| bb133a4 | Duncan Brown | 15 August 2018, 19:22:05 UTC | print any messages to log | 15 August 2018, 19:22:05 UTC |
| 23847a6 | Duncan Brown | 15 August 2018, 19:20:23 UTC | Revert "update patch against ligo-proxy-utils-1.3.3-1.el7" This reverts commit f6c24e9628ef27607dff704df3bd1ae0d997ef6c. | 15 August 2018, 19:20:23 UTC |
| f6c24e9 | Duncan Brown | 15 August 2018, 19:11:36 UTC | update patch against ligo-proxy-utils-1.3.3-1.el7 | 15 August 2018, 19:11:36 UTC |
| 6e7ef6c | Duncan Brown | 15 August 2018, 17:53:05 UTC | set for 1.12.2 release (#2279) | 15 August 2018, 17:53:05 UTC |
| 94a494e | Alex Nitz | 15 August 2018, 17:44:55 UTC | simplify setup.py script (#2272) * simplify setup.py, add alias * no need to make user env file anymore, don't do it! * remove uneeded testing stuff * fixes * no unittest2 * another unittest2 mention * remove unused imports * minor changes * remove more cruft * combine package data finding with finding scripts * argparse isstandard in python 2.7, dropped support for 2.6 | 15 August 2018, 17:44:55 UTC |
| 5f63aa0 | Alex Nitz | 15 August 2018, 15:43:01 UTC | add support for injection / distribution tests, start on p3 tmpltbank test (#2277) * start on tmpltbank test * climate * fixes * poke * fixes * make sure to use ints * fix example for python3 * another int conversion | 15 August 2018, 15:43:01 UTC |
| 3b6f5b3 | Soumi De | 13 August 2018, 14:48:53 UTC | Add low-frequency cutoff option for every detector (#2266) * Add low-frequency cutoof option for every detector * ws * Make f_lower a dict in test_inference * fix codacy issues * fix codeclimate issue | 13 August 2018, 14:48:53 UTC |
| 404fc18 | Alex Nitz | 10 August 2018, 22:57:52 UTC | fix performance regression in qtransform (#2275) | 10 August 2018, 22:57:52 UTC |
| 6183917 | Alex Nitz | 10 August 2018, 22:54:59 UTC | fixes to make test fftw unthreaded work in python3 (#2276) | 10 August 2018, 22:54:59 UTC |
| 3633324 | Collin Capano | 02 August 2018, 07:24:18 UTC | fix inline bug (#2271) | 02 August 2018, 07:24:18 UTC |
| 13ac5ee | Anirban Ain | 01 August 2018, 13:46:33 UTC | Update companion.txt (#2270) request to add healpy. | 01 August 2018, 13:46:33 UTC |
| cfe2ee1 | Shaon Ghosh | 31 July 2018, 14:10:13 UTC | Trivial change fixing dictionary key sorting in analytical.py (#2269) * Trivial change fixing dictionary key sorting in analytical.py * Commented line removed | 31 July 2018, 14:10:13 UTC |
| c9ddd61 | Ian Harry | 29 July 2018, 16:28:29 UTC | Declare read-only file as read-only (#2267) | 29 July 2018, 16:28:29 UTC |
| 5c56518 | Ian Harry | 24 July 2018, 13:22:32 UTC | Some bug fixes (#2264) * Nearest_binary must be integer * Sanity checking in cutoff_indices * Thanks codacy * Silence Cognitive Complexity | 24 July 2018, 13:22:32 UTC |
| 4af3870 | Collin Capano | 24 July 2018, 08:43:25 UTC | Make transforms a kwarg to custom constraints (#2263) * make transforms a kwarg to custom constraints * update read_constraints_from_config | 24 July 2018, 08:43:25 UTC |
| ca0ea00 | Alex Nitz | 21 July 2018, 02:17:49 UTC | update pegasus version (#2259) * update pegasus version * simplify * upate * again * minor * test | 21 July 2018, 02:17:49 UTC |
