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swh:1:snp:0c004a03453a29b80f921a24433f7e780b9ceb53

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Revision Author Date Message Commit Date
1ddbe2f slack notification 17 December 2018, 21:32:23 UTC
a350ecc Update JS 17 December 2018, 13:50:33 UTC
2012206 Empty annotationDB fix 17 December 2018, 13:18:07 UTC
7ddfa69 Fix the build 13 December 2018, 19:16:42 UTC
8b8b902 Update JS 13 December 2018, 19:09:43 UTC
b7a3bed Implemented custom annotation colors in GSEA plot 13 December 2018, 19:08:55 UTC
07fcf18 Update JS 12 December 2018, 16:29:12 UTC
ce70b37 GSEA plot external pallete 12 December 2018, 16:26:50 UTC
37378d7 Speed up annotationDB initialization 12 December 2018, 11:38:11 UTC
379c530 Update JS 07 December 2018, 15:05:41 UTC
7730b1c Update JS 05 December 2018, 15:44:20 UTC
8950225 User configurable fields for AnnotationDB 04 December 2018, 22:01:34 UTC
c443417 Fix annotationDB meta function 03 December 2018, 09:59:39 UTC
518aabb Added AnnotationDbi as dependency 03 December 2018, 09:47:20 UTC
25d9de2 Merge branch 'develop' of http://github.com/ctlab/phantasus into develop 30 November 2018, 17:01:24 UTC
44f2cb4 AnnotationDB convert implemented 30 November 2018, 17:00:34 UTC
d07edd2 keeping experimentData in loadFromARCHS4 28 November 2018, 20:08:07 UTC
3097c1f Fix the build 28 November 2018, 16:36:57 UTC
1d492c3 Revert 28 November 2018, 14:45:01 UTC
06f4957 temporary test fix 28 November 2018, 14:18:52 UTC
099f13f Master GEOquery in image 28 November 2018, 13:39:12 UTC
705aa7e Fixed TYPO in dockerfile 23 November 2018, 10:55:53 UTC
ac12afc Try to install latest geoquery via git clone 21 November 2018, 15:58:49 UTC
5bbd9c8 Docker build context change 21 November 2018, 15:17:55 UTC
e299964 Added my geoquery to dockerfile 19 November 2018, 09:44:11 UTC
8206d1f Update JS 19 November 2018, 09:41:48 UTC
17c1510 Expirement data implemented in GDS, createES 16 November 2018, 16:02:26 UTC
0bf5fb6 Added gfortran explicitly 16 November 2018, 16:01:36 UTC
712f7ab Pass experimentData to frontend 15 November 2018, 16:45:14 UTC
04cf519 Optimize GDS parsing 15 November 2018, 16:44:53 UTC
b382c3d Update JS. Fixed bug on landing page. Implemented dataset history 09 November 2018, 14:20:59 UTC
98d6a5c Cache fixes 07 November 2018, 15:15:21 UTC
71c920c Structured caching GEO WIP. GDS done 07 November 2018, 12:24:52 UTC
5f17f6d Structured caching GEO WIP. GSE done 02 November 2018, 15:13:39 UTC
c591490 ARCHS4 downloader in R 31 October 2018, 12:52:48 UTC
b2cf762 ARCHS4 is now subfolder in cache 31 October 2018, 07:20:02 UTC
258dd48 ARCHS4 fixed NA in genes 31 October 2018, 07:20:02 UTC
fc6d350 Added docker-compose. ARCHS4 in readme 31 October 2018, 07:20:02 UTC
c1069ff bump x.y.z versions to odd y after creation of RELEASE_3_8 branch 30 October 2018, 15:54:39 UTC
a372342 bump x.y.z versions to even y prior to creation of RELEASE_3_8 branch 30 October 2018, 15:42:08 UTC
cf8e555 Updated tutorial 29 October 2018, 14:31:24 UTC
5b8431b 1.1.6 29 October 2018, 13:01:51 UTC
1c57067 Travis fortran workaround 26 October 2018, 11:35:45 UTC
5532378 Adjust tool picture fixed 26 October 2018, 11:35:45 UTC
8ecdb00 Update JS 26 October 2018, 11:35:45 UTC
b70196b Fix log in adjust 26 October 2018, 11:35:45 UTC
c294c2e R 3.5 in docker 26 October 2018, 11:35:45 UTC
b0922d4 version bump to 1.1.5 20 October 2018, 13:07:32 UTC
0d6a5c0 Updated readme 20 October 2018, 13:07:06 UTC
85f9f43 Merge branch 'master' of git.bioconductor.org:packages/phantasus 20 October 2018, 13:01:07 UTC
