swh:1:snp:2c68a6c5a8af2f06ac2c0225927f25b54fd1f9d0
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Tip revision: 2565fc870cd7f0a64d857ff89e682dc9344dc7c1 authored by Dominique Makowski on 12 February 2020, 04:10:16 UTC
version 0.5.2
Tip revision: 2565fc8
test-hdi.R
if (requireNamespace("rstanarm", quietly = TRUE)) {
  context("hdi")

  test_that("hdi", {
    testthat::expect_equal(hdi(distribution_normal(1000), ci = .90)$CI_low[1], -1.64, tolerance = 0.02)
    testthat::expect_equal(nrow(hdi(distribution_normal(1000), ci = c(.80, .90, .95))), 3, tolerance = 0.01)
    testthat::expect_equal(hdi(distribution_normal(1000), ci = 1)$CI_low[1], -3.09, tolerance = 0.02)
    testthat::expect_equal(length(capture.output(print(hdi(distribution_normal(1000))))), 6)
    testthat::expect_equal(length(capture.output(print(hdi(distribution_normal(1000), ci = c(.80, .90))))), 12)


    testthat::expect_warning(hdi(c(2, 3, NA)))
    testthat::expect_warning(hdi(c(2, 3)))
    testthat::expect_warning(hdi(distribution_normal(1000), ci = 0.0000001))
    testthat::expect_warning(hdi(distribution_normal(1000), ci = 950))
    testthat::expect_warning(hdi(c(distribution_normal(1000, 0, 1), distribution_normal(1000, 6, 1), distribution_normal(1000, 12, 1)), ci = .10))
  })



  if (require("insight")) {
    m <- insight::download_model("stanreg_merMod_5")
    p <- insight::get_parameters(m, effects = "all")

    test_that("ci", {
      testthat::expect_equal(
        hdi(m, ci = c(.5, .8), effects = "all")$CI_low,
        hdi(p, ci = c(.5, .8))$CI_low,
        tolerance = 1e-3
      )
    })

    m <- insight::download_model("brms_zi_3")
    p <- insight::get_parameters(m, effects = "all", component = "all")

    test_that("rope", {
      testthat::expect_equal(
        hdi(m, ci = c(.5, .8), effects = "all", component = "all")$CI_low,
        hdi(p, ci = c(.5, .8))$CI_low,
        tolerance = 1e-3
      )
    })
  }
}
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