Revision e2cf64935e44f24cb7456aa25227cbc920fb8d04 authored by Erik Garrison on 10 December 2015, 22:14:35 UTC, committed by Erik Garrison on 10 December 2015, 22:14:35 UTC
TODO: handle reference-matching bits of alleles; these are currently skipped.
1 parent 8319bec
Dockerfile
FROM ubuntu:14.04
MAINTAINER Erik Garrison <erik.garrison@gmail.com>
# Make sure the en_US.UTF-8 locale exists, since we need it for tests
RUN locale-gen en_US en_US.UTF-8 && dpkg-reconfigure locales
# Set up for make get-deps
RUN mkdir /app
WORKDIR /app
COPY Makefile /app/Makefile
# Install vg dependencies and clear the package index
RUN \
apt-get update && \
apt-get install -y \
build-essential \
pkg-config
sudo && \
make get-deps && \
rm -rf /var/lib/apt/lists/*
# Move in all the other files
COPY . /app
# Build vg
RUN make -j8
# Make tests. We can't do it in parallel since it cleans up the test binary
RUN make test
ENTRYPOINT ["/app/vg"]
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