| fcc8496 | anneodonnell | 23 January 2019, 02:23:43 UTC | Add files via upload Haploinsufficient genes, all developmental disorders. 50 highly penetrant, severe condition autosomal disease genes; 11 genes on X chromosome are highly penetrant, severe or lethal condition in males, moderate or severe condition in females. Gene used in Cummings et al. Transcript annotation paper. | 23 January 2019, 02:23:43 UTC |
| 1bc87f3 | Konrad Karczewski | 17 January 2019, 14:36:57 UTC | Update haploinsufficiency_mild_curated_2016.tsv | 17 January 2019, 14:36:57 UTC |
| a94c0b1 | Konrad Karczewski | 17 January 2019, 14:36:40 UTC | Update haploinsufficiency_moderate_curated_2016.tsv | 17 January 2019, 14:36:40 UTC |
| 3ea3e18 | Konrad Karczewski | 17 January 2019, 14:36:25 UTC | Update haploinsufficiency_severe_curated_2016.tsv | 17 January 2019, 14:36:25 UTC |
| ba766b4 | anneodonnell | 17 January 2019, 03:43:29 UTC | Updated curated haploinsufficiency gene lists Curated by Anne O'Donnell-Luria and Emma Hoffman-Pierce | 17 January 2019, 03:43:29 UTC |
| dc62221 | Eric Minikel | 13 December 2018, 00:16:51 UTC | Merge pull request #11 from QingboWang/master Adding core essential/non-essential genes from CRISPR/Cas experiments | 13 December 2018, 00:16:51 UTC |
| 20c6b4a | QingboWang | 11 December 2018, 22:03:45 UTC | Non essential genes from CRISPR/Cas experiments | 11 December 2018, 22:03:45 UTC |
| fb8b516 | QingboWang | 11 December 2018, 22:03:29 UTC | Delete NEGv1_subset_universe.tsv | 11 December 2018, 22:03:29 UTC |
| 695e49c | QingboWang | 11 December 2018, 22:02:07 UTC | Update README.md | 11 December 2018, 22:02:07 UTC |
| 7a26a84 | QingboWang | 11 December 2018, 22:01:02 UTC | Non essential genes from CRISPR/Cas experiments | 11 December 2018, 22:01:02 UTC |
| 3f5212d | QingboWang | 11 December 2018, 21:55:14 UTC | Update README.md | 11 December 2018, 21:55:14 UTC |
| 86ed03c | QingboWang | 11 December 2018, 21:54:34 UTC | Core essential genes from CRISPR/Cas experiments | 11 December 2018, 21:54:34 UTC |
| ecd22a2 | QingboWang | 11 December 2018, 21:54:06 UTC | Delete CEGv2_subset_universe.tsv | 11 December 2018, 21:54:06 UTC |
| 7315518 | QingboWang | 11 December 2018, 21:52:25 UTC | Core essential genes from CRISPR/Cas experiments | 11 December 2018, 21:52:25 UTC |
| dd19697 | QingboWang | 11 December 2018, 21:50:16 UTC | Update README.md Feel free to make further modifications if the format is wrong etc. | 11 December 2018, 21:50:16 UTC |
| 4c99f3c | QingboWang | 11 December 2018, 21:39:13 UTC | Add files via upload | 11 December 2018, 21:39:13 UTC |
| 21ea154 | ericminikel | 13 September 2018, 17:45:19 UTC | more updated scripts | 13 September 2018, 17:45:19 UTC |
| 9786a10 | ericminikel | 13 September 2018, 17:44:59 UTC | kinases | 13 September 2018, 17:44:59 UTC |
| 67b7311 | ericminikel | 13 September 2018, 17:44:45 UTC | new scripts for updating these lists | 13 September 2018, 17:44:45 UTC |
| c531e12 | ericminikel | 13 September 2018, 17:00:37 UTC | updated GWAS catalog | 13 September 2018, 17:00:37 UTC |
| 6601a29 | ericminikel | 13 September 2018, 16:42:14 UTC | GPCRs | 13 September 2018, 16:42:14 UTC |
| c18d447 | ericminikel | 13 September 2018, 16:22:57 UTC | updated with new guidetopharmacology.org dataset (much smaller list than before) | 13 September 2018, 16:22:57 UTC |
| 10eb9a9 | ericminikel | 13 September 2018, 16:16:52 UTC | updated numbers after mapping new gene symbols | 13 September 2018, 16:16:52 UTC |