| dcd4378 | Duncan Brown | 20 July 2018, 22:11:41 UTC | add losc https urls as fallback (#2261) | 20 July 2018, 22:11:41 UTC |
| c631fb2 | Duncan Brown | 20 July 2018, 21:33:29 UTC | set the LAL_DATA_PATH for the local site | 20 July 2018, 21:33:29 UTC |
| 32588b7 | Sebastian Khan | 20 July 2018, 16:27:36 UTC | fix err message in workflow/core.py (#2260) | 20 July 2018, 16:27:36 UTC |
| 2698efc | Duncan Brown | 19 July 2018, 19:56:49 UTC | Append the lalsuite hash to the cache file (#2251) Cache lal builds based on hash, update lal hash, and add ligo-segments | 19 July 2018, 19:56:49 UTC |
| 90876de | Tito Dal Canton | 18 July 2018, 07:07:29 UTC | optimal_snr: add verbosity for debugging bad approximants (#2255) * optimal_snr: add verbosity for debugging bad approximants * Add option for showing a progress bar with tqdm | 18 July 2018, 07:07:29 UTC |
| 5b39734 | Alex Nitz | 18 July 2018, 01:52:07 UTC | require astropy < 3 (#2252) * Update setup.py * Update requirements.txt | 18 July 2018, 01:52:07 UTC |
| 4d43877 | Alex Nitz | 17 July 2018, 02:31:04 UTC | Update setup.py | 17 July 2018, 02:31:04 UTC |
| 3dbc81c | Alex Nitz | 17 July 2018, 01:02:56 UTC | Update setup.py | 17 July 2018, 01:02:56 UTC |
| 1643945 | Alex Nitz | 17 July 2018, 01:01:52 UTC | Update .travis.yml | 17 July 2018, 01:01:52 UTC |
| 0729ad8 | Alex Nitz | 16 July 2018, 23:23:04 UTC | Update setup.py | 16 July 2018, 23:23:04 UTC |
| f3c1e7d | Alex Nitz | 16 July 2018, 19:48:22 UTC | allow pycbc to be installed in python3 (#2229) * allow pycbc to be installed in python3 * update * fix typo, use six for PY3 checking * ws | 16 July 2018, 19:48:22 UTC |
| 70d54c4 | Collin Capano | 16 July 2018, 19:01:16 UTC | Add chi_p and chi_eff from spherical conversions (#2244) * add chi_p and chi_eff from spherical conversions * fix pep8 issue * fix typo in test * fix another typo in the test | 16 July 2018, 19:01:16 UTC |
| 936824b | Alex Nitz | 16 July 2018, 13:57:27 UTC | allow pycbc live to resolve only the latest frames (#2230) * allow pycbc live to resolve only the latest frames * cleanup | 16 July 2018, 13:57:27 UTC |
| d18fafe | Alex Nitz | 12 July 2018, 17:06:01 UTC | directly use ligolwsegmentlist constructor (#2241) * directly use ligolwsegmentlist constructor * climate? * import error | 12 July 2018, 17:06:01 UTC |
| d0066dd | Ian Harry | 11 July 2018, 17:20:21 UTC | Don't open bank file for writing (#2242) | 11 July 2018, 17:20:21 UTC |
| d48f8ac | Collin Capano | 11 July 2018, 16:30:39 UTC | add chi_p to parameters (#2245) | 11 July 2018, 16:30:39 UTC |
| 18d350c | Collin Capano | 11 July 2018, 12:47:46 UTC | allow sections to read parameters be set on command line (#2240) | 11 July 2018, 12:47:46 UTC |
| ad08def | Collin Capano | 11 July 2018, 09:57:29 UTC | Make section names for distributions keyword args (#2239) * make sections to read variable_args a keyword argument * update doc string * break read_args_from_config into two separate functions * update test * simplify complexity, fix line continuation | 11 July 2018, 09:57:29 UTC |
| 4c3b550 | Collin Capano | 11 July 2018, 06:48:15 UTC | return default values if burn-in attrs haven't been written to file (#2237) | 11 July 2018, 06:48:15 UTC |
