Revision fe53297356da5f02478fe9cafab5d9914a36d2be authored by Thorsten Becker on 14 August 2007, 03:33:21 UTC, committed by Thorsten Becker on 14 August 2007, 03:33:21 UTC
  spacing to top and lower layers of shell. The
  coor_refine=0.1,0.15,0.1,0.2 parameters specify the radius fraction
  of the bottom layer [0], the fraction of the nodes in this layer
  [1], the top layer fraction [2], and the top layer node fraction
  [3]. I.e. the defaults will put 15% of all nz nodes into the 10%
  lower layer, 20% in the top 10% upper layer, and the rest in
  between.
  

- renamed gzipped output version with sub-directory storage ascii-gz

- built in restart facilities for temperature and tracers when using
  ascii-gz I/O with vtkio != 2


- added a composition viscosity function, CDEPV, based on two tracer
  flavors

  - for this to work, I had to move viscosity_input() *behind*
    tic_input() and tracer_input() in instructions


- added tracer_enriched option for internal heating. If tracer = on
  and tracer_enriched = on, will reader Q0_enriched and vary the element heat production 
  between Q0 for C = 0 and Q0_enriched for C = 1. I.e. this only works
  if C varies between 0 and 1.


- added an option to write from all processros to a single VTK file,
  if ascii-gz is activated, and vtkio = 2. The VTK output is of the
  "legacy", serial, single-file type, and requires that all processors see the same 
   filesystem. 

   This will lead to a bottleneck for large # of CPU computations as
   each processor has to wait til the previous is done. 

   More efficient I/O should be possible by using the distributed
   storage version of VTK, but I have no clue how this works. Anyone?







1 parent d6e512c
Raw File
Process_buoyancy.c
/*
 *~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 *
 *<LicenseText>
 *
 * CitcomS by Louis Moresi, Shijie Zhong, Lijie Han, Eh Tan,
 * Clint Conrad, Michael Gurnis, and Eun-seo Choi.
 * Copyright (C) 1994-2005, California Institute of Technology.
 *
 * This program is free software; you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
 * the Free Software Foundation; either version 2 of the License, or
 * (at your option) any later version.
 *
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU General Public License for more details.
 *
 * You should have received a copy of the GNU General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
 *
 *</LicenseText>
 *
 *~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 */
/*  Here are the routines which process the results of each buoyancy solution, and call
    any relevant output routines. Much of the information has probably been output along
    with the velocity field. (So the velocity vectors and other data are fully in sync).
    However, heat fluxes and temperature averages are calculated here (even when they
    get output the next time around the velocity solver);
    */


#include "element_definitions.h"
#include "global_defs.h"
#include <math.h>		/* for sqrt */


void post_processing(struct All_variables *E)
{
  return;
}



/* ===================
    Surface heat flux
   =================== */

void heat_flux(E)
    struct All_variables *E;
{
    int m,e,el,i,j,node,lnode;
    float *flux[NCS],*SU[NCS],*RU[NCS];
    float VV[4][9],u[9],T[9],dTdz[9],area,uT;
    float *sum_h;
    double rtf[4][9];

    struct Shape_function GN;
    struct Shape_function_dA dOmega;
    struct Shape_function_dx GNx;
    void get_global_shape_fn();
    void velo_from_element();
    void sum_across_surface();
    void return_horiz_ave();
    void return_horiz_ave_f();

    const int dims=E->mesh.nsd,dofs=E->mesh.dof;
    const int vpts=vpoints[dims];
    const int ppts=ppoints[dims];
    const int ends=enodes[dims];
    const int nno=E->lmesh.nno;
    const int lev = E->mesh.levmax;
    const int sphere_key=1;


  sum_h = (float *) malloc((5)*sizeof(float));
  for(i=0;i<=4;i++)
    sum_h[i] = 0.0;

  for(m=1;m<=E->sphere.caps_per_proc;m++) {

    flux[m] = (float *) malloc((1+nno)*sizeof(float));

    for(i=1;i<=nno;i++)   {
      flux[m][i] = 0.0;
      }

    for(e=1;e<=E->lmesh.nel;e++) {
      get_global_shape_fn(E,e,&GN,&GNx,&dOmega,0,sphere_key,rtf,lev,m);

      velo_from_element(E,VV,m,e,sphere_key);

      for(i=1;i<=vpts;i++)   {
        u[i] = 0.0;
        T[i] = 0.0;
        dTdz[i] = 0.0;
        for(j=1;j<=ends;j++)  {
          u[i] += VV[3][j]*E->N.vpt[GNVINDEX(j,i)];
          T[i] += E->T[m][E->ien[m][e].node[j]]*E->N.vpt[GNVINDEX(j,i)];
          dTdz[i] += -E->T[m][E->ien[m][e].node[j]]*GNx.vpt[GNVXINDEX(2,j,i)];
          }
        }

      uT = 0.0;
      area = 0.0;
      for(i=1;i<=vpts;i++)   {
        uT += u[i]*T[i]*dOmega.vpt[i] + dTdz[i]*dOmega.vpt[i];
        }

      uT /= E->eco[m][e].area;

      for(j=1;j<=ends;j++)
        flux[m][E->ien[m][e].node[j]] += uT*E->TWW[lev][m][e].node[j];

