https://github.com/ctlab/quant3p
Revision be9977925e9e842cc755f14ced72bbee5c5d6d77 authored by Alexey Sergushichev on 02 December 2019, 17:22:45 UTC, committed by Alexey Sergushichev on 02 December 2019, 17:22:45 UTC
1 parent 0aa4fbf
Tip revision: be9977925e9e842cc755f14ced72bbee5c5d6d77 authored by Alexey Sergushichev on 02 December 2019, 17:22:45 UTC
fixes for htseq & macs2 upgrades
fixes for htseq & macs2 upgrades
Tip revision: be99779
setup.py
from setuptools import setup
setup(name='quant3p',
version='0.1',
description='Tools to do 3\' RNA-seq quantification',
url='http://github.com/ctlab/quant3p',
author='Alexey Sergushichev',
author_email='alserg@rain.ifmo.ru',
license='Apache2',
packages=['quant3p'],
install_requires=[
'HTSeq',
'pysam',
'pybedtools >= 0.6.9',
'macs2 >= 2.1.0'
],
scripts=['bin/macs2-stranded', 'bin/quant3p'],
entry_points = {
'console_scripts': [
'fix-mm=quant3p.fixmm:main',
'gtf-extend=quant3p.gtfextend:main'],
},
zip_safe=False)
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