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21 May 2025, 06:38:28 UTC
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d227d50 Diego del Alamo29 August 2023, 06:28:17 UTCUpdate README.md29 August 2023, 06:28:17 UTC
694ddde Diego del Alamo01 February 2023, 07:43:16 UTCAdding default alphafold requirements01 February 2023, 07:43:16 UTC
0f6a62a Diego del Alamo23 October 2022, 09:27:20 UTCMerge pull request #13 from davidesala/patch-2 Update README.md23 October 2022, 09:27:20 UTC
2f0364c Davide Sala09 September 2022, 18:12:08 UTCUpdate README.md09 September 2022, 18:12:08 UTC
2683b5c Diego del Alamo09 September 2022, 12:41:22 UTCMerge pull request #12 from davidesala/main adding a function to predict models out of a PDB template09 September 2022, 12:41:22 UTC
dc61aa6 Davide Sala09 September 2022, 12:35:32 UTCfix repeated lined09 September 2022, 12:35:32 UTC
9e7d3f8 Davide Sala07 September 2022, 13:41:31 UTCadding a function to predict models out of a PDB template07 September 2022, 13:41:31 UTC
9f0de72 Diego del Alamo30 August 2022, 14:24:23 UTCMerge pull request #11 from davidesala/main fixing bug with mmseq2 api preventing the creation of ffindex ffdata files and the download of cif files30 August 2022, 14:24:23 UTC
026c67a Davide Sala30 August 2022, 14:05:01 UTCjust a small correction here, bug fixed30 August 2022, 14:05:01 UTC
734ceec Davide Sala30 August 2022, 13:47:03 UTCissues with mmseqs API and a bug fixed30 August 2022, 13:47:03 UTC
daef47c Diego del Alamo15 May 2022, 08:27:38 UTCMerge pull request #5 from davidesala/patch-1 Update citation in README.md15 May 2022, 08:27:38 UTC
a7ad99d Davide Sala09 May 2022, 08:22:21 UTCUpdate README.md09 May 2022, 08:22:21 UTC
588dc88 Diego del Alamo28 April 2022, 05:57:57 UTCUpdate README.md28 April 2022, 05:57:57 UTC
503d2bd Diego del Alamo28 April 2022, 05:56:36 UTCUpdate README.md28 April 2022, 05:56:36 UTC
d60db86 Diego del Alamo17 February 2022, 16:16:20 UTCUpdate predict.py17 February 2022, 16:16:20 UTC
714006d Diego del Alamo15 February 2022, 13:33:36 UTCFixing runtime error in colab Error was: "module 'jaxlib.xla_extension' has no attribute 'PmapFunction'" Solution: Setting dm-haiku to version 0.0.515 February 2022, 13:33:36 UTC
1f3a7aa Diego del Alamo04 February 2022, 09:40:39 UTCUpdate README.md04 February 2022, 09:40:39 UTC
bcfe3ae Diego del Alamo04 February 2022, 09:39:17 UTCUpdate README.md04 February 2022, 09:39:17 UTC
48e96a5 Diego del Alamo04 February 2022, 09:38:25 UTCUpdate README.md04 February 2022, 09:38:25 UTC
a1642c8 Diego del Alamo04 February 2022, 09:36:51 UTCUpdating with changes to manuscript04 February 2022, 09:36:51 UTC
729e357 Diego del Alamo30 January 2022, 23:44:22 UTCBeautifying30 January 2022, 23:44:22 UTC
9d2268d Diego del Alamo13 January 2022, 07:22:14 UTCAdding equation for pLDDT-to-Bfactor conversion13 January 2022, 07:22:14 UTC
992f37f Diego del Alamo11 January 2022, 11:42:04 UTCReturning result11 January 2022, 11:42:04 UTC
b3f9a3c Diego del Alamo11 January 2022, 11:35:39 UTCSecond typo11 January 2022, 11:35:39 UTC
339cf88 Diego del Alamo11 January 2022, 11:32:00 UTCFixing typo11 January 2022, 11:32:00 UTC
9c2a946 Diego del Alamo11 January 2022, 11:27:43 UTCAdding output for predict()11 January 2022, 11:27:43 UTC
