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https://github.com/fenderglass/Ragout
05 April 2024, 18:02:13 UTC
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4011904 fenderglass08 August 2014, 06:20:32 UTCversion 1.008 August 2014, 06:20:32 UTC
5783aa3 fenderglass07 August 2014, 19:31:39 UTCminor logging improvement07 August 2014, 19:31:39 UTC
4c47ee5 fenderglass07 August 2014, 19:06:52 UTCrefine by default, additinal testing for native modules07 August 2014, 19:06:52 UTC
8cdb83e fenderglass07 August 2014, 09:29:42 UTCrefinement added to tests07 August 2014, 09:29:42 UTC
c09edca fenderglass07 August 2014, 09:06:56 UTCchanged rows order in links file, debug output improved07 August 2014, 09:06:56 UTC
e0a19b4 fenderglass06 August 2014, 18:23:39 UTCsmall improvement in refinement06 August 2014, 18:23:39 UTC
5cfb484 fenderglass30 July 2014, 18:23:05 UTCfaster cut vertex algorithm, fixed bug with debug30 July 2014, 18:23:05 UTC
f7a3a1f fenderglass22 July 2014, 17:04:18 UTCmore pretty links, ord removed22 July 2014, 17:04:18 UTC
340a0ea fenderglass21 July 2014, 15:32:55 UTClinks output format slightly changed21 July 2014, 15:32:55 UTC
2b0ae81 fenderglass21 July 2014, 14:45:33 UTCMerge branch 'lanna' of github.com:fenderglass/Ragout into devel21 July 2014, 14:45:33 UTC
94082c3 fenderglass21 July 2014, 12:53:51 UTCexample typo21 July 2014, 12:53:51 UTC
b924b79 Anna Lioznova21 July 2014, 12:49:40 UTCOutput links added21 July 2014, 12:49:40 UTC
7b354df fenderglass21 July 2014, 12:39:25 UTCsmall fix21 July 2014, 12:39:25 UTC
6c6048b fenderglass21 July 2014, 12:03:03 UTCImproved manual21 July 2014, 12:03:03 UTC
e59caf7 fenderglass21 July 2014, 09:46:41 UTCMerge branch 'master' into devel21 July 2014, 09:46:41 UTC
480a94c fenderglass18 July 2014, 18:59:24 UTCadded colored graph18 July 2014, 18:59:24 UTC
5bc5199 fenderglass18 July 2014, 18:35:36 UTCremoving red edges after scoring18 July 2014, 18:35:36 UTC
d01e7c7 fenderglass17 July 2014, 19:32:40 UTCanother one17 July 2014, 19:32:40 UTC
f612984 fenderglass17 July 2014, 19:28:00 UTCsmall manual fix17 July 2014, 19:28:00 UTC
65ade75 fenderglass08 July 2014, 10:52:02 UTCMerge branch 'master' into devel08 July 2014, 10:52:02 UTC
943c9e6 fenderglass08 July 2014, 10:50:54 UTCfixed example08 July 2014, 10:50:54 UTC
1ab7d18 fenderglass05 July 2014, 10:40:47 UTCMerge branch 'devel'05 July 2014, 10:40:47 UTC
0994508 fenderglass22 June 2014, 00:29:06 UTCmakefile fix for mac22 June 2014, 00:29:06 UTC
1c81dd6 fenderglass05 July 2014, 10:06:59 UTCoups05 July 2014, 10:06:59 UTC
9da47eb fenderglass05 July 2014, 10:05:09 UTCdownload link update, nopostprocess option for sibelia05 July 2014, 10:05:09 UTC
a9383f3 fenderglass04 July 2014, 13:20:09 UTCminor fixes04 July 2014, 13:20:09 UTC
e50e896 fenderglass03 July 2014, 13:39:35 UTCuseful warnings + extra overlap parameter03 July 2014, 13:39:35 UTC
10d36fd fenderglass03 July 2014, 09:48:05 UTCmaf2synteny parameters03 July 2014, 09:48:05 UTC
d05e366 fenderglass02 July 2014, 15:43:41 UTCadded more parameters to config, new format02 July 2014, 15:43:41 UTC
f7b221e fenderglass02 July 2014, 15:08:32 UTCminor makefile change02 July 2014, 15:08:32 UTC
0453aa0 fenderglass01 July 2014, 13:28:35 UTCforgot to add Sibelia01 July 2014, 13:28:35 UTC