| 7b18b7e | ericminikel | 13 September 2018, 16:15:06 UTC | updated HGNC gene symbols | 13 September 2018, 16:15:06 UTC |
| 8c937b4 | ericminikel | 13 September 2018, 16:11:49 UTC | grab the level 3 entries out of latest clingen | 13 September 2018, 16:11:49 UTC |
| 252df25 | ericminikel | 13 September 2018, 16:10:33 UTC | clingen HI updated | 13 September 2018, 16:10:33 UTC |
| 91515c1 | ericminikel | 13 September 2018, 14:18:55 UTC | ran Konrad's hom lof tolerant code | 13 September 2018, 14:18:55 UTC |
| 1ad75ae | ericminikel | 13 September 2018, 14:14:49 UTC | updated with HGNC symbols 2018-09-13 | 13 September 2018, 14:14:49 UTC |
| 12f34a8 | ericminikel | 13 September 2018, 13:52:21 UTC | 385 | 13 September 2018, 13:52:21 UTC |
| 6b0489f | ericminikel | 13 September 2018, 13:51:57 UTC | updated HGNC gene symbols | 13 September 2018, 13:51:57 UTC |
| f3ef09b | ericminikel | 13 September 2018, 13:38:14 UTC | updated FDA-approved drug targets with new data pull from drugbank | 13 September 2018, 13:38:14 UTC |
| 07f6c1a | Eric Minikel | 06 July 2018, 18:30:21 UTC | resolved even more conflicts. always pull before pushing | 06 July 2018, 18:30:21 UTC |
| a43f80e | Eric Minikel | 06 July 2018, 18:29:03 UTC | resolved conflicts | 06 July 2018, 18:29:03 UTC |
| 9b176c2 | Eric Minikel | 06 July 2018, 18:28:14 UTC | GPI-anchored proteins | 06 July 2018, 18:28:14 UTC |
| 34b59cb | Eric Minikel | 01 November 2017, 16:32:39 UTC | Merge pull request #9 from shusson/ACMG_v2_0 add ACMG v2.0 gene list | 01 November 2017, 16:32:39 UTC |
| 607fa70 | Shane Husson | 01 November 2017, 01:23:40 UTC | add ACMG v2.0 http://www.nature.com/gim/journal/v19/n2/abs/gim2016190a.html | 01 November 2017, 01:54:29 UTC |
| 2714e11 | Eric Minikel | 28 March 2017, 12:58:14 UTC | Merge pull request #7 from zx8754/patch-3 Added BROCA list | 28 March 2017, 12:58:14 UTC |
| 45ff22d | Eric Minikel | 28 March 2017, 12:58:04 UTC | Merge pull request #6 from zx8754/patch-2 Create BROCA.R | 28 March 2017, 12:58:04 UTC |
| 17f6563 | Eric Minikel | 28 March 2017, 12:57:53 UTC | Merge pull request #5 from zx8754/patch-1 Create BROCA_Cancer_Risk_Panel.tsv | 28 March 2017, 12:57:53 UTC |
| 8952349 | Tokhir Dadaev | 28 March 2017, 11:51:15 UTC | Added BROCA list | 28 March 2017, 11:51:15 UTC |
| 665b7c2 | Tokhir Dadaev | 28 March 2017, 11:44:11 UTC | Create BROCA.R | 28 March 2017, 11:44:11 UTC |
| 5d08234 | Tokhir Dadaev | 28 March 2017, 11:42:36 UTC | Create BROCA_Cancer_Risk_Panel.tsv | 28 March 2017, 11:42:36 UTC |
| 0d0c637 | Daniel Birnbaum | 23 May 2016, 14:22:01 UTC | New key for accessing OMIM API hard-coded to parse_omim script. Also, re-downloaded OMIM data | 23 May 2016, 14:22:01 UTC |
| 95f8cf8 | Daniel Birnbaum | 03 March 2016, 03:19:15 UTC | Regenerated OMIM files with more transparent gene name translations | 03 March 2016, 03:19:15 UTC |
| a166cbe | Daniel Birnbaum | 15 January 2016, 22:54:19 UTC | Added multiple versions of OMIM table: one with gene names taken straight from OMIM, another with an attempt to simplify gene names to reflect accepted HGNC convention. Also, cleaned up OMIM parsing code. | 15 January 2016, 22:54:19 UTC |
| bbf6350 | Daniel Birnbaum | 18 December 2015, 15:32:50 UTC | updated OMIM table | 18 December 2015, 15:32:50 UTC |
| 5e05d66 | ksamocha | 21 October 2015, 00:23:16 UTC | FMRP interactors list | 21 October 2015, 00:23:16 UTC |
| 2aad805 | Eric Minikel | 24 September 2015, 18:36:19 UTC | added code link | 24 September 2015, 18:36:19 UTC |
