| 8c20ee2 | Duncan Brown | 17 January 2017, 20:37:22 UTC | Set for 1.6.3 release (#1373) | 17 January 2017, 20:37:22 UTC |
| 830c0e7 | Duncan Brown | 17 January 2017, 20:37:02 UTC | Use dqsegdb from official repo (#1377) | 17 January 2017, 20:37:02 UTC |
| 5191856 | Christopher M. Biwer | 17 January 2017, 19:33:00 UTC | Add frame writing example. (#1374) | 17 January 2017, 19:33:00 UTC |
| 8d76c7c | Thomas Dent | 17 January 2017, 17:01:34 UTC | more help for human beings to understand binned histogram (#1365) | 17 January 2017, 17:01:34 UTC |
| 402e021 | Alex Nitz | 17 January 2017, 16:17:58 UTC | Update README.md (#1372) | 17 January 2017, 16:17:58 UTC |
| 8248751 | Andrew R. Williamson | 17 January 2017, 09:59:31 UTC | Getting pycbc_multi_inspiral to run to completion (#1339) * Getting pycbc_multi_inspiral to run to completion * Changing the writing out of multi IFO triggers * Adding exception types per code quality check | 17 January 2017, 09:59:31 UTC |
| e1cf292 | Ian Harry | 13 January 2017, 11:24:49 UTC | Generalize sngl_minifollowups (#1368) * Generalize single mini-followups * Fixing previous * Fix bug * One too many spaces | 13 January 2017, 11:24:49 UTC |
| 36bbb9a | Alex Nitz | 13 January 2017, 09:58:30 UTC | Fix issue with sigmasq caching, fix dtype of inner product (#1347) * enable sigmasq caching without sigmsq cumulative vector, fix dtype of inner product output * remove unused variable | 13 January 2017, 09:58:30 UTC |
| cbb1427 | Steven Reyes | 12 January 2017, 19:55:36 UTC | Distributions examples for Documentation Purposes (#1367) * Redo the branch and add all of the example scripts from a previous branch * Add the distributions rst from a previous branch to this new branch. * Make some edits to the comments and indentations in these files * Change confusing labels for mass distributions to something more intuitive. * Remove numpy call, no longer needed in this PR * Change some comments around. * Change mass bins to bins. * Change bin size to 50. * Add more samples and more bins to histograms. | 12 January 2017, 19:55:36 UTC |
| e99940d | Alex Nitz | 11 January 2017, 19:41:40 UTC | Add more examples to our documentation page (#1348) * update documentation with some more examples * add chisq time series example * remove extra psd * Update frequency.py * Update analytic.py * Update estimate.py * Add query and read example for frames. * Update label of plot. | 11 January 2017, 19:41:40 UTC |
| 57ffaca | Bernd Machenschalk | 10 January 2017, 06:48:29 UTC | use PYTHONCOMPILED as lockfile_dir (#1353) | 10 January 2017, 06:48:29 UTC |
| bf2bf25 | Bernd Machenschalk | 06 January 2017, 05:47:01 UTC | write out weave cache settings only if INITIAL_LOG_LEVEL >= 10 (#1361) * logginng module has not been initialized at this point | 06 January 2017, 05:47:01 UTC |
| 939c7af | Ian Harry | 06 January 2017, 05:45:18 UTC | Fix documentation building errors (#1360) | 06 January 2017, 05:45:18 UTC |
| 332cbef | Tito Dal Canton | 06 January 2017, 05:40:56 UTC | pycbc_plot_bank_bins: enable choice of x and y axes (#1363) | 06 January 2017, 05:40:56 UTC |
| c82e3ed | Ian Harry | 05 January 2017, 18:14:40 UTC | Tmpltbank params update rebase (#1354) * Working on tmpltbank updates * Changes to complete the template bank move to masses/spins * Create a new lambda_mapping function * New get_chirp_params * Optimizing, as much as possible * Thanks landscape * Thanks landscape and QC * Thanks again landscape * Make the dynamic docs work * Removed R2F4 so must update tests * Update executables that are not used in uberbank * Doc fix in tmpltbank module * Tito's commments - Thanks! | 05 January 2017, 18:14:40 UTC |
