swh:1:snp:3a699297f000109a1bc833f294a54171df990207

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Revision Author Date Message Commit Date
08961cb Fix issue where injection is longer than filter length (#2302) 28 August 2018, 13:16:11 UTC
bfba5c5 pycbc_optimal_snr: be more explicit on waveform failures (#2301) Looks good. Thanks Tito. 27 August 2018, 17:31:26 UTC
ce9c657 simplify setup.py a bit more (#2298) * setup.py cleanup * test 27 August 2018, 13:34:35 UTC
aa52688 Status JSON should only be updated by root process (#2300) 26 August 2018, 14:28:52 UTC
811df05 Disable check for grid proxy in pycbc_submit_dax (#2297) * fixes https://github.com/gwastro/pycbc/issues/2289 * reenable workflow submission test * correct syntax for pegasus-plan option * quote the NO_GRID string 25 August 2018, 18:02:15 UTC
405d977 Update JSON status from within pycbc_live (#2299) * Update JSON status from within pycbc_live * Remove unused variable * Update JSON contact 25 August 2018, 17:47:30 UTC
16ef9c3 PyCBC Live: fix SNR series error for triggers straggling the chunk boundary (#2253) * PyCBC Live: fix SNR series error for triggers straggling the chunk boundary * Next time we will start with slightly more info * Remove duplication of psds, better docstring, indentation * PSDs no longer needed here * Climate… * Fix time shift and try to reduce cyclomatic complexity * Fix a problem with XML PSDs being unreadable by lal.series (thanks Soichiro and Kipp) 24 August 2018, 22:46:02 UTC
7decd7f resize fix for pycbc live, some additional debug options (#2296) * add function to set fftw plan time limit * climate * pycbc live fixes * fixes * Update pycbc_live 24 August 2018, 22:45:39 UTC
0518cb8 Avoid MemoryErrors in SingleDetTriggers (#2295) When reading, filtering and clustering merged single-detector triggers using SingleDetTriggers, I noticed very large memory usages which occasionally lead to MemoryErrors, even on machines with several tens of gigabytes of memory. This change appears to eliminate the error, although I have not made precise measurements of before/after memory usage. It also simplifies the code a bit and possibly makes it slightly faster. 24 August 2018, 22:32:47 UTC
7104913 use snr column for network snr (#2283) 24 August 2018, 19:13:15 UTC
8a177b0 add function to set fftw plan time limit (#2292) * add function to set fftw plan time limit * climate 24 August 2018, 18:39:22 UTC
1601e8b Update credit.rst 24 August 2018, 11:43:15 UTC
103e15f Fix Travis workflow test (#2290) * fixes https://github.com/gwastro/pycbc/issues/2289 * add option to enable used of nogrid in https://github.com/pegasus-isi/pegasus/blob/master/src/edu/isi/pegasus/planner/client/CPlanner.java * add no-grid option to fix https://github.com/gwastro/pycbc/issues/2289 * add if not present option for segments * pass nogrid with --forward option see https://github.com/pegasus-isi/pegasus/blob/4.8/src/edu/isi/pegasus/planner/client/CPlanner.java#L1211 * commenting out call to pegasus-plan 24 August 2018, 11:41:51 UTC
0efb36f Update the citations requirements for PyCBC (#2293) * revised citations * use anonymous hyperlink references with double underscores https://stackoverflow.com/questions/5464627/how-to-have-same-text-in-two-links-with-restructured-text/14067756#14067756 * missed an underscore 23 August 2018, 19:47:42 UTC
60280d1 Make ensurearray more numpy like (#2291) * use numpy broadcast_arrays in ensurearray * update spin distribution * fix whitespace 23 August 2018, 17:29:28 UTC
2cfe460 Remove return_base_10, this can be done via log10(param) rather than this function. (#2288) 23 August 2018, 14:39:34 UTC
669ee6b move injection data files to albert (#2243) * move injection data files to albert * Travis CI: updated download URLs for injection files 23 August 2018, 14:10:54 UTC
a5b53ce Correct SPA waveform for nonlinear tides from pg modes (#2284) * resolved merge conflict * correct spa waveform for nl tides from pg modes * remove unused argument f0 * remove whitespace * code climate issues * fixed docstrings * fixed typo in merge 22 August 2018, 15:19:36 UTC
