| af2212b | Kim Rutherford | 19 May 2011, 16:39:17 UTC | Fixed the setting of expires headers It was being set to a time in the past - not useful. | 19 May 2011, 16:39:17 UTC |
| c82c4e7 | Kim Rutherford | 19 May 2011, 15:23:48 UTC | Update template and test databases to match test ontologies | 19 May 2011, 15:23:48 UTC |
| ac24f48 | Kim Rutherford | 18 May 2011, 23:22:14 UTC | Combine calls to load script | 18 May 2011, 23:22:14 UTC |
| 067e8f7 | Kim Rutherford | 18 May 2011, 23:21:20 UTC | Better documentation and allow multiple load types | 18 May 2011, 23:21:20 UTC |
| 34ebd16 | Kim Rutherford | 18 May 2011, 23:20:48 UTC | Delete existing genes before loading | 18 May 2011, 23:20:48 UTC |
| db5f112 | Kim Rutherford | 18 May 2011, 19:00:49 UTC | Fixed paths in test app load script | 18 May 2011, 19:00:49 UTC |
| dbd0e27 | Kim Rutherford | 18 May 2011, 18:36:23 UTC | Add verbose flag | 18 May 2011, 18:36:23 UTC |
| cfc13cd | Kim Rutherford | 18 May 2011, 18:34:07 UTC | Update to version v203 | 18 May 2011, 18:34:07 UTC |
| dac31cd | Kim Rutherford | 18 May 2011, 18:34:03 UTC | Add script for re-loading the test database | 18 May 2011, 18:34:03 UTC |
| 5a05ecb | Kim Rutherford | 18 May 2011, 18:33:26 UTC | Allow re-loading of ontologies | 18 May 2011, 18:33:26 UTC |
| 60aff5b | Kim Rutherford | 18 May 2011, 18:30:00 UTC | Add verbose flag and allow loading multiple ontologies | 18 May 2011, 18:30:00 UTC |
| 94b22d1 | Kim Rutherford | 18 May 2011, 18:28:33 UTC | Be more explicit about PubMed for existing annotations | 18 May 2011, 18:28:33 UTC |
| 4de87a5 | Kim Rutherford | 18 May 2011, 18:22:58 UTC | Style fixes for header and menu | 18 May 2011, 18:23:18 UTC |
| c89810e | Kim Rutherford | 18 May 2011, 18:22:03 UTC | Move the relationship ontology file | 18 May 2011, 18:22:03 UTC |
| 0abbd2a | Kim Rutherford | 18 May 2011, 17:03:54 UTC | Simplify the synonym_types configuration | 18 May 2011, 17:09:11 UTC |
| 5c99e51 | Kim Rutherford | 18 May 2011, 16:31:45 UTC | Fix lucene problem: "transport" wasn't found Searching for "transport" in biological_process didn't return the transport term at the top of the results. The code has been changed to put the synonyms text in a separate lucene field. | 18 May 2011, 17:09:11 UTC |
| dcf6689 | Kim Rutherford | 18 May 2011, 00:08:55 UTC | Update to version v202 | 18 May 2011, 00:08:55 UTC |
| bbacc3d | Kim Rutherford | 18 May 2011, 00:08:35 UTC | Documentation fix | 18 May 2011, 00:08:35 UTC |
| 18d26ba | Kim Rutherford | 18 May 2011, 00:07:55 UTC | Merge branch 'branch/go-annotation-from-quickgo-ws' | 18 May 2011, 00:07:55 UTC |
| 66005d7 | Kim Rutherford | 18 May 2011, 00:06:56 UTC | Return term name of existing annotations | 18 May 2011, 00:06:56 UTC |
| db61e92 | Kim Rutherford | 17 May 2011, 23:53:48 UTC | Constrain results from QuickGO by ontology name | 17 May 2011, 23:53:48 UTC |
| 1c993f0 | Kim Rutherford | 17 May 2011, 18:12:56 UTC | Fix header link colour and experiment with background colour | 17 May 2011, 18:12:56 UTC |
| f064d94 | Kim Rutherford | 17 May 2011, 18:09:51 UTC | Initial implementation of annotation lookup with QuickGO | 17 May 2011, 18:09:51 UTC |
