Revision f4e2b677a1e62980753a44fd735ca02778f84993 authored by Emmanuel Paradis on 07 February 2009, 00:00:00 UTC, committed by Gabor Csardi on 07 February 2009, 00:00:00 UTC
1 parent de9f31f
Raw File
cynipids.txt
#NEXUS
[LWRh data from Rokas et al. 2002. Molecular Phylogenetics and Evolution 22:206-219]
BEGIN DATA;
  DIMENSIONS NTAX=8 NCHAR=159;
  FORMAT MISSING=? GAP=- DATATYPE=PROTEIN INTERLEAVE=YES;
  MATRIX
    Barbotinia_oraniensis            LGPFICEIYAMLGSLFGCGSIWTMCMIAFDRYNVIVKGLAGKPLTISGAI
    Synergus_gallaepomiformis        LGPFICEMYGMFGSLFGCGSIWTMCMIAFDRYNVIVKGLVGKPLTISGAI
    Periclistus_brandtii             LGPFMCEIYAMLGSLFGCGSIWTMCMIAFDRYNVIVKGLAGKPLSISGAI
    Panteliella_bicolor              LGPFLCEMYGMFGSLFGCGSIWTMCMIAFDRYNVIVKGLAGKPLTITGAI
    Plagiotrochus_quercusilicis      HGPFMCEMYAMFGSLFGCGSIWTMCMIAFDRYNVIVKGLAGKPLTISGAI
    Andricus_curvator                LGPFMCEIYAMLGSLFGCGSIWTMCMIAFDRYNVIVKGLAGKPLTISGAI
    Andricus_kollari                 LGPFMCEIYAMLGSLFGCVSIWTMCMIAFDRYNVIVKGLAGKPLTISGAI
    Diplolepis_rosae                 -GPFLCEIYALLGSLFGCGSIWTMCMIAFDRYNVIVKGLAGKPLTITGAI

    Barbotinia_oraniensis            LRIVFLWVWAVVWTIAPMIGWNRYVPEGNMTACGTDYLTKDWFSRSYILV
    Synergus_gallaepomiformis        LRIAFLWIWAVIWTIAPMIGWNRYVPEGNMTACGTDYLSKDWFSRSYIIV
    Periclistus_brandtii             LRIVGLWVWAVIWTIAPMIGWNRYVPEGNLTACGTDYLSKDWLSRSYILV
    Panteliella_bicolor              LRIVGLWVWAVIWTIAPMIGWNRYVPEGNMTACGTDYLNKDWFSRSYILI
    Plagiotrochus_quercusilicis      LRIVGLWVWAVIWTIAPMLGWNRYVPEGNMTACGTDYLTKDWFSRSYILV
    Andricus_curvator                LRIVGLWVWAVIWTIAPMLGWNRYVPEGNMTACGTDYLSKDWFSRSYILV
    Andricus_kollari                 LRIVGLWVWAIIWTIAPMLGWNRYVPEGNMTACGTDYLSKDWFSRSYIIV
    Diplolepis_rosae                 IRIIGLWVWAIIWTIAPMFGWNRYVPEGNMTACGTDYLSKDWFSRSYILV

    Barbotinia_oraniensis            YSVFVYFMPLFLIIYSYYFIIAAVSAHEKAMREQAKKMNVASLRSSDNQN
    Synergus_gallaepomiformis        YSVFVYFMPLFLIIYSYYFIIAAVSAHEKAMREQAKKMNVASLRSSDNQN
    Periclistus_brandtii             YSVFVYFMPLFLIIYSYYFIIAAVSAHEKAMREQAKKMNVASLRSSDNQN
    Panteliella_bicolor              YSVFVYFMPLFLIIYSYYFIIAAVSAHEKAMREQAKKMNVASLRSSDNQN
    Plagiotrochus_quercusilicis      YSVFVYFMPLFLIIYSYYFIIAAVTAHEKAMREQAKKMNVASLRSSDNQN
    Andricus_curvator                YSIFVYFMPLFLIIYSYYFIIAAVTAHEKAMREQAKKMNVASLRSSDNQN
    Andricus_kollari                 YSIFVYFMPLFLIIYSYYFIIAAVTAHEKAMREQAKKMNVASLRSSDNQN
    Diplolepis_rosae                 YSIFVYYMPLFLIIYSYYFIISAVSAHEKAMREQAKKMNVASLRSSDNAN

    Barbotinia_oraniensis            TSAEHKLAK
    Synergus_gallaepomiformis        TSAEHKLAK
    Periclistus_brandtii             TSAEHKLAK
    Panteliella_bicolor              TSAEHKLAK
    Plagiotrochus_quercusilicis      TSAEHKLAK
    Andricus_curvator                TSAEHKLAK
    Andricus_kollari                 TSAEHKLAK
    Diplolepis_rosae                 TSAEHKLAK
  ;
END;

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