| 67d0fdc | Collin Capano | 11 July 2018, 06:24:46 UTC | make sure variables to frame cache are strings (#2238) | 11 July 2018, 06:24:46 UTC |
| e876fd1 | Collin Capano | 10 July 2018, 22:15:48 UTC | try to get labels from waveform.parameters (#2236) | 10 July 2018, 22:15:48 UTC |
| fe7aac3 | Collin Capano | 10 July 2018, 20:15:55 UTC | Updates to n acl burn-in (#2174) * only use second half of chain for n_acl burn-in * change default to 25 * fix checking for burn in update * ignore previous burn in * add acl interval * scale the acl interval based on number of iterations * change default nacls to 5 * undo skip burn in * change acl interval scaling | 10 July 2018, 20:15:55 UTC |
| ad51cf7 | Collin Capano | 10 July 2018, 17:49:09 UTC | Allow conversions to be used in PP dax (#2168) * read parameters for pp plots from ini file * move plot args back to inference section * allow for functions to be used in plot inj recovery * write files to output directory * move chdir so can load cp files * sanitize plot names * fix inference file path * properly parse parameters arguments * fix typo * don't remake run directory | 10 July 2018, 17:49:09 UTC |
| 74ba276 | Duncan Brown | 10 July 2018, 17:05:36 UTC | Tell PyCBC that LOSC frames are available on the OSG (#2235) * only the regular ligo frames are at UNL and CIT * LOSC frames are on the OSG | 10 July 2018, 17:05:36 UTC |
| 4520b5c | Duncan Brown | 10 July 2018, 16:30:38 UTC | Invoke pycbc_inspiral with injections in the bundle build (#2233) * add dummy injections file * add a bank with one template for the injection run * run a set of injections to compile this code path * remove newline from arguments * fixed typo | 10 July 2018, 16:30:38 UTC |
| 729fa94 | Alex Nitz | 10 July 2018, 13:03:16 UTC | fix up lalsuite install docs (#2232) | 10 July 2018, 13:03:16 UTC |
| 376e9de | Alex Nitz | 09 July 2018, 16:54:25 UTC | add convenience methods to get value at time or freq (#2220) * add convenience methods to get value at time or freq * Update frequencyseries.py * rename methods | 09 July 2018, 16:54:25 UTC |
| 6dff494 | Alex Nitz | 06 July 2018, 13:08:51 UTC | add in array_cpu stuff (#2226) | 06 July 2018, 13:08:51 UTC |
| 1a7ebb9 | Alex Nitz | 06 July 2018, 12:08:00 UTC | cythonize the spa template generation (#2225) * example spa_tmplt not cythonized * actually commit the new code * climate * try this * better order * clean | 06 July 2018, 12:08:00 UTC |
| 57b6190 | Alex Nitz | 06 July 2018, 07:09:24 UTC | remove setup.py cruft in prep for cython support (#2224) | 06 July 2018, 07:09:24 UTC |
| 37e3d5e | sfield17 | 05 July 2018, 13:21:10 UTC | Add optimal detector functionality to conversions (#2223) * Add optimal detector functionality to conversions * Docstring and function names to match pycbc conventions | 05 July 2018, 13:21:10 UTC |
| 06a7cfc | Alex Nitz | 03 July 2018, 13:51:33 UTC | log pycbc live chunk end (#2216) * log pycbc chunk end * update | 03 July 2018, 13:51:33 UTC |
| fc8af22 | Ian Harry | 30 June 2018, 07:32:30 UTC | Use glue.ligolw again (#2221) * Remove pycbc.ligolw * Work with new table format * What is going on here?!? * Updating to glue changes | 30 June 2018, 07:32:30 UTC |
| 7d4314f | Alex Nitz | 29 June 2018, 10:07:01 UTC | allow graceful exit (#2192) | 29 June 2018, 10:07:01 UTC |