| 90fb925 | Kim Rutherford | 17 May 2011, 17:06:26 UTC | Added documentation for Chado::OntologyAnnotationLookup | 17 May 2011, 17:06:26 UTC |
| cc7c8ff | Kim Rutherford | 17 May 2011, 14:54:01 UTC | Update to version v201 | 17 May 2011, 14:54:01 UTC |
| 89516e1 | Kim Rutherford | 17 May 2011, 14:03:50 UTC | Cope better with missing gene names | 17 May 2011, 14:53:24 UTC |
| 4cc3286 | Kim Rutherford | 17 May 2011, 07:03:21 UTC | Remove debug code | 17 May 2011, 14:53:23 UTC |
| 1253940 | Kim Rutherford | 17 May 2011, 07:03:05 UTC | Use a generic image for the curation tool | 17 May 2011, 14:53:23 UTC |
| 938c80b | Kim Rutherford | 16 May 2011, 18:42:11 UTC | Add a UTF-8 encoded name to the test database | 16 May 2011, 18:42:11 UTC |
| 8662b86 | Kim Rutherford | 16 May 2011, 17:44:39 UTC | Update to version v200 | 16 May 2011, 17:44:39 UTC |
| b3a3d89 | Kim Rutherford | 16 May 2011, 17:44:33 UTC | Fix "Start curating" button to work in more situations | 16 May 2011, 17:44:33 UTC |
| 23e7848 | Kim Rutherford | 16 May 2011, 14:50:39 UTC | Open linkouts in a new window | 16 May 2011, 14:50:39 UTC |
| 908e7ce | Kim Rutherford | 16 May 2011, 14:23:28 UTC | Update to version v199 | 16 May 2011, 14:23:28 UTC |
| c5e7516 | Kim Rutherford | 16 May 2011, 14:23:25 UTC | Add configuration for linking from gene to AmiGO | 16 May 2011, 14:23:25 UTC |
| 402a181 | Kim Rutherford | 16 May 2011, 14:03:17 UTC | Move PomBase logo to the logos directory | 16 May 2011, 14:03:17 UTC |
| 3c8b3e1 | Kim Rutherford | 16 May 2011, 13:31:05 UTC | Update to version v198 | 16 May 2011, 13:31:05 UTC |
| a4747e1 | Kim Rutherford | 16 May 2011, 13:31:02 UTC | Fix start pubmed start curating button | 16 May 2011, 13:31:02 UTC |
| c071959 | Kim Rutherford | 16 May 2011, 13:27:41 UTC | Update to version v197 | 16 May 2011, 13:27:41 UTC |
| fc49f18 | Kim Rutherford | 16 May 2011, 13:25:48 UTC | Make the Catalyst path for the front page configurable | 16 May 2011, 13:27:30 UTC |
| a1bc785 | Kim Rutherford | 16 May 2011, 13:18:13 UTC | Update to version v196 | 16 May 2011, 13:18:13 UTC |
| dcc425f | Kim Rutherford | 16 May 2011, 13:18:11 UTC | Remove pombe specific text | 16 May 2011, 13:18:11 UTC |
| 9426af5 | Kim Rutherford | 16 May 2011, 13:17:54 UTC | Fix missing logo png | 16 May 2011, 13:17:54 UTC |
| 7ff6e13 | Kim Rutherford | 16 May 2011, 13:12:08 UTC | Update to version v195 | 16 May 2011, 13:12:08 UTC |
| 219cb96 | Kim Rutherford | 16 May 2011, 13:10:35 UTC | Merge branch 'branch/uniprot-look-and-feel' | 16 May 2011, 13:10:35 UTC |
| df5fb23 | Kim Rutherford | 16 May 2011, 13:09:01 UTC | Header image is now configurable | 16 May 2011, 13:09:01 UTC |
| e85fb81 | Kim Rutherford | 15 May 2011, 18:03:44 UTC | Remove unneeded configuration | 15 May 2011, 18:03:44 UTC |
| 5271c0e | Kim Rutherford | 14 May 2011, 12:26:31 UTC | Update to version v194 | 14 May 2011, 12:26:31 UTC |
| b5c43e5 | Kim Rutherford | 14 May 2011, 11:55:22 UTC | Merge branch 'branch/uniprot-genes' | 14 May 2011, 11:55:22 UTC |
| 362ebd8 | Kim Rutherford | 14 May 2011, 11:54:48 UTC | Add the organism to the gene page | 14 May 2011, 11:54:48 UTC |