14c7d2c Updated install.rst (#2286) https://github.com/gwastro/pycbc/pull/2259/commits/c421b023e9449db8efebf35d3549f41c743bf6b0 accidentally removed a "pip install" from the installation instructions. 22 August 2018, 13:38:19 UTC
21bf6b1 add a helper function for log histograms (#2285) 22 August 2018, 11:26:17 UTC
63ae017 remove debug print statement (#2282) * remove debug print statement * no need for name 20 August 2018, 21:15:23 UTC
d07c8f3 improve detector module (#2274) * antenna pattern fufnction * overhead update * convert light travel time to python * add python version of time delay from detector * earth center code * update text * update text * fixes * add unittest for detector.py and apply fixes * update docstrings * add detector docs * add detector example scripts * title * silence cython warnings * style fixes * more style stuff * be consistent on six * Delete project.py * add six to hidden imports * try this * typo * this too * here? * arghhh!!!! * typo * saga * climate * typo 20 August 2018, 14:28:37 UTC
27ce961 Use data from LOSC to check the workflow (#2280) * provide a segdb-like interface to losc * remove code that gets cookies and proxies * removed old debugging code * always run the workflow test script * use public datafind server, segments, and vdf 16 August 2018, 13:07:47 UTC
5f73b44 Update setup.py 16 August 2018, 10:15:26 UTC
bb133a4 print any messages to log 15 August 2018, 19:22:05 UTC
23847a6 Revert "update patch against ligo-proxy-utils-1.3.3-1.el7" This reverts commit f6c24e9628ef27607dff704df3bd1ae0d997ef6c. 15 August 2018, 19:20:23 UTC
f6c24e9 update patch against ligo-proxy-utils-1.3.3-1.el7 15 August 2018, 19:11:36 UTC
6e7ef6c set for 1.12.2 release (#2279) 15 August 2018, 17:53:05 UTC
94a494e simplify setup.py script (#2272) * simplify setup.py, add alias * no need to make user env file anymore, don't do it! * remove uneeded testing stuff * fixes * no unittest2 * another unittest2 mention * remove unused imports * minor changes * remove more cruft * combine package data finding with finding scripts * argparse isstandard in python 2.7, dropped support for 2.6 15 August 2018, 17:44:55 UTC
5f63aa0 add support for injection / distribution tests, start on p3 tmpltbank test (#2277) * start on tmpltbank test * climate * fixes * poke * fixes * make sure to use ints * fix example for python3 * another int conversion 15 August 2018, 15:43:01 UTC
3b6f5b3 Add low-frequency cutoff option for every detector (#2266) * Add low-frequency cutoof option for every detector * ws * Make f_lower a dict in test_inference * fix codacy issues * fix codeclimate issue 13 August 2018, 14:48:53 UTC
404fc18 fix performance regression in qtransform (#2275) 10 August 2018, 22:57:52 UTC
6183917 fixes to make test fftw unthreaded work in python3 (#2276) 10 August 2018, 22:54:59 UTC
3633324 fix inline bug (#2271) 02 August 2018, 07:24:18 UTC
13ac5ee Update companion.txt (#2270) request to add healpy. 01 August 2018, 13:46:33 UTC
cfe2ee1 Trivial change fixing dictionary key sorting in analytical.py (#2269) * Trivial change fixing dictionary key sorting in analytical.py * Commented line removed 31 July 2018, 14:10:13 UTC
c9ddd61 Declare read-only file as read-only (#2267) 29 July 2018, 16:28:29 UTC
5c56518 Some bug fixes (#2264) * Nearest_binary must be integer * Sanity checking in cutoff_indices * Thanks codacy * Silence Cognitive Complexity 24 July 2018, 13:22:32 UTC
4af3870 Make transforms a kwarg to custom constraints (#2263) * make transforms a kwarg to custom constraints * update read_constraints_from_config 24 July 2018, 08:43:25 UTC
ca0ea00 update pegasus version (#2259) * update pegasus version * simplify * upate * again * minor * test 21 July 2018, 02:17:49 UTC
dcd4378 add losc https urls as fallback (#2261) 20 July 2018, 22:11:41 UTC
c631fb2 set the LAL_DATA_PATH for the local site 20 July 2018, 21:33:29 UTC
32588b7 fix err message in workflow/core.py (#2260) 20 July 2018, 16:27:36 UTC
2698efc Append the lalsuite hash to the cache file (#2251) Cache lal builds based on hash, update lal hash, and add ligo-segments 19 July 2018, 19:56:49 UTC
90876de optimal_snr: add verbosity for debugging bad approximants (#2255) * optimal_snr: add verbosity for debugging bad approximants * Add option for showing a progress bar with tqdm 18 July 2018, 07:07:29 UTC