| cb67a69 | Christopher M. Biwer | 04 January 2017, 15:35:28 UTC | Move gating functions and options from pycbc_inference to its own module (#1358) * Move gating functions out of pycbc_inference into their own module/ * Add gates options group. * Whitespace. * Rename module from gates to gate. * Fix shebang line in HTML code. | 04 January 2017, 15:35:28 UTC |
| 7fe42a6 | Ian Harry | 04 January 2017, 09:02:26 UTC | Fix edge-condition in singles_timefreq (#1356) * Fix timefreq to deal with segment boundaries * Still fixing singles_timefreq | 04 January 2017, 09:02:26 UTC |
| d500b77 | Thomas Dent | 04 January 2017, 08:41:06 UTC | Allow log axis for f-m plots (#1357) | 04 January 2017, 08:41:06 UTC |
| f319925 | Christopher M. Biwer | 04 January 2017, 03:45:32 UTC | Remove setting measure level to 0 in pycbc_inference. (#1359) | 04 January 2017, 03:45:32 UTC |
| 0c81ee2 | Christopher M. Biwer | 02 January 2017, 22:23:04 UTC | Adds flat_unity PSD model (#1355) * Add PyCBC coded unity PSD model. * Rename model to flat_unity. * Remove debug. * Match function name and command line option name. * Fix log statement typo. | 02 January 2017, 22:23:04 UTC |
| 9c2899d | sturani | 21 December 2016, 18:45:02 UTC | Test rate (#1351) * Modified vcsinfo in test/test_lalsim.py * Added rate test to test/test_lalsim.py | 21 December 2016, 18:45:02 UTC |
| e1715f4 | Ian Harry | 20 December 2016, 20:48:25 UTC | PyCBC bank codes will use HDF5 format (#1343) * PyCBC bank codes will use HDF5 format * Issue on rebasing * Adding check at end of code | 20 December 2016, 20:48:25 UTC |
| 4693e64 | Ian Harry | 19 December 2016, 20:32:54 UTC | Show both command lines on sngl plots (#1346) * Show both command lines * Fix newline characters | 19 December 2016, 20:32:54 UTC |
| 99cd3f2 | Miriam Cabero | 19 December 2016, 15:35:21 UTC | Distribution for pycbc_inference that reads parameters from a file (#1303) * First steps for making distributions for pycbc_inference reading parameters from a file * Change documentations, add attributes, details to make distribution class work * Sanity checks in function get_kde_from_file * Make rvs return a structured array, modify __init__ * Add bounds and normalization. * Fix QuantifiedCode and Codacy issues * Add function to read file name from config file. * Fix bugs * Fix codacy issue * Implement most of Chris's comments * Implement Chris' comments * Fix bugs * Change 'type' for 'isinstance' as requested by Codacy * Implement request from QuantifiedCode | 19 December 2016, 15:35:21 UTC |
| ea9e2e1 | Thomas Dent | 19 December 2016, 08:52:59 UTC | tweak to loudest single trigger section names (#1345) | 19 December 2016, 08:52:59 UTC |
| ecd8b78 | Ian Harry | 16 December 2016, 20:29:50 UTC | Support Michael (#1341) | 16 December 2016, 20:29:50 UTC |
| 1e1542a | Ian Harry | 16 December 2016, 19:16:05 UTC | Fixes for pycbc_generate_hwinj (#1342) * Fix up pycbc_generate_hwinj * REmove newline * Remove debugging * FIx the logic tests | 16 December 2016, 19:16:05 UTC |
| 21b81ce | Andrew R. Williamson | 16 December 2016, 16:00:44 UTC | Fixing broken hdf5 url in docs (#1344) | 16 December 2016, 16:00:44 UTC |