      }             /* end of e */
    }             /* end of m */


  (E->exchange_node_f)(E,flux,lev);

  for(m=1;m<=E->sphere.caps_per_proc;m++)
     for(i=1;i<=nno;i++)
       flux[m][i] *= E->MASS[lev][m][i];

  if (E->parallel.me_loc[3]==E->parallel.nprocz-1)
    for(m=1;m<=E->sphere.caps_per_proc;m++)
      for(i=1;i<=E->lmesh.nsf;i++)
        E->slice.shflux[m][i]=2*flux[m][E->surf_node[m][i]]-flux[m][E->surf_node[m][i]-1];

  if (E->parallel.me_loc[3]==0)
    for(m=1;m<=E->sphere.caps_per_proc;m++)
      for(i=1;i<=E->lmesh.nsf;i++)
        E->slice.bhflux[m][i] = 2*flux[m][E->surf_node[m][i]-E->lmesh.noz+1]
                                - flux[m][E->surf_node[m][i]-E->lmesh.noz+2];

  for(m=1;m<=E->sphere.caps_per_proc;m++)
    for(e=1;e<=E->lmesh.snel;e++) {
         uT =(E->slice.shflux[m][E->sien[m][e].node[1]] +
              E->slice.shflux[m][E->sien[m][e].node[2]] +
              E->slice.shflux[m][E->sien[m][e].node[3]] +
              E->slice.shflux[m][E->sien[m][e].node[4]])*0.25;
         el = e*E->lmesh.elz;
         sum_h[0] += uT*E->eco[m][el].area;
         sum_h[1] += E->eco[m][el].area;

         uT =(E->slice.bhflux[m][E->sien[m][e].node[1]] +
              E->slice.bhflux[m][E->sien[m][e].node[2]] +
              E->slice.bhflux[m][E->sien[m][e].node[3]] +
              E->slice.bhflux[m][E->sien[m][e].node[4]])*0.25;
         el = (e-1)*E->lmesh.elz+1;
         sum_h[2] += uT*E->eco[m][el].area;
         sum_h[3] += E->eco[m][el].area;
         }

  sum_across_surface(E,sum_h,4);

  if (E->parallel.me_loc[3]==E->parallel.nprocz-1)   {
    sum_h[0] = sum_h[0]/sum_h[1];
    /*     if (E->control.verbose && E->parallel.me==E->parallel.nprocz-1) {
	     fprintf(E->fp_out,"surface heat flux= %f %f\n",sum_h[0],E->monitor.elapsed_time);
             fflush(E->fp_out);
    } */
    if (E->parallel.me==E->parallel.nprocz-1) {
      fprintf(stderr,"surface heat flux= %f\n",sum_h[0]);
      /*fprintf(E->fp,"surface heat flux= %f\n",sum_h[0]);*/
    }
  }

  if (E->parallel.me_loc[3]==0)    {
    sum_h[2] = sum_h[2]/sum_h[3];
/*     if (E->control.verbose && E->parallel.me==0) fprintf(E->fp_out,"bottom heat flux= %f %f\n",sum_h[2],E->monitor.elapsed_time); */
    if (E->parallel.me==0) {
      fprintf(stderr,"bottom heat flux= %f\n",sum_h[2]);
      fprintf(E->fp,"bottom heat flux= %f\n",sum_h[2]);
    }
  }


  for(m=1;m<=E->sphere.caps_per_proc;m++)
    free((void *)flux[m]);

  free((void *)sum_h);

  return;
}



/*
  compute horizontal average of temperature and rms velocity
*/
void compute_horiz_avg(struct All_variables *E)
{
    void return_horiz_ave_f();

    int m, i;
    float *S1[NCS],*S2[NCS],*S3[NCS];

    for(m=1;m<=E->sphere.caps_per_proc;m++)      {
	S1[m] = (float *)malloc((E->lmesh.nno+1)*sizeof(float));
	S2[m] = (float *)malloc((E->lmesh.nno+1)*sizeof(float));
	S3[m] = (float *)malloc((E->lmesh.nno+1)*sizeof(float));
    }

    for(m=1;m<=E->sphere.caps_per_proc;m++) {
	for(i=1;i<=E->lmesh.nno;i++) {
	    S1[m][i] = E->T[m][i];
	    S2[m][i] = E->sphere.cap[m].V[1][i]*E->sphere.cap[m].V[1][i]
          	+ E->sphere.cap[m].V[2][i]*E->sphere.cap[m].V[2][i];
	    S3[m][i] = E->sphere.cap[m].V[3][i]*E->sphere.cap[m].V[3][i];
	}
    }

    return_horiz_ave_f(E,S1,E->Have.T);
    return_horiz_ave_f(E,S2,E->Have.V[1]);
    return_horiz_ave_f(E,S3,E->Have.V[2]);

    for(m=1;m<=E->sphere.caps_per_proc;m++) {
	free((void *)S1[m]);
	free((void *)S2[m]);
	free((void *)S3[m]);
    }

    for (i=1;i<=E->lmesh.noz;i++) {
	E->Have.V[1][i] = sqrt(E->Have.V[1][i]);
	E->Have.V[2][i] = sqrt(E->Have.V[2][i]);
    }

}
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