5b39734 require astropy < 3 (#2252) * Update setup.py * Update requirements.txt 18 July 2018, 01:52:07 UTC
4d43877 Update setup.py 17 July 2018, 02:31:04 UTC
3dbc81c Update setup.py 17 July 2018, 01:02:56 UTC
1643945 Update .travis.yml 17 July 2018, 01:01:52 UTC
0729ad8 Update setup.py 16 July 2018, 23:23:04 UTC
f3c1e7d allow pycbc to be installed in python3 (#2229) * allow pycbc to be installed in python3 * update * fix typo, use six for PY3 checking * ws 16 July 2018, 19:48:22 UTC
70d54c4 Add chi_p and chi_eff from spherical conversions (#2244) * add chi_p and chi_eff from spherical conversions * fix pep8 issue * fix typo in test * fix another typo in the test 16 July 2018, 19:01:16 UTC
936824b allow pycbc live to resolve only the latest frames (#2230) * allow pycbc live to resolve only the latest frames * cleanup 16 July 2018, 13:57:27 UTC
d18fafe directly use ligolwsegmentlist constructor (#2241) * directly use ligolwsegmentlist constructor * climate? * import error 12 July 2018, 17:06:01 UTC
d0066dd Don't open bank file for writing (#2242) 11 July 2018, 17:20:21 UTC
d48f8ac add chi_p to parameters (#2245) 11 July 2018, 16:30:39 UTC
18d350c allow sections to read parameters be set on command line (#2240) 11 July 2018, 12:47:46 UTC
ad08def Make section names for distributions keyword args (#2239) * make sections to read variable_args a keyword argument * update doc string * break read_args_from_config into two separate functions * update test * simplify complexity, fix line continuation 11 July 2018, 09:57:29 UTC
4c3b550 return default values if burn-in attrs haven't been written to file (#2237) 11 July 2018, 06:48:15 UTC
67d0fdc make sure variables to frame cache are strings (#2238) 11 July 2018, 06:24:46 UTC
e876fd1 try to get labels from waveform.parameters (#2236) 10 July 2018, 22:15:48 UTC
fe7aac3 Updates to n acl burn-in (#2174) * only use second half of chain for n_acl burn-in * change default to 25 * fix checking for burn in update * ignore previous burn in * add acl interval * scale the acl interval based on number of iterations * change default nacls to 5 * undo skip burn in * change acl interval scaling 10 July 2018, 20:15:55 UTC
ad51cf7 Allow conversions to be used in PP dax (#2168) * read parameters for pp plots from ini file * move plot args back to inference section * allow for functions to be used in plot inj recovery * write files to output directory * move chdir so can load cp files * sanitize plot names * fix inference file path * properly parse parameters arguments * fix typo * don't remake run directory 10 July 2018, 17:49:09 UTC
74ba276 Tell PyCBC that LOSC frames are available on the OSG (#2235) * only the regular ligo frames are at UNL and CIT * LOSC frames are on the OSG 10 July 2018, 17:05:36 UTC
4520b5c Invoke pycbc_inspiral with injections in the bundle build (#2233) * add dummy injections file * add a bank with one template for the injection run * run a set of injections to compile this code path * remove newline from arguments * fixed typo 10 July 2018, 16:30:38 UTC
729fa94 fix up lalsuite install docs (#2232) 10 July 2018, 13:03:16 UTC
376e9de add convenience methods to get value at time or freq (#2220) * add convenience methods to get value at time or freq * Update frequencyseries.py * rename methods 09 July 2018, 16:54:25 UTC
6dff494 add in array_cpu stuff (#2226) 06 July 2018, 13:08:51 UTC
1a7ebb9 cythonize the spa template generation (#2225) * example spa_tmplt not cythonized * actually commit the new code * climate * try this * better order * clean 06 July 2018, 12:08:00 UTC
57b6190 remove setup.py cruft in prep for cython support (#2224) 06 July 2018, 07:09:24 UTC
37e3d5e Add optimal detector functionality to conversions (#2223) * Add optimal detector functionality to conversions * Docstring and function names to match pycbc conventions 05 July 2018, 13:21:10 UTC
06a7cfc log pycbc live chunk end (#2216) * log pycbc chunk end * update 03 July 2018, 13:51:33 UTC
fc8af22 Use glue.ligolw again (#2221) * Remove pycbc.ligolw * Work with new table format * What is going on here?!? * Updating to glue changes 30 June 2018, 07:32:30 UTC
7d4314f allow graceful exit (#2192) 29 June 2018, 10:07:01 UTC
