| aab1949 | jdaeth274 | 09 November 2020, 20:32:22 UTC | updating flank searching | 09 November 2020, 20:32:22 UTC |
| 271be88 | jdaeth274 | 09 November 2020, 20:11:01 UTC | tweaking act mapper | 09 November 2020, 20:11:01 UTC |
| 4f2cb94 | jdaeth274 | 09 November 2020, 20:09:52 UTC | tweaking act mapper | 09 November 2020, 20:09:52 UTC |
| ee044e2 | jdaeth274 | 09 November 2020, 20:02:28 UTC | tweaking act mapper | 09 November 2020, 20:02:28 UTC |
| 6510346 | jdaeth274 | 09 November 2020, 20:00:24 UTC | tweaking act mapper | 09 November 2020, 20:00:24 UTC |
| 74553f1 | jdaeth274 | 09 November 2020, 19:53:52 UTC | tweaking act mapper | 09 November 2020, 19:53:52 UTC |
| 8e75759 | jdaeth274 | 09 November 2020, 19:46:34 UTC | tweaking act mapper | 09 November 2020, 19:46:34 UTC |
| 2ea69b3 | jdaeth274 | 09 November 2020, 19:43:15 UTC | tweaking act mapper | 09 November 2020, 19:43:15 UTC |
| 44ecc5d | jdaeth274 | 09 November 2020, 19:37:12 UTC | tweaking act mapper | 09 November 2020, 19:37:12 UTC |
| 398ebd2 | jdaeth274 | 09 November 2020, 16:20:44 UTC | updating more informative missing hits | 09 November 2020, 16:20:44 UTC |
| 9b9cc9b | jdaeth274 | 09 November 2020, 11:19:20 UTC | updating origin plots | 09 November 2020, 11:19:20 UTC |
| 52c2530 | jdaeth274 | 09 November 2020, 10:43:52 UTC | updateing recombination length plots | 09 November 2020, 10:43:52 UTC |
| cb65b14 | jdaeth274 | 09 November 2020, 10:24:21 UTC | updateing recombination length plots | 09 November 2020, 10:24:21 UTC |
| 490d4dc | jdaeth274 | 09 November 2020, 10:13:30 UTC | updateing recombination length plots | 09 November 2020, 10:13:30 UTC |
| b88f5f9 | jdaeth274 | 09 November 2020, 10:11:05 UTC | updateing recombination length plots | 09 November 2020, 10:11:05 UTC |
| dd17b45 | jdaeth274 | 09 November 2020, 10:08:27 UTC | updateing recombination length plots | 09 November 2020, 10:08:27 UTC |
| b5bd285 | jdaeth274 | 09 November 2020, 09:41:30 UTC | updateing recombination length plots | 09 November 2020, 09:41:30 UTC |
| d70211a | jdaeth274 | 09 November 2020, 09:40:22 UTC | updateing recombination length plots | 09 November 2020, 09:40:22 UTC |
| 66c650d | jdaeth274 | 09 November 2020, 09:33:41 UTC | updateing recombination length plots | 09 November 2020, 09:33:41 UTC |
| 6269edf | jdaeth274 | 09 November 2020, 09:31:27 UTC | updateing recombination length plots | 09 November 2020, 09:31:27 UTC |
| f146581 | jdaeth274 | 09 November 2020, 09:30:03 UTC | updating the recombination length plots | 09 November 2020, 09:30:03 UTC |
| 476461e | jdaeth274 | 09 November 2020, 09:21:36 UTC | updating the recombination length plots | 09 November 2020, 09:21:36 UTC |
| b49dcc1 | jdaeth274 | 08 November 2020, 20:35:56 UTC | adding in the recombination length plots | 08 November 2020, 20:35:56 UTC |
| 909f834 | jdaeth274 | 08 November 2020, 12:14:09 UTC | updating blast_hit_to_info | 08 November 2020, 12:14:09 UTC |