| 87b5e73 | Collin Capano | 15 December 2016, 16:25:06 UTC | fix format value to include the minus sign (#1340) | 15 December 2016, 16:25:06 UTC |
| 03745e5 | Miriam Cabero | 13 December 2016, 15:55:03 UTC | Fix bug in pycbc_ringinj (#1337) | 13 December 2016, 15:55:03 UTC |
| abe5976 | Collin Capano | 12 December 2016, 14:54:15 UTC | Add ability to set kombine's update interval and only save points since last checkpoint (#1309) * add the ability to set an update interval for kombine * only save newest points to file when checkpointing * add ability to clear memory of chain after it has been written * fix bug * fix offsets after clear * fix typo * add ability to resize arrays * fix bug in max iterations * fix more bugs * fix bug in iteration storage * fix bug that caused kombine to reset every checkpoint * completely empty the chain and blobs when clearing * add clear chain to emcee * slight rearrangement * update pt sampler * fix bugs * update emcee's write_results * ensure data is saved with same dtype as what's in memory * fix bugs in emcee samplers * improve help message for update-interval * fix bug in dtype of stats * remove unused variable * rename aa,bb * fix bug in last commit | 12 December 2016, 14:54:15 UTC |
| cf06a95 | Ian Harry | 12 December 2016, 09:40:00 UTC | Adding hdf5 as alternative extension This matches what sbank is allowing. | 12 December 2016, 10:10:57 UTC |
| f5ceb0b | Soumi De | 10 December 2016, 21:40:37 UTC | Fixed QuantifiedCode issues | 12 December 2016, 10:10:57 UTC |
| efd0a10 | Soumi De | 10 December 2016, 20:08:02 UTC | Moved checking and converting input template bank format to setup_tmpltbank_workflow | 12 December 2016, 10:10:57 UTC |
| a188aaf | Soumi De | 09 December 2016, 19:49:45 UTC | Changes to make pycbc_make_coinc_search_worflow flexible to reading in a template bank in both hdf and xml format | 12 December 2016, 10:10:57 UTC |
| 3d0ae82 | Duncan Brown | 09 December 2016, 19:00:24 UTC | Set back to development (#1333) | 09 December 2016, 19:00:24 UTC |
| afa2fb9 | Thomas Dent | 08 December 2016, 19:44:29 UTC | Docfix (#1334) * fix docs to no longer have make_hdf_coinc_workflow * Typos | 08 December 2016, 19:44:29 UTC |
| 075d581 | Ian Harry | 08 December 2016, 16:32:25 UTC | This might fix landscape (#1332) | 08 December 2016, 16:32:25 UTC |
| bed7c4f | Duncan Brown | 08 December 2016, 13:44:46 UTC | Set for 1.6.2 release (#1330) | 08 December 2016, 13:44:46 UTC |
| e59653e | Collin Capano | 07 December 2016, 18:44:52 UTC | don't use self version of apply cyclic, so can pickle (#1329) | 07 December 2016, 18:44:52 UTC |
| 50cddaa | Duncan Brown | 07 December 2016, 16:42:39 UTC | escape shell special chars in start script (#1327) | 07 December 2016, 16:42:39 UTC |
| c23c730 | Sebastian Khan | 07 December 2016, 12:52:50 UTC | fix numrel_data LALDict entry in waveform (#1325) | 07 December 2016, 12:52:50 UTC |
| 43b9fa0 | Ian Harry | 07 December 2016, 10:50:10 UTC | Update versioning (#1324) * Update versioning information * Fix previous versioning changes * eval -> getattr | 07 December 2016, 10:50:10 UTC |
| 8db6b5d | Ian Harry | 06 December 2016, 20:58:23 UTC | Minor fix The extension should include the ".": ".hdf" not "hdf" | 06 December 2016, 21:30:43 UTC |
| 3881c3f | Andrew Williamson | 06 December 2016, 18:52:21 UTC | Document PycbcSplitBankXmlExecutable class | 06 December 2016, 21:30:43 UTC |
| dfa8848 | Andrew Williamson | 06 December 2016, 18:40:49 UTC | Make PycbcSplitBankXmlExecutable a subclass | 06 December 2016, 21:30:43 UTC |