| cf5a3b7 | Kim Rutherford | 14 May 2011, 11:53:08 UTC | Fix the case when no identifiers match | 14 May 2011, 11:53:24 UTC |
| 3a59f81 | Kim Rutherford | 14 May 2011, 09:28:20 UTC | Fixes for UniProt gene lookup | 14 May 2011, 09:28:20 UTC |
| 436aca8 | Kim Rutherford | 14 May 2011, 01:43:16 UTC | Add UniProtUtil and UniProt GeneLookup | 14 May 2011, 01:43:16 UTC |
| 142f436 | Kim Rutherford | 13 May 2011, 17:57:02 UTC | Merge branch 'branch/multiple-organisms' | 13 May 2011, 17:57:02 UTC |
| c47fede | Kim Rutherford | 13 May 2011, 17:53:05 UTC | Add cerevisiae genes and show organism on gene edit page | 13 May 2011, 17:53:05 UTC |
| 3a74bf5 | Kim Rutherford | 13 May 2011, 16:55:42 UTC | Better error handling | 13 May 2011, 17:15:38 UTC |
| 4c679df | Kim Rutherford | 13 May 2011, 17:13:40 UTC | Fix download incomplete warning | 13 May 2011, 17:13:40 UTC |
| e0e96e0 | Kim Rutherford | 13 May 2011, 17:12:06 UTC | Fix test | 13 May 2011, 17:12:06 UTC |
| e44bf61 | Kim Rutherford | 13 May 2011, 13:00:11 UTC | Improve error message | 13 May 2011, 13:00:11 UTC |
| 97bc366 | Kim Rutherford | 13 May 2011, 12:59:38 UTC | Formatting fixes | 13 May 2011, 12:59:38 UTC |
| 57fc04a | Kim Rutherford | 13 May 2011, 12:59:06 UTC | If nothing is returned from PubMed, return 0 from xml loader | 13 May 2011, 12:59:06 UTC |
| 2dbbba7 | Kim Rutherford | 13 May 2011, 06:20:49 UTC | Update to version v193 | 13 May 2011, 06:20:49 UTC |
| 9e5e569 | Kim Rutherford | 13 May 2011, 06:18:49 UTC | Fix style and formatting of PubMed ID lookup page | 13 May 2011, 06:18:49 UTC |
| c57d74c | Kim Rutherford | 13 May 2011, 00:41:41 UTC | Update to version v192 | 13 May 2011, 00:41:41 UTC |
| c266a04 | Kim Rutherford | 13 May 2011, 00:41:33 UTC | Tidy the "Edit gene list ..." link | 13 May 2011, 00:41:33 UTC |
| f89d4a6 | Kim Rutherford | 13 May 2011, 00:36:44 UTC | Reformat the gene list edit page | 13 May 2011, 00:36:44 UTC |
| 693ee22 | Kim Rutherford | 13 May 2011, 00:27:37 UTC | Reformat the gene upload page | 13 May 2011, 00:27:37 UTC |
| ddfedf8 | Kim Rutherford | 13 May 2011, 00:22:46 UTC | Reformat submitter update page | 13 May 2011, 00:22:46 UTC |
| 9959912 | Kim Rutherford | 13 May 2011, 00:16:57 UTC | Move messages below the breadcrumbs trail | 13 May 2011, 00:16:57 UTC |
| e1552d4 | Kim Rutherford | 13 May 2011, 00:09:05 UTC | Update to version v191 | 13 May 2011, 00:09:05 UTC |
| 01c7b08 | Kim Rutherford | 13 May 2011, 00:07:51 UTC | Rename submit button to the PubMed ID lookup page | 13 May 2011, 00:07:51 UTC |
| 13e2b14 | Kim Rutherford | 13 May 2011, 00:04:00 UTC | Fix "start curating" link on PubMed lookup page | 13 May 2011, 00:04:00 UTC |
| 6bcf08a | Kim Rutherford | 12 May 2011, 19:07:37 UTC | Clear the input box when resetting PubMed ID lookup form | 12 May 2011, 19:07:37 UTC |
| d2bfadf | Kim Rutherford | 12 May 2011, 18:54:07 UTC | Update to version v190 | 12 May 2011, 18:54:07 UTC |
| 691f635 | Kim Rutherford | 12 May 2011, 18:54:03 UTC | Return json from PubMed lookup and improve error reporting | 12 May 2011, 18:54:03 UTC |
| dffb48a | Kim Rutherford | 12 May 2011, 17:41:23 UTC | Update to version v189 | 12 May 2011, 17:41:23 UTC |