e2e4fe6 Diego del Alamo21 December 2021, 08:44:03 UTCDiscussion on MSA mutation added to README21 December 2021, 08:44:03 UTC
b20dd06 Diego del Alamo17 December 2021, 10:39:17 UTCUpdate mutate_msa.ipynb17 December 2021, 10:39:17 UTC
704bfac Diego del Alamo17 December 2021, 10:37:45 UTCAdding "mutate_msa" notebook and making slight modifications to other notebooks.17 December 2021, 10:37:45 UTC
f55116d Diego del Alamo15 December 2021, 06:05:44 UTCAdding citation and updating README15 December 2021, 06:05:44 UTC
7a2e280 Diego del Alamo11 December 2021, 10:29:23 UTCUpdate predict.py11 December 2021, 10:29:23 UTC
9009682 Diego del Alamo03 December 2021, 17:57:53 UTCUpdate util.py03 December 2021, 17:57:53 UTC
6d80959 Diego del Alamo03 December 2021, 15:47:24 UTCAdding function to introduce MSA-wide mutations (for alanine mutagenesis)03 December 2021, 15:47:24 UTC
2fa1d4b Diego del Alamo01 December 2021, 13:13:42 UTCUpdate README.md01 December 2021, 13:13:42 UTC
745d9e5 Diego del Alamo01 December 2021, 13:09:02 UTCMerge branch 'main' of https://github.com/delalamo/af2_conformations into main01 December 2021, 13:09:02 UTC
57aa4d5 Diego del Alamo01 December 2021, 13:08:27 UTCUpdating to use the refactored code in AlphaFold v2.1.101 December 2021, 13:08:27 UTC
9cbe3cb Diego del Alamo01 December 2021, 07:25:36 UTCUpdate README.md01 December 2021, 07:25:36 UTC
34a9021 Diego del Alamo30 November 2021, 09:01:17 UTCUpdate README.md30 November 2021, 09:01:17 UTC
6dc1a57 Diego del Alamo30 November 2021, 08:56:56 UTCUpdate README.md30 November 2021, 08:56:56 UTC
4a01500 Diego del Alamo25 November 2021, 21:55:42 UTCMerge pull request #1 from davidesala/analyses Analyses25 November 2021, 21:55:42 UTC
e8a9fdd Davide Sala25 November 2021, 14:51:39 UTCscripts for analyses added and readme updated25 November 2021, 14:51:39 UTC
0ce3266 Davide Sala25 November 2021, 14:46:21 UTCscripts for analyses added25 November 2021, 14:46:21 UTC
2127819 Diego del Alamo23 November 2021, 14:01:32 UTCUpdate README.md23 November 2021, 14:01:32 UTC
c2f859c Diego del Alamo23 November 2021, 05:32:48 UTCUpdate mmseqs2.py23 November 2021, 05:32:48 UTC
3e5c100 Diego del Alamo23 November 2021, 05:28:49 UTCUpdate README.md23 November 2021, 05:28:49 UTC
fd9cbe7 Diego del Alamo22 November 2021, 16:29:53 UTCUpdating link on colab badge22 November 2021, 16:29:53 UTC
e21e0e0 Diego del Alamo22 November 2021, 16:27:35 UTCUpdating notebook (trying again)22 November 2021, 16:27:35 UTC
17a1b97 Diego del Alamo22 November 2021, 16:11:39 UTCFixing typos in README22 November 2021, 16:11:39 UTC
0fd5e0e Diego del Alamo22 November 2021, 15:53:18 UTCUpdate README.md22 November 2021, 15:53:18 UTC
967dd14 Diego del Alamo22 November 2021, 15:33:03 UTCModifying README to use header22 November 2021, 15:33:03 UTC
9e247c3 Diego del Alamo22 November 2021, 15:31:52 UTCAdding header image22 November 2021, 15:31:52 UTC
0f19690 Diego del Alamo22 November 2021, 15:10:34 UTCInitial commit without notebook. Verifying that scripts work before committing notebook.22 November 2021, 15:10:34 UTC
1219656 Diego del Alamo22 November 2021, 15:03:04 UTCInitial commit22 November 2021, 15:03:04 UTC
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