6453081 fenderglass01 July 2014, 13:25:51 UTCautomatic testing01 July 2014, 13:25:51 UTC
5f41439 fenderglass29 June 2014, 20:36:07 UTCbuild status29 June 2014, 20:36:07 UTC
08bc1c1 fenderglass29 June 2014, 20:27:02 UTCmore correct makefile29 June 2014, 20:27:02 UTC
bbdf484 fenderglass29 June 2014, 20:05:03 UTCminor makefile fix29 June 2014, 20:05:03 UTC
6baf07d fenderglass29 June 2014, 19:58:43 UTCtabs -> spaces29 June 2014, 19:58:43 UTC
41d592f fenderglass29 June 2014, 19:50:25 UTCtravis29 June 2014, 19:50:25 UTC
d3bc49a fenderglass22 June 2014, 15:21:31 UTCfixed debug directory creation22 June 2014, 15:21:31 UTC
848cefa fenderglass22 June 2014, 11:18:27 UTCmammals notice22 June 2014, 11:18:27 UTC
b0c4871 fenderglass22 June 2014, 10:58:46 UTCoups22 June 2014, 10:58:46 UTC
ac052d0 fenderglass22 June 2014, 10:55:55 UTCsmall fix22 June 2014, 10:55:55 UTC
bf19ec7 fenderglass22 June 2014, 10:54:10 UTCassemblers mentioned22 June 2014, 10:54:10 UTC
00a9cf3 fenderglass22 June 2014, 10:41:11 UTCsite name22 June 2014, 10:41:11 UTC
2265950 fenderglass22 June 2014, 10:39:31 UTCversion up22 June 2014, 10:39:31 UTC
2e27c91 fenderglass22 June 2014, 10:37:19 UTCcopyright notice + some comments22 June 2014, 10:37:19 UTC
80c7799 fenderglass22 June 2014, 09:40:57 UTCsome refactoring and improvements22 June 2014, 09:40:57 UTC
50b4b83 fenderglass22 June 2014, 00:22:38 UTCMerge branch 'master' of https://github.com/fenderglass/Ragout22 June 2014, 00:22:38 UTC
4407bc8 fenderglass22 June 2014, 00:20:15 UTCmacos fix22 June 2014, 00:20:15 UTC
55078f9 fenderglass21 June 2014, 23:17:28 UTCminor21 June 2014, 23:17:28 UTC
93f1995 fenderglass21 June 2014, 22:51:04 UTCC++0x21 June 2014, 22:51:04 UTC
e26a6e8 fenderglass21 June 2014, 22:47:47 UTCMakefiles21 June 2014, 22:47:47 UTC
0520321 fenderglass21 June 2014, 21:59:27 UTCminor changes, unneeded scripts removed21 June 2014, 21:59:27 UTC
8da35dc fenderglass21 June 2014, 09:20:51 UTCoups21 June 2014, 09:20:51 UTC
66fe2be fenderglass21 June 2014, 09:17:16 UTCnewick parser21 June 2014, 09:17:16 UTC
7059a3e fenderglass21 June 2014, 09:11:58 UTCinstallation script fix21 June 2014, 09:11:58 UTC
9dbde54 fenderglass20 June 2014, 20:38:22 UTCusage improved20 June 2014, 20:38:22 UTC
ff7fe5d fenderglass20 June 2014, 20:34:41 UTCanother one20 June 2014, 20:34:41 UTC
96d75db fenderglass20 June 2014, 20:32:52 UTCsmall fix20 June 2014, 20:32:52 UTC
5a278a3 fenderglass20 June 2014, 20:27:38 UTCinstallation script fix20 June 2014, 20:27:38 UTC
4a8415c fenderglass20 June 2014, 17:16:35 UTCdriver script changed a bt20 June 2014, 17:16:35 UTC
debf51a fenderglass20 June 2014, 17:06:07 UTCminor20 June 2014, 17:06:07 UTC
f82c6c7 fenderglass20 June 2014, 16:23:54 UTCfasta i/o without biopython20 June 2014, 16:23:54 UTC
3cdebcc fenderglass20 June 2014, 14:15:06 UTCback to simple distribution, networkx incorporated20 June 2014, 14:15:06 UTC
12f0675 fenderglass19 June 2014, 09:16:47 UTCminor things19 June 2014, 09:16:47 UTC
021ea16 fenderglass19 June 2014, 08:26:01 UTCno more static linking19 June 2014, 08:26:01 UTC
a4451b2 fenderglass18 June 2014, 20:22:46 UTCdistance estimation with overlap graph18 June 2014, 20:22:46 UTC