| 776c845 | Andrew Williamson | 05 December 2016, 22:14:19 UTC | Reinstating pycbc_splitbank as executable class | 06 December 2016, 21:30:43 UTC |
| 0c7dd50 | Duncan Brown | 06 December 2016, 16:53:53 UTC | Set back to development (#1322) | 06 December 2016, 16:53:53 UTC |
| 3caf805 | Ian Harry | 06 December 2016, 16:43:15 UTC | Ensure minimum data length is always an option (#1323) | 06 December 2016, 16:43:15 UTC |
| 88a6d74 | Duncan Brown | 06 December 2016, 13:48:51 UTC | Update setup.py (#1313) | 06 December 2016, 13:48:51 UTC |
| 009a340 | Duncan Brown | 06 December 2016, 13:47:13 UTC | Update install documentation (#1320) * set pegasus version to 4.7.2 * default is to install from pypi * add note about rom data | 06 December 2016, 13:47:13 UTC |
| 4cac7ad | Tito Dal Canton | 05 December 2016, 15:46:08 UTC | Improve edge case handling in pycbc_single_template (#1314) Fixes #1311. | 05 December 2016, 15:46:08 UTC |
| 63159d7 | Ian Harry | 05 December 2016, 11:01:04 UTC | Changes to make test cases work (#1172) * Changes to make test cases work * Remove debugging print statement | 05 December 2016, 11:01:04 UTC |
| 545b80a | Collin Capano | 04 December 2016, 22:21:21 UTC | add thin-end option to plot_acceptance_rate (#1317) | 04 December 2016, 22:21:21 UTC |
| b02e2b2 | Soumi De | 04 December 2016, 08:20:00 UTC | Added caption and corrected labels of waveform plot (#1316) | 04 December 2016, 08:20:00 UTC |
| 28ee862 | Duncan Brown | 02 December 2016, 21:16:43 UTC | Set to use V4v2 ROM data (#1312) | 02 December 2016, 21:16:43 UTC |
| e5c104f | Tito Dal Canton | 02 December 2016, 16:31:59 UTC | Enable log-log bank plot (#1307) | 02 December 2016, 16:31:59 UTC |
| c35bc5d | Duncan Brown | 02 December 2016, 16:31:53 UTC | Set to development (#1305) | 02 December 2016, 16:31:53 UTC |
| 90cb36d | Duncan Brown | 02 December 2016, 16:04:00 UTC | Fix typo and catch other open statement (#1306) | 02 December 2016, 16:04:00 UTC |
| e2c46f3 | Duncan Brown | 02 December 2016, 03:12:13 UTC | Set for 1.6.0 release (#1300) | 02 December 2016, 03:12:13 UTC |
| 3de1ab0 | Lorena Magaña Zertuche | 01 December 2016, 17:17:40 UTC | Fixes the IOError in pycbc_coinc_mergetrigs (#1304) * Adds error message when an hdf file cannot be opened. * adds raise IOError | 01 December 2016, 17:17:40 UTC |
| be05369 | Sebastian Khan | 01 December 2016, 15:38:35 UTC | update inferece doc with PSD_INVERSE_LENGTH (#1295) * update inferece doc with PSD_INVERSE_LENGTH also added OMP_NUM_THREADS=1 before calling pycbc_inference * change walkers and add comment to OpenMP * change SEGLEN to 8 seconds * add some docstring about OMP | 01 December 2016, 15:38:35 UTC |
| fdb6831 | Lorena Magaña Zertuche | 30 November 2016, 21:15:16 UTC | pycbc_coinc_mergetrigs should report which open failed (#1302) * Adds error message when an hdf file cannot be opened. * adds error message when a hdf file cannot be opened * Update pycbc_coinc_mergetrigs * Added logging.warning() instead of printing | 30 November 2016, 21:15:16 UTC |
| 8efa303 | Alex Nitz | 30 November 2016, 21:05:21 UTC | make sure bank2hdf also looks for f_lower column by default (#1301) | 30 November 2016, 21:05:21 UTC |
| f8755f3 | Duncan Brown | 30 November 2016, 17:28:42 UTC | Update lalsuite version and fix a bug in waveform.py (#1297) * Update the lalsuite version Set the lalsuite version to the commit https://versions.ligo.org/cgit/lalsuite/commit/?id=a2a5a476d33f169b8749e2840c306a48df63c936 * Update pegasus and install numpy before lal * Fix missing import of lal module | 30 November 2016, 17:28:42 UTC |