| fa28ee3 | Eric Minikel | 24 September 2015, 18:35:45 UTC | added X-linked clinvar | 24 September 2015, 18:35:45 UTC |
| 6b847d7 | Eric Minikel | 24 September 2015, 18:32:23 UTC | X-linked ClinVar symbols meeting certain criteria | 24 September 2015, 18:32:23 UTC |
| 96e3cfa | Eric Minikel | 24 September 2015, 18:32:11 UTC | extract X-linked ClinVar symbols meeting certain criteria | 24 September 2015, 18:32:11 UTC |
| 1649e96 | Eric Minikel | 25 August 2015, 01:14:50 UTC | parsing birnie's table to yield flat lists and a gene-phenotype table | 25 August 2015, 01:14:50 UTC |
| fe796bf | Eric Minikel | 22 July 2015, 17:46:16 UTC | Dancik 2010 | 22 July 2015, 17:46:16 UTC |
| 51ad257 | Eric Minikel | 22 July 2015, 17:46:05 UTC | natural product targets from Dancik 2010 | 22 July 2015, 17:46:05 UTC |
| bc72a23 | Eric Minikel | 22 July 2015, 17:06:25 UTC | added a space | 22 July 2015, 17:06:25 UTC |
| fcf0150 | Eric Minikel | 22 July 2015, 17:05:59 UTC | GPCRs | 22 July 2015, 17:05:59 UTC |
| 48e5f43 | Eric Minikel | 22 July 2015, 17:03:21 UTC | GPCRs from guidetopharmacology.org | 22 July 2015, 17:03:21 UTC |
| c33c87b | Eric Minikel | 22 July 2015, 17:03:10 UTC | get GPCR list from guidetopharmacology.org | 22 July 2015, 17:03:10 UTC |
| 7aea21b | bernie | 17 June 2015, 04:34:22 UTC | Fixed simplification of gene symbol to approved symbol according to HGNC. | 17 June 2015, 04:34:22 UTC |
| 1d8a604 | bernie | 17 June 2015, 03:51:49 UTC | quick fix. | 17 June 2015, 03:51:49 UTC |
| 7cfaf37 | bernie | 17 June 2015, 03:43:10 UTC | Created thesaurus file with 2 columns: approved symbol, synonymous symbols. Modified omim_api.py to use this thesaurus file. Added the new OMIM table resulting from these changes. | 17 June 2015, 03:43:10 UTC |
| 2fae74b | bernie | 15 June 2015, 17:54:58 UTC | Added script omim_api.py for querying OMIM. Also, added output of that script: omim_table.tsv. | 15 June 2015, 17:54:58 UTC |
| e16d33f | Eric Minikel | 01 June 2015, 23:02:13 UTC | Scraped kinase list from UniProt | 01 June 2015, 23:02:13 UTC |
| 4cf2b5a | Eric Minikel | 23 May 2015, 21:02:56 UTC | fixed link for ClinGen Haploinsufficient | 23 May 2015, 21:02:56 UTC |
| a212ca7 | Eric Minikel | 12 May 2015, 15:55:05 UTC | readme about clinvar list | 12 May 2015, 15:55:05 UTC |
| a90052b | Eric Minikel | 12 May 2015, 15:52:40 UTC | genes with at least one variant asserted as pathogenic or likely pathogenic in ClinVar as of 2015-05-12 | 12 May 2015, 15:52:40 UTC |
| 49725fd | Eric Minikel | 04 May 2015, 19:43:31 UTC | different way of checking if in dictionary per @konradjk's suggestion | 04 May 2015, 19:43:31 UTC |
| 69a8fa7 | Eric Minikel | 04 May 2015, 19:41:20 UTC | added citation for olfactory receptors | 04 May 2015, 19:41:20 UTC |
| d8a9c1a | Eric Minikel | 04 May 2015, 19:38:52 UTC | olfactory receptor list from Mainland et al 2015 | 04 May 2015, 19:38:52 UTC |
| f6a9f22 | Eric Minikel | 04 May 2015, 19:38:39 UTC | grab olfactory receptor list from Mainland et al 2015 | 04 May 2015, 19:38:39 UTC |
| 17ecb80 | Eric Minikel | 04 May 2015, 19:37:00 UTC | using get() instead of [] for dict to avoid KeyError | 04 May 2015, 19:37:00 UTC |
| 01a678e | Eric Minikel | 04 May 2015, 19:34:43 UTC | command line script to update a list of gene symbols | 04 May 2015, 19:34:43 UTC |
| beae602 | Eric Minikel | 01 April 2015, 19:10:46 UTC | fixed citations | 01 April 2015, 19:10:46 UTC |
