swh:1:snp:2c68a6c5a8af2f06ac2c0225927f25b54fd1f9d0
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Tip revision: 2565fc870cd7f0a64d857ff89e682dc9344dc7c1 authored by Dominique Makowski on 12 February 2020, 04:10:16 UTC
version 0.5.2
Tip revision: 2565fc8
test-si.R
if (requireNamespace("rstanarm", quietly = TRUE)) {
  context("si")

  test_that("si.numeric", {
    set.seed(333)
    prior <- distribution_normal(1000, mean = 0, sd = 1)
    posterior <- distribution_normal(1000, mean = .5, sd = .3)

    res <- si(posterior, prior)
    testthat::expect_equal(res$CI_low, 0.039, tolerance = 0.02)
    testthat::expect_equal(res$CI_high, 1.053, tolerance = 0.02)
    testthat::expect_is(res,c("bayestestR_si"))

    res <- si(posterior, prior, BF = 3)
    testthat::expect_equal(res$CI_low, 0.333, tolerance = 0.02)
    testthat::expect_equal(res$CI_high, 0.759, tolerance = 0.02)

    res <- si(posterior, prior, BF = 100)
    testthat::expect_true(all(is.na(res$CI_low)))
    testthat::expect_true(all(is.na(res$CI_high)))
  })

  test_that("si.rstanarm", {
    testthat::skip_on_cran()
    testthat::skip_on_travis()

    set.seed(333)
    library(rstanarm)
    contrasts(sleep$group) <- contr.bayes # see vingette
    stan_model <- stan_lmer(extra ~ group + (1 | ID), data = sleep, refresh = 0)

    res <- si(stan_model, verbose = FALSE)
    testthat::expect_equal(res$CI_low, c(-0.057, 0.417), tolerance = 0.02)
    testthat::expect_equal(res$CI_high, c(3.086,1.819), tolerance = 0.02)
    testthat::expect_is(res,c("bayestestR_si"))
  })
}
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