https://github.com/ctlab/quant3p
Revision d8acedeafb2cc99b55b7895e7c58f5fe090cc0f6 authored by Alexey Sergushichev on 28 November 2014, 09:34:40 UTC, committed by Alexey Sergushichev on 28 November 2014, 09:34:40 UTC
1 parent a53dbaf
Tip revision: d8acedeafb2cc99b55b7895e7c58f5fe090cc0f6 authored by Alexey Sergushichev on 28 November 2014, 09:34:40 UTC
FIxing alignment quality for multimappers
FIxing alignment quality for multimappers
Tip revision: d8acede
setup.py
from setuptools import setup
setup(name='quant3p',
version='0.1',
description='Tools to do 3\' RNA-seq quantification',
url='http://github.com/ctlab/quant3p',
author='Alexey Sergushichev',
author_email='alserg@rain.ifmo.ru',
license='Apache2',
packages=['quant3p'],
install_requires=[
'HTSeq',
'pysam',
'macs2 >= 2.1.0'
],
scripts=['bin/macs2-stranded', 'bin/quant3p'],
entry_points = {
'console_scripts': [
'fix-mm=quant3p.fixmm:main',
'gtf-extend=quant3p.gtfextend:main'],
},
zip_safe=False)
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