| 7169f9c | jdaeth274 | 07 November 2020, 20:48:45 UTC | updating blast_hit_to_info | 07 November 2020, 20:48:45 UTC |
| 513c0ea | jdaeth274 | 07 November 2020, 20:47:23 UTC | updating blast_hit_to_info | 07 November 2020, 20:47:23 UTC |
| 43d670a | jdaeth274 | 07 November 2020, 20:11:48 UTC | updating blast_hit_to_info | 07 November 2020, 20:11:48 UTC |
| a0d7708 | jdaeth274 | 07 November 2020, 19:48:14 UTC | updating blast_hit_to_info | 07 November 2020, 19:48:14 UTC |
| 754449c | jdaeth274 | 07 November 2020, 19:45:27 UTC | updating blast_hit_to_info | 07 November 2020, 19:45:27 UTC |
| 8939d11 | jdaeth274 | 07 November 2020, 19:33:17 UTC | updating blast_hit_to_info | 07 November 2020, 19:33:17 UTC |
| d639888 | jdaeth274 | 07 November 2020, 19:32:37 UTC | updating blast_hit_to_info | 07 November 2020, 19:32:37 UTC |
| 2477322 | jdaeth274 | 07 November 2020, 19:31:27 UTC | updating blast_hit_to_info | 07 November 2020, 19:31:27 UTC |
| b28ac5a | jdaeth274 | 07 November 2020, 15:50:28 UTC | pbs tweaking on cluster | 07 November 2020, 15:50:28 UTC |
| 206addf | jdaeth274 | 07 November 2020, 15:45:06 UTC | tweaking blast hits | 07 November 2020, 15:45:06 UTC |
| eeafbff | jdaeth274 | 06 November 2020, 20:39:15 UTC | sorting out erroneous recombination hits | 06 November 2020, 20:39:15 UTC |
| 932e1cd | jdaeth274 | 06 November 2020, 19:03:34 UTC | tweaking blast hits | 06 November 2020, 19:03:34 UTC |
| d14ffe6 | jdaeth274 | 06 November 2020, 17:42:23 UTC | tweaking blast hits | 06 November 2020, 17:42:23 UTC |
| 5ca3bd2 | jdaeth274 | 06 November 2020, 17:40:54 UTC | tweaking blast hits | 06 November 2020, 17:40:54 UTC |
| 0d4e53a | jdaeth274 | 06 November 2020, 17:39:49 UTC | tweaking blast hits | 06 November 2020, 17:39:49 UTC |
| 78f3469 | jdaeth274 | 06 November 2020, 12:43:37 UTC | multiple_blast_files | 06 November 2020, 12:43:37 UTC |
| 855bea4 | jdaeth274 | 06 November 2020, 12:41:44 UTC | sorting out lib and hit allocator | 06 November 2020, 12:41:44 UTC |
| 4f2665e | jdaeth274 | 06 November 2020, 11:36:47 UTC | updating missing hit info | 06 November 2020, 11:36:47 UTC |
| d7137f7 | jdaeth274 | 06 November 2020, 10:55:38 UTC | sorting out more mge than insert | 06 November 2020, 10:55:38 UTC |
| 51805fe | jdaeth274 | 05 November 2020, 12:00:46 UTC | tweaking hit allocator | 05 November 2020, 12:00:46 UTC |
| e3de02c | jdaeth274 | 05 November 2020, 10:51:47 UTC | tweaking graph results | 05 November 2020, 10:51:47 UTC |
| 0bef4e4 | jdaeth274 | 05 November 2020, 10:48:38 UTC | tweaking graph results | 05 November 2020, 10:48:38 UTC |
| 0cccb06 | jdaeth274 | 04 November 2020, 19:25:44 UTC | adding in lib tweak | 04 November 2020, 19:25:44 UTC |
| 45fc25c | jdaeth274 | 04 November 2020, 19:22:55 UTC | adding in lib tweak | 04 November 2020, 19:22:55 UTC |
| 80d87a3 | jdaeth274 | 04 November 2020, 19:19:51 UTC | adding in lib tweak | 04 November 2020, 19:19:51 UTC |
| 1104d92 | jdaeth274 | 04 November 2020, 19:01:16 UTC | adding in lib tweak | 04 November 2020, 19:01:16 UTC |