3c7eb69 Merge pull request #94 from ctlab/develop Develop 20 October 2018, 12:05:57 UTC
3b6d9b9 BiocCheck fixes 19 October 2018, 10:45:50 UTC
202dece Update roxygen annotation 18 October 2018, 12:08:32 UTC
8afaec8 Update JS. Merged PCA Plot latest fixes 18 October 2018, 11:54:31 UTC
0dc61da Some cleanup 17 October 2018, 01:39:30 UTC
6f409af Update JS 17 October 2018, 01:38:00 UTC
4f02356 Merge pull request #93 from ctlab/appveyor Windows fix. 16 October 2018, 14:18:36 UTC
f96cbfa Appveyor test 16 October 2018, 13:45:33 UTC
4b9f83e 1.1.4 RC2 10 October 2018, 15:01:33 UTC
af9d405 Update JS. Fix probe, fix filters 10 October 2018, 11:18:25 UTC
2650f63 Update JS. Test fix 06 October 2018, 13:03:58 UTC
01a9bfc RC2. GSEA Plot fixes. Race state fixed. PCA Plot revamped 05 October 2018, 14:52:58 UTC
767cc8d One ES -> One Session -> One happy frontend 05 October 2018, 11:58:55 UTC
27213a8 id column is preserved in GDS datasets 04 October 2018, 16:43:35 UTC
82b5765 Merge pull request #91 from ctlab/develop RC 1.1.4 28 September 2018, 17:30:36 UTC
cd933d1 RC 28 September 2018, 17:27:32 UTC
32ea536 Update JS. PCA plot sort-stable fix 23 September 2018, 12:26:24 UTC
05cb2ad Update JS. Annotation dataset improvement 17 September 2018, 14:55:56 UTC
7679418 Collapse dataset fixes 17 September 2018, 13:27:22 UTC
be43626 Collapse dataset working candidate 17 September 2018, 11:13:29 UTC
deac377 CR collapseDataset 13 September 2018, 02:51:47 UTC
94e82b8 Removed junk 12 September 2018, 12:45:32 UTC
1993293 collapseDataset + tests implemented 12 September 2018, 12:39:01 UTC
f7a87c5 fixes read.gct missing last row/column annotations 11 September 2018, 15:30:01 UTC
1366c31 Merge branch 'develop' of github.com:ctlab/phantasus into develop 11 September 2018, 14:58:16 UTC
e93cb86 Adding quiet option for servePhantasus 11 September 2018, 14:57:51 UTC
cc1ee9d Collapse candidate 11 September 2018, 14:02:51 UTC
f0693d9 Update JS. New tutorial 10 September 2018, 12:24:36 UTC
27fbda8 Update tutorial 08 September 2018, 23:34:46 UTC
06931f9 Update JS. TCGA datasets 06 September 2018, 23:33:28 UTC
7c63c4e additional updates from BiocInstaller to BiocManager 06 September 2018, 15:52:28 UTC
db005e4 Update JS 06 September 2018, 09:14:16 UTC
2c001b6 UpdateJS. Rename column 03 September 2018, 14:04:01 UTC
a3a0c44 Rename column implemented 03 September 2018, 14:03:29 UTC
4f0e68f Update JS 03 September 2018, 10:39:01 UTC
211f569 Annotation name implemented 03 September 2018, 10:38:19 UTC
c4ae3a7 Update JS 02 September 2018, 21:10:00 UTC
d79b9ae Implemented onePlusLog2 operation in adjustDataset 02 September 2018, 21:08:51 UTC
7ccb9f0 Update JS. Adjust mirroring disabled in datasets without session 31 August 2018, 01:43:13 UTC
93dc3bd Update JS. Adjust mirroring final 31 August 2018, 01:30:28 UTC
95ed673 Fixed and added test 30 August 2018, 23:03:32 UTC
b908239 Filter pData fix. Vector length conflict 30 August 2018, 06:18:50 UTC
9277ad4 Update JS. Adjust mirroring implemented 30 August 2018, 06:06:25 UTC
253a622 Adjust mirroring fix. Logarithm on negatives 30 August 2018, 06:04:26 UTC
26733f8 Fix phenoData filter 30 August 2018, 03:44:23 UTC
2172598 Adjust mirring 29 August 2018, 02:19:37 UTC
374e842 Update JS. Fix PhantomJS testing 21 August 2018, 13:45:55 UTC
f85260d Update JS. Fix PhantomJS test 21 August 2018, 13:15:52 UTC
540453c Merge branch 'develop' of https://github.com/ctlab/phantasus into develop 20 August 2018, 16:02:19 UTC
6f27642 New probe. New debug mode 20 August 2018, 15:59:48 UTC
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