| 39b0cd5 | Soumi De | 27 June 2018, 22:22:42 UTC | https url for lalsuite (#2219) * https url for lalsuite * Make https the default | 27 June 2018, 22:22:42 UTC |
| 1b20241 | Alex Nitz | 27 June 2018, 09:49:34 UTC | add some basic metadata in setup.py (#2218) | 27 June 2018, 09:49:34 UTC |
| 0a3fba4 | Alex Nitz | 26 June 2018, 21:54:54 UTC | don't require pyrxp (#2203) | 26 June 2018, 21:54:54 UTC |
| 61868cf | Soumi De | 26 June 2018, 19:22:47 UTC | Clone lalsuite from git.ligo.org (#2217) | 26 June 2018, 19:22:47 UTC |
| 6898957 | Sebastian Khan | 26 June 2018, 14:09:32 UTC | scatter_histograms.py: adding size option (#2213) * scatter_histograms.py: adding size option adds a size option to create_multidim_plot that gets passed to matplotlib scatter * fix indent for codeclimate | 26 June 2018, 14:09:32 UTC |
| 8603cac | Alex Nitz | 26 June 2018, 13:43:07 UTC | move back to dev (#2215) | 26 June 2018, 13:43:07 UTC |
| e8046de | Alex Nitz | 26 June 2018, 08:56:10 UTC | bump glue again, bump release (#2214) * set back to dev * bump release, glue | 26 June 2018, 08:56:10 UTC |
| 5f81416 | Alex Nitz | 25 June 2018, 12:41:12 UTC | set to 1.11.0 release (#2211) | 25 June 2018, 12:41:12 UTC |
| c8aa311 | Ian Harry | 22 June 2018, 15:36:16 UTC | Add burn_in iterations (#2208) | 22 June 2018, 15:36:16 UTC |
| b963a00 | Ian Harry | 22 June 2018, 14:09:00 UTC | Add coa phase (#2210) * Add coa_phase to parameters * Add coalescence_phase | 22 June 2018, 14:09:00 UTC |
| 86fcfdb | Alex Nitz | 21 June 2018, 13:53:31 UTC | put wisdom import within try/except for pycbc live (#2207) * try wisdom importing * Update pycbc_live | 21 June 2018, 13:53:31 UTC |
| 7bb8a17 | Tito Dal Canton | 20 June 2018, 18:12:14 UTC | PyCBC Live: reorganize GraceDB I/O code (#2193) * PyCBC Live: reorganize some GraceDB code This makes the SingleCoincForGraceDB reusable by other scripts as a simpler interface to GraceDB and BAYESTAR. * Keep less variables around * Make SNR series calculation always-on, and fix a mistake * Add unit test for SingleCoincForGraceDB * Fix a glue-related error; better check of PSD document; remove unused var * Do not require GraceDb module, add more test cases * Uffa * Uffa (II) * Embed PSDs into coinc XML doc, further API simplification * Move gracedb_server arg to the call where it is actually needed * Handle gzipped events; try to save the climate * Will this fix the climate? * FIX THE CLIMATE! * Minor fixes * Newline * Fix error * try to normalize useage of singles * Update __all__ * Improve the climate * Fix errors * Oops * Fix this first * I hope that was it * Fix indentation | 20 June 2018, 18:12:14 UTC |
| 8149a5d | Thomas Massinger | 20 June 2018, 16:24:14 UTC | Added option to provide a filter string in pycbc_plot_singles_vs_params (#2204) * Added option to provide filter function * Fixed quotes * Removed diagnostic print statement | 20 June 2018, 16:24:14 UTC |
| 2390e13 | Alex Nitz | 20 June 2018, 15:34:42 UTC | move checkpoint check after pool lock (#2200) * move checkpoint check after pool lock * add exceptions * update | 20 June 2018, 15:34:42 UTC |
| 288e6e8 | Alex Nitz | 20 June 2018, 12:27:54 UTC | bump glue dependency (#2205) | 20 June 2018, 12:27:54 UTC |