39b0cd5 https url for lalsuite (#2219) * https url for lalsuite * Make https the default 27 June 2018, 22:22:42 UTC
1b20241 add some basic metadata in setup.py (#2218) 27 June 2018, 09:49:34 UTC
0a3fba4 don't require pyrxp (#2203) 26 June 2018, 21:54:54 UTC
61868cf Clone lalsuite from git.ligo.org (#2217) 26 June 2018, 19:22:47 UTC
6898957 scatter_histograms.py: adding size option (#2213) * scatter_histograms.py: adding size option adds a size option to create_multidim_plot that gets passed to matplotlib scatter * fix indent for codeclimate 26 June 2018, 14:09:32 UTC
8603cac move back to dev (#2215) 26 June 2018, 13:43:07 UTC
e8046de bump glue again, bump release (#2214) * set back to dev * bump release, glue 26 June 2018, 08:56:10 UTC
5f81416 set to 1.11.0 release (#2211) 25 June 2018, 12:41:12 UTC
c8aa311 Add burn_in iterations (#2208) 22 June 2018, 15:36:16 UTC
b963a00 Add coa phase (#2210) * Add coa_phase to parameters * Add coalescence_phase 22 June 2018, 14:09:00 UTC
86fcfdb put wisdom import within try/except for pycbc live (#2207) * try wisdom importing * Update pycbc_live 21 June 2018, 13:53:31 UTC
7bb8a17 PyCBC Live: reorganize GraceDB I/O code (#2193) * PyCBC Live: reorganize some GraceDB code This makes the SingleCoincForGraceDB reusable by other scripts as a simpler interface to GraceDB and BAYESTAR. * Keep less variables around * Make SNR series calculation always-on, and fix a mistake * Add unit test for SingleCoincForGraceDB * Fix a glue-related error; better check of PSD document; remove unused var * Do not require GraceDb module, add more test cases * Uffa * Uffa (II) * Embed PSDs into coinc XML doc, further API simplification * Move gracedb_server arg to the call where it is actually needed * Handle gzipped events; try to save the climate * Will this fix the climate? * FIX THE CLIMATE! * Minor fixes * Newline * Fix error * try to normalize useage of singles * Update __all__ * Improve the climate * Fix errors * Oops * Fix this first * I hope that was it * Fix indentation 20 June 2018, 18:12:14 UTC
8149a5d Added option to provide a filter string in pycbc_plot_singles_vs_params (#2204) * Added option to provide filter function * Fixed quotes * Removed diagnostic print statement 20 June 2018, 16:24:14 UTC
2390e13 move checkpoint check after pool lock (#2200) * move checkpoint check after pool lock * add exceptions * update 20 June 2018, 15:34:42 UTC
288e6e8 bump glue dependency (#2205) 20 June 2018, 12:27:54 UTC
f5bc799 pass down lalsuite hash (#2201) * pass down lalsuite hash * typo * make option * typo * typo * must be full clone 19 June 2018, 08:49:04 UTC
ecb4a88 DEBUG (#2199) * DEBUG * Warning: Minotaurs hidden in tools directory * Try this??? * This must be it!! * Print *all* the file * Worth a try * Shouldn't need that * Into the rabbit hole * Remove cat statements * Remove this 19 June 2018, 08:48:48 UTC
981dd98 Enable pylint and edit CodeClimate config (#2198) * TESTING * Adding * Inspiration from GWIN 17 June 2018, 23:54:49 UTC
829a575 clean up modules related to strain preparation (#2197) * move strain preparation files into a single package * fixup calibration links * pass through strain functions * fix gate links * remove calibration package from setup.py * typos * change one more import 17 June 2018, 21:08:06 UTC
e12946a Update waveform.py (#2196) 13 June 2018, 11:57:02 UTC
dd0fbbe Fix bug introduced in error message (#2194) * Fix bug introduced in error message * Add parenthesis * Fix indentation 11 June 2018, 15:55:42 UTC
f9ff70c Including names of detectors available in lal (#2165) * Including names of detectors available in lal * Fix feedback * Fix typo 01 June 2018, 13:58:29 UTC
eb9c1e8 improve compatibility between pycbc and numpy arrays (#2176) * return scalar as expected for numpy passthrough methods * typo * improve compatibility with numpy arrays * bump numpy version to required one * pass through * better * more * fix * remove unused import 01 June 2018, 08:49:54 UTC
3ccc7aa Update setup.py 31 May 2018, 23:21:58 UTC
e71c5a0 Update setup.py 31 May 2018, 21:46:40 UTC
e13de19 Update MANIFEST.in 31 May 2018, 21:44:54 UTC
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