| 43d84f1 | Kim Rutherford | 12 May 2011, 17:41:03 UTC | Merge branch 'branch/start-with-pubmed-id-and-lookup' | 12 May 2011, 17:41:03 UTC |
| 023da47 | Kim Rutherford | 12 May 2011, 16:55:47 UTC | Cope with spaces in PubMed ID in lookup | 12 May 2011, 16:55:47 UTC |
| 5748c08 | Kim Rutherford | 12 May 2011, 16:52:56 UTC | Added a "Start curating" button to the PubMed ID lookup page | 12 May 2011, 16:52:56 UTC |
| 88e3ae0 | Kim Rutherford | 12 May 2011, 16:11:09 UTC | Add reset button to PubMed ID lookup form | 12 May 2011, 16:11:09 UTC |
| e731132 | Kim Rutherford | 12 May 2011, 15:31:48 UTC | Use publication display code from curs in PMID lookup | 12 May 2011, 15:31:48 UTC |
| 52a25da | Kim Rutherford | 12 May 2011, 15:31:10 UTC | Better title for the PMID lookup page | 12 May 2011, 15:31:10 UTC |
| 01600c5 | Kim Rutherford | 12 May 2011, 15:30:37 UTC | Make the main header look like the curs header | 12 May 2011, 15:30:37 UTC |
| a5e086e | Kim Rutherford | 12 May 2011, 14:25:56 UTC | Add a load type column to publication | 12 May 2011, 14:25:56 UTC |
| 99c9292 | Kim Rutherford | 12 May 2011, 13:57:46 UTC | Use LWP::Protocol::PSGI in tests | 12 May 2011, 14:07:18 UTC |
| 3838f79 | Kim Rutherford | 12 May 2011, 13:58:33 UTC | Add TestUtil::test_data_dir_full_path() | 12 May 2011, 14:07:18 UTC |
| 0994f53 | Kim Rutherford | 11 May 2011, 18:20:43 UTC | Add an AJAX pubmed id lookup page | 11 May 2011, 18:20:43 UTC |
| 3cee8a0 | Kim Rutherford | 11 May 2011, 15:05:07 UTC | Rename curs.curator to assigned_curator | 11 May 2011, 15:49:37 UTC |
| 85041e9 | Kim Rutherford | 11 May 2011, 13:36:53 UTC | Merge branch 'branch/use-hash-merge-for-config-merging' | 11 May 2011, 13:36:53 UTC |
| a48e067 | Kim Rutherford | 11 May 2011, 13:36:50 UTC | Fix merging of config files with Hash::Merge | 11 May 2011, 13:36:50 UTC |
| 4752844 | Kim Rutherford | 11 May 2011, 13:32:45 UTC | Merge branch 'master' into branch/use-hash-merge-for-config-merging | 11 May 2011, 13:32:45 UTC |
| ba0ece5 | Kim Rutherford | 09 May 2011, 23:03:57 UTC | Update to version v188 | 09 May 2011, 23:03:57 UTC |
| 01cf14d | Kim Rutherford | 09 May 2011, 23:03:40 UTC | Fix missing parameter | 09 May 2011, 23:03:40 UTC |
| f09e0ee | Kim Rutherford | 09 May 2011, 22:04:44 UTC | Update to version v187 | 09 May 2011, 22:04:44 UTC |
| a5284c7 | Kim Rutherford | 09 May 2011, 22:04:20 UTC | Fix config for publication detail page | 09 May 2011, 22:04:20 UTC |
| afebe1e | Kim Rutherford | 09 May 2011, 21:54:17 UTC | Use Hash::Merge for merging config files | 09 May 2011, 21:54:17 UTC |
| 090d334 | Kim Rutherford | 09 May 2011, 16:25:49 UTC | Add a feedback form for after annotation is finished | 09 May 2011, 16:56:59 UTC |
| b6015d3 | Kim Rutherford | 09 May 2011, 16:02:30 UTC | Removed unused code | 09 May 2011, 16:56:59 UTC |
| 233e28f | Kim Rutherford | 09 May 2011, 15:37:02 UTC | Better examples in phenotype help text | 09 May 2011, 16:56:59 UTC |
| e8512b2 | Kim Rutherford | 09 May 2011, 14:56:26 UTC | Don't serve .html files with Static::Simple | 09 May 2011, 14:56:39 UTC |
| 3c14f2b | Kim Rutherford | 09 May 2011, 14:04:41 UTC | Add code accidentally removed by [8e97dcb779] | 09 May 2011, 14:04:41 UTC |