| f5bc799 | Alex Nitz | 19 June 2018, 08:49:04 UTC | pass down lalsuite hash (#2201) * pass down lalsuite hash * typo * make option * typo * typo * must be full clone | 19 June 2018, 08:49:04 UTC |
| ecb4a88 | Ian Harry | 19 June 2018, 08:48:48 UTC | DEBUG (#2199) * DEBUG * Warning: Minotaurs hidden in tools directory * Try this??? * This must be it!! * Print *all* the file * Worth a try * Shouldn't need that * Into the rabbit hole * Remove cat statements * Remove this | 19 June 2018, 08:48:48 UTC |
| 981dd98 | Ian Harry | 17 June 2018, 23:54:49 UTC | Enable pylint and edit CodeClimate config (#2198) * TESTING * Adding * Inspiration from GWIN | 17 June 2018, 23:54:49 UTC |
| 829a575 | Alex Nitz | 17 June 2018, 21:08:06 UTC | clean up modules related to strain preparation (#2197) * move strain preparation files into a single package * fixup calibration links * pass through strain functions * fix gate links * remove calibration package from setup.py * typos * change one more import | 17 June 2018, 21:08:06 UTC |
| e12946a | Alex Nitz | 13 June 2018, 11:57:02 UTC | Update waveform.py (#2196) | 13 June 2018, 11:57:02 UTC |
| dd0fbbe | Miriam Cabero | 11 June 2018, 15:55:42 UTC | Fix bug introduced in error message (#2194) * Fix bug introduced in error message * Add parenthesis * Fix indentation | 11 June 2018, 15:55:42 UTC |
| f9ff70c | Ian Harry | 01 June 2018, 13:58:29 UTC | Including names of detectors available in lal (#2165) * Including names of detectors available in lal * Fix feedback * Fix typo | 01 June 2018, 13:58:29 UTC |
| eb9c1e8 | Alex Nitz | 01 June 2018, 08:49:54 UTC | improve compatibility between pycbc and numpy arrays (#2176) * return scalar as expected for numpy passthrough methods * typo * improve compatibility with numpy arrays * bump numpy version to required one * pass through * better * more * fix * remove unused import | 01 June 2018, 08:49:54 UTC |
| 3ccc7aa | Alex Nitz | 31 May 2018, 23:21:58 UTC | Update setup.py | 31 May 2018, 23:21:58 UTC |
| e71c5a0 | Alex Nitz | 31 May 2018, 21:46:40 UTC | Update setup.py | 31 May 2018, 21:46:40 UTC |
| e13de19 | Alex Nitz | 31 May 2018, 21:44:54 UTC | Update MANIFEST.in | 31 May 2018, 21:44:54 UTC |
| 3ab54cd | Alex Nitz | 31 May 2018, 13:51:59 UTC | revert version to development. (#2188) * bump version * revert version to development | 31 May 2018, 13:51:59 UTC |
| 0195bbb | Alex Nitz | 31 May 2018, 12:33:52 UTC | bump version (#2187) | 31 May 2018, 12:33:52 UTC |
| bc598ec | Alex Nitz | 30 May 2018, 20:29:13 UTC | update Dockerfile (#2186) | 30 May 2018, 20:29:13 UTC |
| 472fee4 | Alex Nitz | 30 May 2018, 15:43:39 UTC | Update .travis.yml | 30 May 2018, 15:43:39 UTC |
| f6be944 | Alex Nitz | 30 May 2018, 15:36:29 UTC | centralize and update lalsuite hash (#2183) * centralize and update lalsuite hash * move to the standard lalsuite git location now | 30 May 2018, 15:36:29 UTC |
| c1a8799 | Peter Couvares | 29 May 2018, 21:39:57 UTC | Document how Travis secure strings are constructed (#2137) * document meaning/purpose of global strings * clarified comment s/global/secure/ | 29 May 2018, 21:39:57 UTC |
| b877947 | Alex Nitz | 29 May 2018, 20:03:04 UTC | Update README.md | 29 May 2018, 20:03:04 UTC |
