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Revision Author Date Message Commit Date
cdf62de nthash.hpp: added precomputed seed for faster rolling 10 February 2019, 20:46:05 UTC
67f6e76 Modified README with mandatory prefix/output option 16 October 2018, 18:59:16 UTC
dd4aea4 Fixing bugs and typos and updatig help and version messages 16 October 2018, 18:45:40 UTC
c9e66cc README and version updated to 1.1.0 12 October 2018, 22:15:45 UTC
0272ffb Added option for output to a single file 04 October 2018, 21:50:31 UTC
a8105d9 nthash.hpp: Increased periodicity of ntHash 04 September 2018, 04:39:06 UTC
e3feb96 Print error for FASTA/FASTQ file without header 13 April 2018, 01:07:45 UTC
9cc1dcf brew install brewsci/bio/ntcard 01 March 2018, 23:34:44 UTC
801b16d Updated date 29 January 2018, 15:54:39 UTC
e587d4d Update README.md 31 December 2017, 16:50:56 UTC
7a4bcc2 Update README.md 29 December 2017, 22:26:05 UTC
a3598bd Update README.md 29 December 2017, 22:25:31 UTC
4c4412a configure.ac: updating ntcard version 28 November 2017, 22:16:40 UTC
fb05b32 Changing License to MIT 17 August 2017, 16:44:37 UTC
4a15865 Delete COPYRIGHT 17 August 2017, 16:38:47 UTC
73dba86 Changing license from GPLv3 to MIT License 17 August 2017, 16:37:52 UTC
1cf3557 Checking user set required -k parameter 09 August 2017, 17:56:41 UTC
e694ac8 nthash.hpp: improving rotate ops 25 July 2017, 09:24:24 UTC
c5a5fb2 updated citation 28 April 2017, 16:21:33 UTC
7132d77 ntcard.cpp: fixing the bug to pass more than 15 k values 20 April 2017, 23:57:33 UTC
f50f8d1 nthash.hpp: formatted 31 March 2017, 17:10:03 UTC
ea75b66 nthll, ntcard: remove extra line 29 March 2017, 18:52:30 UTC
ff76406 ntcard.cpp: set --cov to 65535 29 March 2017, 18:48:43 UTC
a3cc209 Update README: specify prefix for output file 26 February 2017, 19:16:02 UTC
a361732 Added feature: specify prefix for output histogram files 26 February 2017, 19:06:06 UTC
15ce07e Update configure.ac 02 February 2017, 22:39:42 UTC
c7e9f88 Make -O3 defualt in configure.ac 02 February 2017, 19:21:58 UTC
73c2f3a Added inline to all functions 31 January 2017, 22:43:28 UTC
3d1b07b Makefile.am: included StringUtil.h 19 January 2017, 01:05:25 UTC
dd1b886 Update README.md 11 January 2017, 22:17:17 UTC
de4252d Update README.md 11 January 2017, 21:01:42 UTC
86d28c1 Update README.md 11 January 2017, 20:56:14 UTC
88f0622 Autotools version 11 January 2017, 20:49:53 UTC
7eda6f8 Update README.md 08 January 2017, 19:16:36 UTC
9a328dc Update README.md 22 December 2016, 20:40:56 UTC
38d21c1 made code C++14 friendly 22 December 2016, 20:32:26 UTC
8be737f Added multiple k option 22 December 2016, 20:20:30 UTC
1789808 Update README.md 06 December 2016, 20:45:38 UTC
189c34c Update README.md 06 December 2016, 20:22:17 UTC
83319cd Added COPYRIGHT 04 November 2016, 23:29:45 UTC
2ff88f3 Update LICENSE 04 November 2016, 17:10:37 UTC
