https://github.com/qqwang-berkeley/JUM
Revision ca186cb59836b470d435b72fd2e0d37f7d6b096e authored by Qingqing Wang on 12 April 2018, 21:50:40 UTC, committed by GitHub on 12 April 2018, 21:50:40 UTC
1 parent 0e9e875
History
Tip revision: ca186cb59836b470d435b72fd2e0d37f7d6b096e authored by Qingqing Wang on 12 April 2018, 21:50:40 UTC
Rename prepare_count_file_after_STAR_2_pass_mapping.pl to bin/prepare_count_file_after_STAR_2_pass_mapping.pl
Tip revision: ca186cb
File Mode Size
bin
JUM manual for 1.3.7-1.3.11 -rw-r--r-- 23.5 KB
JUM_2-1.sh -rw-r--r-- 469 bytes
JUM_2-2.sh -rw-r--r-- 1.6 KB
JUM_2-3.sh -rw-r--r-- 12.9 KB
JUM_3.sh -rw-r--r-- 13.9 KB
JUM_4.sh -rw-r--r-- 7.2 KB
README.md -rw-r--r-- 1.1 KB
prepare_significant_long_intron_retention_event.pl -rw-r--r-- 2.4 KB
preparing_intron_retention_count_table_long_intron.pl -rw-r--r-- 3.4 KB
preparing_intron_retention_count_table_short_intron.pl -rw-r--r-- 1.9 KB
preparing_intron_retention_event_for_JUM_combine.pl -rw-r--r-- 4.1 KB
process_raw_AS_differential_output.pl -rw-r--r-- 6.6 KB
profile_AS_events_sharing_3_prime_ss.pl -rw-r--r-- 2.0 KB
profile_AS_events_sharing_5_prime_ss.pl -rw-r--r-- 2.0 KB
profile_overhang_from_STAR_output_step_1.pl -rw-r--r-- 3.0 KB
profile_overhang_from_STAR_output_step_2.pl -rw-r--r-- 1.6 KB
profiling_splicing_patterns_from_AS_events.pl -rw-r--r-- 3.2 KB
profiling_splicing_patterns_from_AS_events_1.pl -rw-r--r-- 1.5 KB
profiling_splicing_patterns_from_AS_events_2.pl -rw-r--r-- 1.3 KB
profiling_splicing_patterns_from_AS_events_3_updated.pl -rw-r--r-- 8.7 KB
profiling_splicing_patterns_from_AS_events_4.pl -rw-r--r-- 1.6 KB
profiling_splicing_patterns_from_AS_events_5.pl -rw-r--r-- 2.4 KB
profiling_splicing_patterns_from_AS_events_6.pl -rw-r--r-- 2.4 KB
screening_A5SS_A3SS_events.pl -rw-r--r-- 1.8 KB
screening_MXE_events.pl -rw-r--r-- 5.0 KB
screening_cassette_exon_events.pl -rw-r--r-- 3.0 KB
screening_intron_retention_event_for_deltachange_consistency.pl -rw-r--r-- 2.1 KB
screening_intron_retention_event_for_no_inner_junction.pl -rw-r--r-- 1.8 KB
second_processing_generate_JUM_reference_for_profiled_total_alternative_splicing_event_junction.pl -rw-r--r-- 1.7 KB

README.md

back to top