| 31b66b6 | Alex Nitz | 29 May 2018, 20:01:09 UTC | add some simple install instructions (#2181) * install * stuff | 29 May 2018, 20:01:09 UTC |
| 123f73c | Thomas Dent | 28 May 2018, 12:08:44 UTC | Update waveform.py (#2177) | 28 May 2018, 12:08:44 UTC |
| 51ca948 | Bernd Machenschalk | 25 May 2018, 00:18:29 UTC | E@H: hotfix for Windos/Cygwin build until lscsoft-glue#40 was merged (#2171) - should automatically become ineffective once branch 'bema-ligo/fix_eah_windows' is deleted, i.e. https://git.ligo.org/lscsoft/glue/merge_requests/40 was merged. | 25 May 2018, 00:18:29 UTC |
| 149bed1 | Alex Nitz | 24 May 2018, 16:40:43 UTC | return scalar as expected for numpy passthrough methods (#2175) * return scalar as expected for numpy passthrough methods * typo | 24 May 2018, 16:40:43 UTC |
| 5c80c8f | Alex Nitz | 22 May 2018, 19:21:40 UTC | free the plan for fftw and mkl (#2172) | 22 May 2018, 19:21:40 UTC |
| 88483a8 | Miriam Cabero | 22 May 2018, 18:06:00 UTC | Error message for fake strain with injections (#2173) * Error message for fake straing with injections * Be more specific on error message * Avoid repetitions * Fix codeclimate issue? * Fix codeclimate issue? I don't know what it wants! * Correct indentation | 22 May 2018, 18:06:00 UTC |
| 36afd28 | Josh Willis | 19 May 2018, 21:20:51 UTC | Update documentation on OSG running (#2170) | 19 May 2018, 21:20:51 UTC |
| 7778974 | Collin Capano | 16 May 2018, 16:45:05 UTC | Simplify ACL algorithm (#2160) * use algorithm from Sokal et al for computing ACL * fix whitespace | 16 May 2018, 16:45:05 UTC |
| 28ed891 | Duncan Macleod | 15 May 2018, 16:59:55 UTC | setup: unfix astropy requirement (#2166) >=2.0.3 is fine as long as <3 | 15 May 2018, 16:59:55 UTC |
| 528ca5e | Collin Capano | 15 May 2018, 13:40:12 UTC | Only re-calculate burn-in if needed (#2147) * only re-calculate burn-in if needed * fix typo | 15 May 2018, 13:40:12 UTC |
| eef5754 | Soumi De | 15 May 2018, 11:58:09 UTC | Remove primary/secondary mass constraints in chi_a transforms/conversions (#2156) | 15 May 2018, 11:58:09 UTC |
| 98877c2 | Thomas Massinger | 14 May 2018, 20:40:15 UTC | Install six>=1.10.0 (#2164) | 14 May 2018, 20:40:15 UTC |
| 6071086 | Alex Nitz | 10 May 2018, 20:46:33 UTC | allow for the whitening psd to be returned (#2161) | 10 May 2018, 20:46:33 UTC |
| d3d0c99 | Alex Nitz | 10 May 2018, 19:19:23 UTC | remove the future module (#2162) * remove old INSTALL parts * remove future.y * update scipy requirements * update zpk to use scipy * update results to use python htmlparser * bump matplotlib requirements * no more future module | 10 May 2018, 19:19:23 UTC |
| 36d0ac8 | Alex Nitz | 10 May 2018, 16:39:55 UTC | Create CODE_OF_CONDUCT.md (#2142) * Create CODE_OF_CONDUCT.md Add the suggested code of conduct from github. * Update CODE_OF_CONDUCT.md | 10 May 2018, 16:39:55 UTC |
| e1360c1 | Andrew R. Williamson | 09 May 2018, 19:45:57 UTC | Avoid repeatedly applying the padding (#2159) | 09 May 2018, 19:45:57 UTC |
| 5224b50 | Collin Capano | 04 May 2018, 09:37:58 UTC | Add burn in that uses the minimum of max posterior and n acl (#2148) * add max_posterior or n_acl burn in * fix typo | 04 May 2018, 09:37:58 UTC |