| 881454f | jdaeth274 | 04 November 2020, 18:49:31 UTC | adding in lib tweak | 04 November 2020, 18:49:31 UTC |
| d1122a1 | jdaeth274 | 04 November 2020, 18:44:23 UTC | adding in lib tweak | 04 November 2020, 18:44:23 UTC |
| eb7c42a | jdaeth274 | 04 November 2020, 18:42:24 UTC | adding in lib tweak | 04 November 2020, 18:42:24 UTC |
| 1c05857 | jdaeth274 | 04 November 2020, 18:31:21 UTC | adding in lib tweak | 04 November 2020, 18:31:21 UTC |
| e7429dd | jdaeth274 | 04 November 2020, 18:29:50 UTC | adding in lib tweak | 04 November 2020, 18:29:50 UTC |
| c97e30c | jdaeth274 | 04 November 2020, 18:14:30 UTC | adding in lib tweak | 04 November 2020, 18:14:30 UTC |
| 829ac67 | jdaeth274 | 04 November 2020, 18:09:35 UTC | adding in lib tweak | 04 November 2020, 18:09:35 UTC |
| 2de1207 | jdaeth274 | 03 November 2020, 12:06:35 UTC | tweaking pbs on hpc | 03 November 2020, 12:06:35 UTC |
| 2ff8688 | jdaeth274 | 03 November 2020, 12:06:01 UTC | tweaking library search and hit allocators | 03 November 2020, 12:06:01 UTC |
| 6ba0c77 | jdaeth274 | 02 November 2020, 21:07:19 UTC | tweaking hit allocator | 02 November 2020, 21:07:19 UTC |
| 2fc694c | jdaeth274 | 02 November 2020, 20:38:04 UTC | tweaking hit allocator | 02 November 2020, 20:38:04 UTC |
| 24f901b | jdaeth274 | 02 November 2020, 20:36:06 UTC | tweaking hit allocator | 02 November 2020, 20:36:06 UTC |
| 4020f6b | jdaeth274 | 02 November 2020, 20:28:14 UTC | tweaking hit allocator | 02 November 2020, 20:28:14 UTC |
| 2ed2af9 | jdaeth274 | 02 November 2020, 20:26:25 UTC | tweaking hit allocator | 02 November 2020, 20:26:25 UTC |
| 1765ff1 | jdaeth274 | 02 November 2020, 20:21:50 UTC | tweaking hit allocator | 02 November 2020, 20:21:50 UTC |
| 67a5e4f | jdaeth274 | 02 November 2020, 20:19:42 UTC | tweaking hit allocator | 02 November 2020, 20:19:42 UTC |
| eb037ef | jdaeth274 | 02 November 2020, 20:15:09 UTC | tweaking hit allocator | 02 November 2020, 20:15:09 UTC |
| 2ee502d | jdaeth274 | 02 November 2020, 20:09:22 UTC | tweaking hit allocator | 02 November 2020, 20:09:22 UTC |
| fc15d23 | jdaeth274 | 02 November 2020, 20:08:30 UTC | tweaking hit allocator | 02 November 2020, 20:08:30 UTC |
| 691ac92 | jdaeth274 | 02 November 2020, 20:03:19 UTC | tweaking hit allocator | 02 November 2020, 20:03:19 UTC |
| e46c51d | jdaeth274 | 02 November 2020, 20:01:01 UTC | tweaking hit allocator | 02 November 2020, 20:01:01 UTC |
| c148c33 | jdaeth274 | 02 November 2020, 19:57:35 UTC | tweaking hit allocator | 02 November 2020, 19:57:35 UTC |
| 306bbfd | jdaeth274 | 02 November 2020, 19:55:27 UTC | tweaking hit allocator | 02 November 2020, 19:55:27 UTC |
| cf6442e | jdaeth274 | 02 November 2020, 19:52:53 UTC | tweaking hit allocator | 02 November 2020, 19:52:53 UTC |
| a0bd80f | jdaeth274 | 02 November 2020, 19:51:06 UTC | tweaking hit allocator | 02 November 2020, 19:51:06 UTC |
| 2bf5304 | jdaeth274 | 02 November 2020, 19:36:13 UTC | tweaking hit allocator | 02 November 2020, 19:36:13 UTC |