| 18a88bb | Eric Minikel | 01 April 2015, 19:10:23 UTC | shortened more URLs | 01 April 2015, 19:10:23 UTC |
| 1d0cbd0 | Eric Minikel | 01 April 2015, 19:09:58 UTC | shortened URLs and standardized citation formats | 01 April 2015, 19:09:58 UTC |
| 092ab3a | Eric Minikel | 01 April 2015, 19:06:54 UTC | fixed more conflicts | 01 April 2015, 19:06:54 UTC |
| 2715206 | Eric Minikel | 01 April 2015, 19:06:02 UTC | Merge pull request #4 from zx8754/patch-3 DNA Repair Genes by Kang J - DRG_KangJ.tsv | 01 April 2015, 19:06:02 UTC |
| 1cbae51 | Eric Minikel | 01 April 2015, 19:05:51 UTC | fixed conflicts | 01 April 2015, 19:05:51 UTC |
| 535af11 | Eric Minikel | 01 April 2015, 19:05:09 UTC | merged README changes from Tokhir Dadaev | 01 April 2015, 19:05:09 UTC |
| a92d6a8 | Eric Minikel | 01 April 2015, 19:03:18 UTC | Merge pull request #2 from zx8754/patch-2 Output file from DRG_WoodRD.R script | 01 April 2015, 19:03:18 UTC |
| ca051bb | Eric Minikel | 01 April 2015, 19:03:09 UTC | Merge pull request #1 from zx8754/patch-1 DNA Repair Genes - WoodRD list - DRG_WoodRD.R script | 01 April 2015, 19:03:09 UTC |
| e3b3b1e | ksamocha | 01 April 2015, 03:34:40 UTC | Included description of ClinGen | 01 April 2015, 03:34:40 UTC |
| 2072a97 | ksamocha | 01 April 2015, 03:33:41 UTC | removing old file | 01 April 2015, 03:33:41 UTC |
| dce75e1 | ksamocha | 01 April 2015, 03:23:49 UTC | ClinGen dosage sensitive genes (evidence level 3) | 01 April 2015, 03:23:49 UTC |
| ede4c6e | ksamocha | 01 April 2015, 03:15:21 UTC | Added ClinGen dosage sensitivity genes (level 3 evidence) | 01 April 2015, 03:15:21 UTC |
| cda9293 | Tokhir Dadaev | 31 March 2015, 17:19:26 UTC | Description for KangJ DRG list | 31 March 2015, 17:19:26 UTC |
| a53a1c6 | Tokhir Dadaev | 31 March 2015, 17:06:54 UTC | Create DRG_KangJ.tsv | 31 March 2015, 17:06:54 UTC |
| 9bdbc3f | Tokhir Dadaev | 31 March 2015, 16:38:25 UTC | DRG_WoodRD Gene list description added | 31 March 2015, 16:38:25 UTC |
| 2cac3d1 | Tokhir Dadaev | 31 March 2015, 16:16:02 UTC | Output file from DRG_WoodRD.R script | 31 March 2015, 16:16:02 UTC |
| b15a28d | Tokhir Dadaev | 31 March 2015, 16:09:53 UTC | Update DRG_WoodRD.R | 31 March 2015, 16:09:53 UTC |
| 9297f18 | Tokhir Dadaev | 31 March 2015, 16:07:52 UTC | Create DRG_WoodRD.R Extract DNA Repair Genes from WoodRD website - http://sciencepark.mdanderson.org/labs/wood/dna_repair_genes.html | 31 March 2015, 16:07:52 UTC |
| 8601df2 | Eric Minikel | 26 February 2015, 16:52:04 UTC | universe | 26 February 2015, 16:52:04 UTC |
| 2bcca3c | Eric Minikel | 23 February 2015, 23:16:15 UTC | changed confusing variable name | 23 February 2015, 23:16:15 UTC |
| d97e20c | Eric Minikel | 23 February 2015, 23:08:21 UTC | MGI essential gene list | 23 February 2015, 23:08:21 UTC |
| 1b4e06d | Eric Minikel | 23 February 2015, 23:03:55 UTC | MGI essential gene list | 23 February 2015, 23:03:55 UTC |
| dc4f519 | Eric Minikel | 23 February 2015, 23:03:45 UTC | MGI essential genes list | 23 February 2015, 23:03:45 UTC |
| c17f2b1 | Eric Minikel | 23 February 2015, 22:59:28 UTC | typo | 23 February 2015, 22:59:28 UTC |
| dac7e3c | Karol | 23 February 2015, 20:15:10 UTC | GWAS catalog genes, now tab delimited | 23 February 2015, 20:15:10 UTC |
| a06ab7f | Eric Minikel | 23 February 2015, 20:05:14 UTC | updated readme on gwas list | 23 February 2015, 20:05:14 UTC |
| cf34568 | Eric Minikel | 23 February 2015, 20:04:44 UTC | renamed, removed erroneous lines, removed dups | 23 February 2015, 20:04:44 UTC |
