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https://github.com/genome/genome
23 March 2024, 19:04:16 UTC
Revision d30e79dda52ad754f407f2860c962389917db9dc authored by Gabriel Sanderson on 29 May 2014, 22:50:42 UTC, committed by Susanna Siebert on 04 June 2014, 19:25:27 UTC 
Added partially-complete modules for the FPKM expert.
 
Adaptor - Works. Should be done, unless we need other properties later.

Expert.pm, Run.pm, and RunResult.pm - Works, very small modules anyways.

Expert.t - Works, test passes but the expected vcf is not yet correct
(No FPKM values are added, gmt vcf annotate tool probably does not work yet).
1 parent 6aa14d3
History
Tip revision: d30e79dda52ad754f407f2860c962389917db9dc authored by Gabriel Sanderson on 29 May 2014, 22:50:42 UTC
Added partially-complete modules for the FPKM expert.
Tip revision: d30e79d
File Mode Size
alignment_summary @ 8932081
bam-readcount @ c044123
bam-window @ 572bfaf
bassovac @ 41b7bc4
bin
bmm @ 311e4d9
breakdancer @ 8f07f3d
configuration-manager @ f719544
copyCat @ 78b25a7
cron @ 584bc07
fqgrep @ fe0206d
genome-db-cosmic @ bdec904
genome-db-omim @ d9b949a
genome-db-pfam @ e5acfb0
genome-music
genome-music-testdata @ 860ea75
genome-snapshot-deps @ a7f9bd1
genome-snapshot-testdata @ 72c0ded
genome-sys-user
genome-webserver
genome-www
getopt-complete @ 145c9c6
gms-config @ 6ccaa62
gmt-sys-vmbuilder
graphite @ be02103
hooks
init
jenkins @ 7d04db6
joinx @ e83e763
lib
pairoscope @ 5fdcd27
sciClone @ 723cadc
scripts
sff2fastq @ b815f97
somatic-sniper @ b83aab3
sqitch
tgi-etc @ 08ba1a6
tigra @ 6fe6b74
tigra-sv @ 715dda8
ur @ f9a7c8d
varscan @ 83ae9d8
vendor
workflow @ 44229b0
.gitignore -rw-r--r-- 302 bytes
.gitmodules -rw-r--r-- 9.7 KB
.mailmap -rw-r--r-- 301 bytes
.test-tracker.conf -rw-r--r-- 365 bytes
LICENSE -rw-r--r-- 7.5 KB
README -rw-r--r-- 155 bytes
WHERE_TO_PUT_CODE -rw-r--r-- 2.4 KB
create-c-project.sh -rwxr-xr-x 2.9 KB
create-project -rwxr-xr-x 2.9 KB
test-data-relocate-me l--------- 46 bytes

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