https://github.com/jhbadger/APIS
Revision cedb1bbca42dd06094db03ac0b517a889d4b8b4c authored by Jonathan Badger on 17 August 2011, 19:32:14 UTC, committed by Jonathan Badger on 17 August 2011, 19:32:14 UTC
1 parent 67d3efe
Tip revision: cedb1bbca42dd06094db03ac0b517a889d4b8b4c authored by Jonathan Badger on 17 August 2011, 19:32:14 UTC
remove apisRun, _input from dataset name on grid
remove apisRun, _input from dataset name on grid
Tip revision: cedb1bb
| File | Mode | Size |
|---|---|---|
| public | ||
| tests | ||
| tmp | ||
| views | ||
| ApisDB.rb | -rw-r--r-- | 6.5 KB |
| Apis_Active.rb | -rw-r--r-- | 4.8 KB |
| BlastReport.rb | -rw-r--r-- | 2.7 KB |
| ComboDB-metadata.rb | -rw-r--r-- | 1.3 KB |
| ComboDB.rb | -rw-r--r-- | 2.9 KB |
| DBwrapper.rb | -rw-r--r-- | 23.8 KB |
| PhyloDB.rb | -rw-r--r-- | 1.7 KB |
| Phylogeny.rb | -rw-r--r-- | 14.5 KB |
| SunGrid.rb | -rw-r--r-- | 1.9 KB |
| WebApis.rb | -rw-r--r-- | 15.1 KB |
| ZFile.rb | -rw-r--r-- | 797 bytes |
| apis.rb | -rw-r--r-- | 10.4 KB |
| apisDumpFasta | -rwxr-xr-x | 2.7 KB |
| apisPercentComplete | -rwxr-xr-x | 1.4 KB |
| apisPie | -rwxr-xr-x | 4.7 KB |
| apisRun | -rwxr-xr-x | 4.0 KB |
| buildTaxonomyFile | -rwxr-xr-x | 870 bytes |
| comparePhyloDB | -rwxr-xr-x | 1.8 KB |
| createApisCSV | -rwxr-xr-x | 7.1 KB |
| createApisDB | -rwxr-xr-x | 636 bytes |
| createApisGFF | -rwxr-xr-x | 3.1 KB |
| csv2ApisMetadata | -rwxr-xr-x | 1.4 KB |
| deleteApisDataset | -rwxr-xr-x | 1.1 KB |
| deleteComboDB | -rwxr-xr-x | 1.6 KB |
| fetchPhyloSeqs | -rwxr-xr-x | 2.5 KB |
| findNeighbors | -rwxr-xr-x | 3.3 KB |
| findTrees | -rwxr-xr-x | 5.3 KB |
| jcvi_config.ru | -rw-r--r-- | 437 bytes |
| loadPhyloDB | -rwxr-xr-x | 3.6 KB |
| parseGenBank2Combo | -rwxr-xr-x | 7.2 KB |
| populateApisBlast | -rwxr-xr-x | 1.9 KB |
| populateComboTaxonomy | -rwxr-xr-x | 1.6 KB |
| reannotateAPIS | -rwxr-xr-x | 1.4 KB |
| reclassifyAPIS | -rwxr-xr-x | 2.2 KB |
| relaxClassifyCSV | -rwxr-xr-x | 2.1 KB |
| sample_config.ru | -rwxr-xr-x | 260 bytes |
| simulateReads | -rwxr-xr-x | 2.8 KB |
| writeComboDB | -rwxr-xr-x | 6.2 KB |
Computing file changes ...
