd_config_files src/io/*.xsd)
foreach(xsd_config ${xsd_config_files})
xsd_schema(Chaste_heart_SOURCES ${xsd_config}
"--generate-serialization"
"--hxx-suffix" ".hpp"
"--cxx-suffix" ".cpp"
"--prologue-file" "${CMAKE_CURRENT_SOURCE_DIR}/src/io/XsdPrologue.txt"
"--epilogue-file" "${CMAKE_CURRENT_SOURCE_DIR}/src/io/XsdEpilogue.txt"
"--namespace-regex" "X.* $Xchaste::parametersX"
"--namespace-regex" "X.* https://chaste.comlab.ox.ac.uk/nss/parameters/(.+)Xchaste::parameters::v$1X"
)
endforeach()
file(MAKE_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/src/io)
set(Chaste_heart_INCLUDE_DIRS ${Chaste_heart_INCLUDE_DIRS} ${CMAKE_CURRENT_BINARY_DIR}/src/io)
# Make dynamic directory for dynamic cellml compilation
file(MAKE_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/dynamic)
chaste_do_component(heart ${Chaste_heart_SOURCES})
# make sure to link dl libraries
target_link_libraries(chaste_heart LINK_PUBLIC ${CMAKE_DL_LIBS})
# Compile dynamic models
set(dyn_sources dynamic/DynamicallyLoadableLr91.cpp dynamic/NotACellModel.cpp)
set(CMAKE_LIBRARY_OUTPUT_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/dynamic)
foreach(dyn_source ${dyn_sources})
get_filename_component(dyn_source_name ${dyn_source} NAME_WE)
add_library(${dyn_source_name} SHARED ${dyn_source})
set_property(TARGET ${dyn_source_name} PROPERTY CXX_STANDARD 14)
set_property(TARGET ${dyn_source_name} PROPERTY CXX_STANDARD_REQUIRED ON)
set_property(TARGET ${dyn_source_name} PROPERTY CMAKE_CXX_EXTENSIONS OFF)
if (${CMAKE_SYSTEM_NAME} MATCHES "Darwin")
target_link_libraries(${dyn_source_name} LINK_PRIVATE "-Wl,-undefined,dynamic_lookup")
#set_target_properties(${dyn_source_name} PROPERTIES LINK_FLAGS "-Wl,-undefined,dynamic_lookup")
else()
#target_link_libraries(${dyn_source_name} LINK_PRIVATE "-Wl,--undefined")
set_target_properties(${dyn_source_name} PROPERTIES LINK_FLAGS "-Wl,--undefined")
endif()
# add dynamic models to the heart_tests and Continuous targets
add_dependencies(heart ${dyn_source_name})
add_dependencies(Continuous ${dyn_source_name})
endforeach(dyn_source)
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