b3eb4c0 | Matt | 09 February 2022, 19:33:21 UTC | updated readme - data availability | 09 February 2022, 19:33:21 UTC |
6ce9a74 | Matt | 07 February 2022, 21:01:28 UTC | new methods figure for readme file | 07 February 2022, 21:01:28 UTC |
baa7720 | Matt | 13 January 2022, 17:08:18 UTC | hyperlink in readme | 13 January 2022, 17:08:18 UTC |
86aae63 | Matt | 13 January 2022, 17:02:54 UTC | update code guide section in Readme file | 13 January 2022, 17:02:54 UTC |
2d25498 | Matt | 12 January 2022, 18:48:32 UTC | updated ReadMe | 12 January 2022, 18:48:32 UTC |
013a031 | Matt | 07 January 2022, 18:23:38 UTC | updated readme file | 07 January 2022, 18:23:38 UTC |
3af2ce8 | Matt | 06 January 2022, 11:17:44 UTC | Update README.md | 06 January 2022, 11:17:44 UTC |
a3dec33 | Matt | 06 January 2022, 11:17:08 UTC | Update README.md | 06 January 2022, 11:17:08 UTC |
d6b571a | Matt | 05 January 2022, 00:25:01 UTC | predicted prevaelnce function for reversible model fits to multiple data & fixed bugs with other predicted prev functions | 05 January 2022, 00:25:01 UTC |
e7f9477 | Matt | 04 January 2022, 19:41:43 UTC | processing (post-MCMC) functions for reversible model fitting to multiple datasets | 04 January 2022, 19:41:43 UTC |
e45e955 | Matt | 04 January 2022, 17:49:04 UTC | processing MCMC functions (simple model fitted to multiple dataset) and producing prevalence curve functions | 04 January 2022, 17:49:04 UTC |
54cfe1f | Matt | 03 January 2022, 07:36:20 UTC | functions to run reversible model fit to multiple datasets (need to check outputs) | 03 January 2022, 07:36:20 UTC |
0f2b4d7 | Matt | 03 January 2022, 06:34:19 UTC | functions to run MCMC for simple model fitted to multiple datasets (up to plotting chains/histogram - not processed | 03 January 2022, 06:34:19 UTC |
c48c7b7 | Matt | 03 January 2022, 05:05:10 UTC | check | 03 January 2022, 05:05:10 UTC |
ba5ca1e | Matt | 31 December 2021, 02:55:05 UTC | functions to run MCMC for reversible model (single dataset) inclunding prior, likelihood, posterior, proposal and MCMC | 31 December 2021, 02:55:05 UTC |
92be139 | Matt | 24 December 2021, 23:22:43 UTC | modify function to plot predicted prevalence and different y lim scales (zooming in) | 24 December 2021, 23:22:43 UTC |
ac8aff3 | Matt | 19 December 2021, 18:16:22 UTC | removed ref to pig (pos_pigs and n_pigs in dataset and likelihood | 19 December 2021, 18:16:22 UTC |
77ca1c6 | Matt | 19 December 2021, 18:03:18 UTC | for simple model; functions for parameter median/credible intervals/posterior plot, loglik plots, calculaing model fits (DIC), calculate predicted prevalence curves/uncertainty band + plot | 19 December 2021, 18:03:18 UTC |
2810062 | Matt | 18 December 2021, 16:14:54 UTC | age-prevalence plot function added | 18 December 2021, 16:14:54 UTC |
889f4a6 | Matt | 17 December 2021, 17:01:58 UTC | debug so functions able to call MCMC successfully & plot/process chains (up to sub-sampling) | 17 December 2021, 17:01:58 UTC |
333ed09 | Matt | 16 December 2021, 20:03:50 UTC | adding function to optimise diagnostic priors (alpha and beta shape pars for beta distributions), and test data | 16 December 2021, 20:03:50 UTC |
4c2d6f4 | Matt | 15 December 2021, 23:24:55 UTC | master script and sub-script function for MCMC (simple FoI to single dataset) up to processing | 15 December 2021, 23:24:55 UTC |
f1ea3a4 | Matt | 15 December 2021, 22:38:34 UTC | first commit | 15 December 2021, 22:38:34 UTC |