swh:1:snp:0da231f3ffdb3226650880f1b61d5d5cdcbd749b
Tip revision: c23845d26f7b1b3fd038e661f8d144ea1d4c81e0 authored by satijalab on 07 September 2020, 16:55:08 UTC
Merge pull request #3479 from satijalab/develop
Merge pull request #3479 from satijalab/develop
Tip revision: c23845d
appveyor.yml
# DO NOT CHANGE the "init" and "install" sections below
# Download script file from GitHub
init:
ps: |
$ErrorActionPreference = "Stop"
Invoke-WebRequest http://raw.github.com/krlmlr/r-appveyor/master/scripts/appveyor-tool.ps1 -OutFile "..\appveyor-tool.ps1"
Import-Module '..\appveyor-tool.ps1'
install:
- "%PYTHON%\\python.exe -m pip install wheel"
- "%PYTHON%\\python.exe -m pip install phate"
- ps: Bootstrap
# Adapt as necessary starting from here
environment:
global:
R_ARCH: x64
USE_RTOOLS: true
BIOC_USE_DEVEL: "FALSE"
_R_CHECK_FORCE_SUGGESTS_: false
PYTHON: "C:\\Python36-x64"
RETICULATE_PYTHON: "C:\\Python36-x64"
CRAN: "https://cloud.r-project.org"
build_script:
- travis-tool.sh install_deps
- travis-tool.sh r_binary_install curl
- travis-tool.sh bioc_install GenomeInfoDbData
- travis-tool.sh bioc_install DESeq2
- travis-tool.sh bioc_install MAST
- travis-tool.sh bioc_install S4Vectors
- travis-tool.sh bioc_install SummarizedExperiment
- travis-tool.sh bioc_install SingleCellExperiment
test_script:
- travis-tool.sh run_tests
on_failure:
- 7z a failure.zip *.Rcheck\*
- appveyor PushArtifact failure.zip
artifacts:
- path: '*.Rcheck\**\*.log'
name: Logs
- path: '*.Rcheck\**\*.out'
name: Logs
- path: '*.Rcheck\**\*.fail'
name: Logs
- path: '*.Rcheck\**\*.Rout'
name: Logs
- path: '\*_*.tar.gz'
name: Bits
- path: '\*_*.zip'
name: Bits