Revision

**aeb0ab472296c0298c2b007c30af2705a75a89f8**authored by ST John on**18 June 2019, 09:46:26 UTC**, committed by ST John on**18 June 2019, 09:48:10 UTC****1 parent**4ad6260

kullback_leiblers.py

```
# Copyright 2016 James Hensman, alexggmatthews
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
# -*- coding: utf-8 -*-
import tensorflow as tf
from . import settings
from .decors import name_scope
@name_scope()
def gauss_kl(q_mu, q_sqrt, K=None, *, K_cholesky=None):
"""
Compute the KL divergence KL[q || p] between
q(x) = N(q_mu, q_sqrt^2)
and
p(x) = N(0, K)
We assume N multiple independent distributions, given by the columns of
q_mu and the last dimension of q_sqrt. Returns the sum of the divergences.
q_mu is a matrix [M, L], each column contains a mean.
q_sqrt can be a 3D tensor [L, M, M], each matrix within is a lower
triangular square-root matrix of the covariance of q.
q_sqrt can be a matrix [M, L], each column represents the diagonal of a
square-root matrix of the covariance of q.
K is the covariance of p, [M, M] or [L, M, M]
K_cholesky is the cholesky of the covariance of p, [M, M] or [L, M, M]
Note: if no K matrix is given (both `K` and `K_cholesky` are None),
`gauss_kl` computes the KL divergence from p(x) = N(0, I) instead.
The K matrix can be passed either directly as `K`, or as its Cholesky factor, `K_cholesky`.
In either case, it can be a single matrix [M, M], in which case the sum of the L KL divergences
is computed by broadcasting, or L different covariances [L, M, M].
"""
if (K is not None) and (K_cholesky is not None):
raise ValueError("Ambiguous arguments: gauss_kl() must only "
"be passed one of `K` or `K_cholesky`.")
white = (K is None) and (K_cholesky is None)
diag = q_sqrt.get_shape().ndims == 2
M, B = tf.shape(q_mu)[0], tf.shape(q_mu)[1]
if white:
alpha = q_mu # [M, B]
else:
if K is not None:
Lp = tf.cholesky(K) # [B, M, M] or [M, M]
elif K_cholesky is not None:
Lp = K_cholesky # [B, M, M] or [M, M]
batched = Lp.get_shape().ndims == 3
q_mu = tf.transpose(q_mu)[:, :, None] if batched else q_mu # [B, M, 1] or [M, B]
alpha = tf.matrix_triangular_solve(Lp, q_mu, lower=True) # [B, M, 1] or [M, B]
if diag:
Lq = Lq_diag = q_sqrt
Lq_full = tf.matrix_diag(tf.transpose(q_sqrt)) # [B, M, M]
else:
Lq = Lq_full = tf.matrix_band_part(q_sqrt, -1, 0) # force lower triangle # [B, M, M]
Lq_diag = tf.matrix_diag_part(Lq) # [M, B]
# Mahalanobis term: μqᵀ Σp⁻¹ μq
mahalanobis = tf.reduce_sum(tf.square(alpha))
# Constant term: - B * M
constant = - tf.cast(tf.size(q_mu, out_type=tf.int64), dtype=settings.float_type)
# Log-determinant of the covariance of q(x):
logdet_qcov = tf.reduce_sum(tf.log(tf.square(Lq_diag)))
# Trace term: tr(Σp⁻¹ Σq)
if white:
trace = tf.reduce_sum(tf.square(Lq))
else:
if diag and not batched:
# K is [M, M] and q_sqrt is [M, B]: fast specialisation
LpT = tf.transpose(Lp) # [M, M]
Lp_inv = tf.matrix_triangular_solve(Lp, tf.eye(M, dtype=settings.float_type),lower=True) # [M, M]
K_inv = tf.matrix_diag_part(tf.matrix_triangular_solve(LpT, Lp_inv, lower=False))[:, None] # [M, M] -> [M, 1]
trace = tf.reduce_sum(K_inv * tf.square(q_sqrt))
else:
# TODO: broadcast instead of tile when tf allows (not implemented in tf <= 1.12)
Lp_full = Lp if batched else tf.tile(tf.expand_dims(Lp, 0), [B, 1, 1])
LpiLq = tf.matrix_triangular_solve(Lp_full, Lq_full, lower=True)
trace = tf.reduce_sum(tf.square(LpiLq))
twoKL = mahalanobis + constant - logdet_qcov + trace
# Log-determinant of the covariance of p(x):
if not white:
log_sqdiag_Lp = tf.log(tf.square(tf.matrix_diag_part(Lp)))
sum_log_sqdiag_Lp = tf.reduce_sum(log_sqdiag_Lp)
# If K is B x M x M, num_latent is no longer implicit, no need to multiply the single kernel logdet
scale = 1.0 if batched else tf.cast(B, settings.float_type)
twoKL += scale * sum_log_sqdiag_Lp
return 0.5 * twoKL
```

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