| 32d23c3 | jdaeth274 | 02 November 2020, 19:04:09 UTC | updating lib search | 02 November 2020, 19:04:09 UTC |
| 4398d1c | jdaeth274 | 02 November 2020, 12:31:24 UTC | altering lib and hit allocator for streamlined running on cluster | 02 November 2020, 12:31:24 UTC |
| 8ae08a9 | jdaeth274 | 01 November 2020, 15:45:54 UTC | tweaking before_and_after_hits | 01 November 2020, 15:45:54 UTC |
| 6c2de71 | jdaeth274 | 31 October 2020, 16:36:17 UTC | plotting out the blast results | 31 October 2020, 16:36:17 UTC |
| ccae496 | jdaeth274 | 31 October 2020, 12:36:34 UTC | tweaking merging hits to drop multicontig spanning hits | 31 October 2020, 12:36:34 UTC |
| 6f72a9b | jdaeth274 | 30 October 2020, 18:53:39 UTC | tweaking 916 pbs | 30 October 2020, 18:53:39 UTC |
| 20415ee | jdaeth274 | 30 October 2020, 17:45:06 UTC | adding in pbs mega flanks search | 30 October 2020, 17:45:06 UTC |
| f79896b | jdaeth274 | 30 October 2020, 17:43:55 UTC | tweaking flank search | 30 October 2020, 17:43:55 UTC |
| d402ddc | jdaeth274 | 30 October 2020, 16:54:09 UTC | adding in flank search only | 30 October 2020, 16:54:09 UTC |
| 1051aec | jdaeth274 | 29 October 2020, 16:31:21 UTC | tweaking hit allocator and library creator | 29 October 2020, 16:31:21 UTC |
| 55710b7 | jdaeth274 | 29 October 2020, 12:24:38 UTC | tweaking pbs | 29 October 2020, 12:24:38 UTC |
| dbda562 | jdaeth274 | 29 October 2020, 12:23:24 UTC | tweaking hit allocator | 29 October 2020, 12:23:24 UTC |
| e7e17aa | jdaeth274 | 29 October 2020, 12:17:28 UTC | switching to pastml for ancestral state recon | 29 October 2020, 12:17:28 UTC |
| 8fca93e | jdaeth274 | 28 October 2020, 15:10:49 UTC | tweaking blast command2 | 28 October 2020, 15:10:49 UTC |
| 518fad8 | jdaeth274 | 28 October 2020, 15:10:24 UTC | tweaking blast command | 28 October 2020, 15:10:24 UTC |
| dc1a1dd | jdaeth274 | 28 October 2020, 13:27:23 UTC | tweaking reccy detector more | 28 October 2020, 13:27:23 UTC |
| 5c53c99 | jdaeth274 | 28 October 2020, 12:37:34 UTC | tweaking blast hits | 28 October 2020, 12:37:34 UTC |
| 6933981 | jdaeth274 | 28 October 2020, 12:36:17 UTC | tweaking reccy detector | 28 October 2020, 12:36:17 UTC |
| cb024a7 | jdaeth274 | 27 October 2020, 19:45:53 UTC | tweaking blast hits | 27 October 2020, 19:45:53 UTC |
| 70a9541 | jdaeth274 | 27 October 2020, 13:30:48 UTC | tweaking library creator | 27 October 2020, 13:30:48 UTC |
| ae76a2c | jdaeth274 | 26 October 2020, 20:15:02 UTC | tweaking the act mapping back | 26 October 2020, 20:15:02 UTC |
| 66d4cba | jdaeth274 | 26 October 2020, 12:34:58 UTC | updating moving python isolates around | 26 October 2020, 12:34:58 UTC |
| 41d8e32 | jdaeth274 | 26 October 2020, 12:33:04 UTC | Merge branch 'master' of https://github.com/jdaeth274/ISA | 26 October 2020, 12:33:04 UTC |
| 1bb8c37 | jdaeth274 | 26 October 2020, 12:32:46 UTC | fixing bug in reccy and updating bash | 26 October 2020, 12:32:46 UTC |