9671514 fenderglass18 June 2014, 14:53:29 UTCdistance estimation18 June 2014, 14:53:29 UTC
0399e58 fenderglass17 June 2014, 21:43:47 UTC-pypi17 June 2014, 21:43:47 UTC
b5f43a4 fenderglass17 June 2014, 21:43:24 UTCinstall docs17 June 2014, 21:43:24 UTC
8b18060 fenderglass17 June 2014, 21:30:58 UTCchanged exec name17 June 2014, 21:30:58 UTC
3e09bf4 fenderglass16 June 2014, 16:51:17 UTCsmall fixes16 June 2014, 16:51:17 UTC
de4c0c0 fenderglass02 June 2014, 13:36:38 UTCscripts renamed02 June 2014, 13:36:38 UTC
b7d76f8 fenderglass02 June 2014, 13:22:44 UTCsynteny blocks with coordinates02 June 2014, 13:22:44 UTC
b65f81b fenderglass31 May 2014, 17:46:03 UTCminor usage fix31 May 2014, 17:46:03 UTC
9eada68 fenderglass31 May 2014, 17:36:04 UTCfew fixes31 May 2014, 17:36:04 UTC
4b163c5 fenderglass30 May 2014, 21:47:05 UTCfixed ecoli recipe30 May 2014, 21:47:05 UTC
ef9d49d fenderglass28 May 2014, 20:40:13 UTCsite name28 May 2014, 20:40:13 UTC
1fec816 fenderglass28 May 2014, 12:38:26 UTCdocumentation updated28 May 2014, 12:38:26 UTC
821cb4e fenderglass28 May 2014, 10:30:37 UTCfix for str -> bool casting28 May 2014, 10:30:37 UTC
c1cf33b fenderglass27 May 2014, 17:30:11 UTCnew recipe format27 May 2014, 17:30:11 UTC
e0e85ea fenderglass27 May 2014, 15:42:46 UTCsmall fixes in debug report27 May 2014, 15:42:46 UTC
eab6cb6 fenderglass26 May 2014, 10:00:20 UTClicense added, small fixes26 May 2014, 10:00:20 UTC
2c286df fenderglass25 May 2014, 09:01:35 UTCupdated cholerae alignment25 May 2014, 09:01:35 UTC
098e67b fenderglass24 May 2014, 20:34:15 UTCfixed bug with chr names containing dots24 May 2014, 20:34:15 UTC
81c4077 fenderglass24 May 2014, 10:51:06 UTCMerge branch 'devel' of github.com:fenderglass/Ragout into devel24 May 2014, 10:51:06 UTC
0db0909 fenderglass24 May 2014, 10:49:41 UTCfixed debug statistics24 May 2014, 10:49:41 UTC
8910a6f AvdeevPavel23 May 2014, 21:27:25 UTCMy fix debug report and add my_has_path function. Maybe modificate to return len path.23 May 2014, 21:27:25 UTC
c7cf686 fenderglass23 May 2014, 20:36:19 UTCinfinity edges to correctly ork with chromosome ends23 May 2014, 20:36:19 UTC
366f95a fenderglass21 May 2014, 08:12:16 UTCscripts updated21 May 2014, 08:12:16 UTC
dc47ed0 AvdeevPavel20 May 2014, 20:03:51 UTCAdd inversion scrypt20 May 2014, 20:03:51 UTC
46ac790 fenderglass19 May 2014, 22:46:54 UTCmanuals updated19 May 2014, 22:46:54 UTC
59592d4 fenderglass19 May 2014, 14:08:17 UTCREFS removed from config19 May 2014, 14:08:17 UTC
0805c25 fenderglass19 May 2014, 11:57:22 UTConly maximum overlaps19 May 2014, 11:57:22 UTC
8e21fdb fenderglass17 May 2014, 22:12:25 UTCoups17 May 2014, 22:12:25 UTC
0201cd2 fenderglass17 May 2014, 22:03:12 UTCfaster merging17 May 2014, 22:03:12 UTC
a0406aa fenderglass17 May 2014, 21:25:32 UTCMerge with pavel_devel17 May 2014, 21:25:32 UTC
682e0c3 fenderglass17 May 2014, 21:13:36 UTCexamples updated17 May 2014, 21:13:36 UTC
87591fa fenderglass17 May 2014, 15:24:23 UTCmaf synteny backend17 May 2014, 15:24:23 UTC
130f0e6 fenderglass17 May 2014, 13:41:10 UTCDima's FM-index incorporated17 May 2014, 13:41:10 UTC
4d6ff67 AvdeevPavel16 May 2014, 20:15:26 UTCAdd my_all_simple_path function16 May 2014, 20:15:26 UTC
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