1057d5e Delete COPYRIGHT 03 November 2016, 21:21:14 UTC
feb151e Update README.md 03 November 2016, 20:52:23 UTC
d6a5b67 Update LICENSE 03 November 2016, 18:59:36 UTC
30b0cbc Update LICENSE 03 November 2016, 18:14:11 UTC
14cf1e8 Update LICENSE 03 November 2016, 18:12:53 UTC
f37ff6d Update LICENSE 03 November 2016, 17:42:54 UTC
0931eda Update README.md 31 October 2016, 23:19:47 UTC
cd43ba8 Update README.md 31 October 2016, 23:18:18 UTC
434dcb7 Update README.md 31 October 2016, 20:40:58 UTC
76cef0a Update README.md 31 October 2016, 20:31:41 UTC
53d67d7 Update README.md 31 October 2016, 20:27:08 UTC
5cfb4bc Adding GPL-3 License 31 October 2016, 20:13:01 UTC
65a2cd7 Submitted version 31 October 2016, 20:03:02 UTC
9c199bd nthash handles k-mers with nonACGT 20 July 2016, 17:55:50 UTC
97dc3b2 nthist: accepting bam, sam, gz, bz, fasta, fastq format 19 July 2016, 17:52:26 UTC
5409a93 nonACGT resolved 16 July 2016, 19:12:44 UTC
ce1b6ee nthist first version 09 July 2016, 17:58:29 UTC
34a6dd0 Makefile:added ntcardm 21 June 2016, 00:35:26 UTC
2257e55 ntcardm.cpp: multi k-value ntcard added 21 June 2016, 00:10:17 UTC
bcd0f86 estComp added 20 June 2016, 16:38:32 UTC
6569665 ntcard.cpp: formatted 20 June 2016, 16:08:55 UTC
6d9fc33 ntcard.cpp: f1 computation added 20 June 2016, 16:06:33 UTC
fa9c5c1 Merge branch 'master' of github.com:bcgsc/ntCard 17 June 2016, 21:29:46 UTC
9074963 First Parallel Version: Data Parallelism 16 June 2016, 21:45:45 UTC
72ba3bf Revert "Kmer count comparison of kmc-abyss" This reverts commit 53f1a9d5713d36a1463e2a3bcc26915ec6777ab1. 16 June 2016, 02:44:13 UTC
53f1a9d Kmer count comparison of kmc-abyss 16 June 2016, 02:33:37 UTC
8272d1e Checking seqLen>= kmerLen 08 June 2016, 01:48:25 UTC
a4049ad formatted ntcard.cpp 08 June 2016, 01:15:07 UTC
e1c6b46 reading BAM and gzip files 08 June 2016, 01:13:39 UTC
0c918c6 FastaReader added 07 June 2016, 18:21:37 UTC
ce5fa36 Update ntcard.cpp 03 June 2016, 22:31:35 UTC
44360a0 Update ntcard.cpp 03 June 2016, 22:20:24 UTC
f90e292 Update ntcard.cpp 03 June 2016, 22:20:07 UTC
f97b25e Reading from fasta file, gz file, and estimating canonical form added 03 June 2016, 22:17:51 UTC
37d1c3c Multiple file option added 03 June 2016, 19:08:03 UTC
1f31930 Initial parallel version 03 June 2016, 18:57:03 UTC
2241563 Parameter tuning 02 June 2016, 23:35:38 UTC
cf5dbd9 Parameter tuning 02 June 2016, 23:31:47 UTC
37db140 bfcard added 02 June 2016, 16:05:59 UTC
52cd119 ntcard first working version 02 June 2016, 16:05:24 UTC
738359f ntcard.cpp: initial commit 31 May 2016, 18:27:04 UTC
8814ba8 Adding test folder 30 May 2016, 23:27:43 UTC
fcbc7f6 ntcard.cpp: style fixed 30 May 2016, 23:21:47 UTC
cb82ceb ntcard.cpp: initial commit 30 May 2016, 23:17:53 UTC
3ad0ba7 Initial commit 30 May 2016, 23:15:43 UTC
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