https://github.com/ekg/freebayes
Revision e77a43f5097ea7eee432ee765049c6b246d49baa authored by Erik Garrison on 04 December 2014, 17:51:40 UTC, committed by Erik Garrison on 04 December 2014, 17:51:40 UTC
Picard and GATK generate .bam/.bai rather than .bam/.bam.bai index names.

This commit adds functionality which checks if .bam.bai exists, and if not
falls back .bai (or .bam.bti).
1 parent 13cac54
History
Tip revision: e77a43f5097ea7eee432ee765049c6b246d49baa authored by Erik Garrison on 04 December 2014, 17:51:40 UTC
add support for detecting Picard-style naming of bam indexes
Tip revision: e77a43f
File Mode Size
docs
src
.gitignore -rw-r--r-- 57 bytes
CMakeLists.txt -rw-r--r-- 1.8 KB
LICENSE -rw-r--r-- 1.1 KB
README -rw-r--r-- 2.0 KB

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