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Revision b71ffe9b4156ff139e8b008bd27f0fbaf565300e authored by Scott Smith on 21 November 2012, 16:05:50 UTC, committed by Scott Smith on 21 November 2012, 16:05:50 UTC 
Activate test for GenerateClonalityPlots.t
 
Also added an optional parameter to shortcut on generating read counts,
though testing is not complete on using this.  Run time is 17 minutes.
1 parent 77be9f7
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CummeRbund @ 12a7cff
FLASH @ 137ea78
File-Grep @ 6d3b844
MGLtools @ 36e1bc4
MetaVelvet @ 23f6988
Net-HTTPServer @ 7b61f88
Statistics-TTest @ af8b4e8
VEP_plugins @ e6cec6a
allpathslg @ 5b5031a
apollo @ 129837b
bedtools @ 3ecf46b
bowtie @ c8182f0
bsmap @ 18f9bc2
bwa @ 91a4a0c
chimerascan @ d9987f1
cufflinks @ ec5e837
dendrix @ 6896ba6
ensembl @ 0346a66
far @ bf94b82
freebayes @ a99fec6
hotnet @ 10c7001
libbio-samtools-perl @ 1c292db
mutalin @ 9f7a6b4
pindel @ baea520
polymutt @ 09f526b
r-bioc-biobase @ 458118f
r-bioc-lumi @ 16150c9
r-cran-bitops @ f312c61
r-cran-catools @ dc49cc5
r-cran-ggplot2 @ fbe9316
r-cran-gplots @ b7871ec
r-cran-h5r @ cff67f4
r-cran-pbh5 @ ec99191
r-cran-skat @ c170e68
samtools @ 895bc41
samtools-hybrid @ f8743ac
savant @ c6fbfea
statgen @ 073454f
tophat @ 5b54a2f
tophat-fusion @ 14f2a40
trinity @ 76d1664
velvet @ c9b7d59
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