| b44acd9 | Duncan Brown | 30 November 2016, 15:37:43 UTC | Compatibility with new lalsimulation waveform interface (#1224) * Call to ChooseT(F)DWaveform compatible with new interface. * Corrected some typo in get_td(fd)_waveform new interface. * set lal checkout to include new interface * use new interface for SimInspiralTaylorF2AlignedPhasing() | 30 November 2016, 15:37:43 UTC |
| 949f9ba | Collin Capano | 30 November 2016, 10:35:02 UTC | Some bug fixes to the new posterior plots (#1283) * add ability to set min/maxs; rotated marginal plot * make smaller mariginal plots optional; scale fontsizes appropriately for figure size * add mins/maxs and small-marginals to cli; standardize new options across plot_posterior and plot_movie * fix typos * make smaller marginals automatic, only for 2 parameters; also remove constant offsets * adjust fontsizes * remove diagonals if not plotting marginals * make show-colorbar automatic * fix some bugs in plot_movie * address minor issues tagged by quantified code and codacy * fix whitespace * change default colors * change default colors; increase linewidths * change default scatter points color | 30 November 2016, 10:35:02 UTC |
| b86c81c | Thomas Dent | 29 November 2016, 22:28:09 UTC | Durationstuff (#1279) * waveform and pnutils: rationalize duration functions * fix coinc bin parsing function to have backward compatibility * use SEOBNRv4 duration or read smoothing parameter from template fit file | 29 November 2016, 22:28:09 UTC |
| 08e8127 | Soumi De | 28 November 2016, 16:17:32 UTC | Code changes made to replace pycbc_splitbank with pycbc_hdf5_splitbank in pycbc_make_coinc_search_workflow (#1289) * Changes made to run pycbc_hdf5_splitbank using v1.5.10 * white space * Added comments | 28 November 2016, 16:17:32 UTC |
| 75ceca5 | Collin Capano | 28 November 2016, 14:31:22 UTC | remove inference examples; these have been superceded by the documentation page (#1288) | 28 November 2016, 14:31:22 UTC |
| 40f218a | Collin Capano | 28 November 2016, 14:31:02 UTC | Add cyclic and reflected boundaries (#1149) * add boundary utils * rework boundary classes; create a single bounds class for different intervals * add getitem to Bounds * make cyclic a property * first stab at making distributions use bounds classes and apply boundary conditions * fix some typos * make sin angle cos angle just reflect between 0, pi * add some documentation * use Bounds class in Gaussian, fix its normalization, and have its rvs return a structured array * add apply boundary conditions to likelihood and prior evaluators * fix typo * write conditioned parameters to file * fix whitespace; address other codacy issues * make apply_boundary_conditions ignore extra args; fix some bugs * fix typos * do not use reflected boundaries as defaults, and warn user if a reflected boundary is used in a prior * fix typo in doc string * renamed boundary_utils to boundaries.py * fix bug in uniform angle that caused bounds type to change | 28 November 2016, 14:31:02 UTC |
| 3dc36a4 | Collin Capano | 24 November 2016, 10:03:04 UTC | Fix minor bugs in FieldArray and WaveformArray (#1284) * fix waveform array derived parameters if shape is not 1D * fix bug when only single virtual field is added | 24 November 2016, 10:03:04 UTC |
| b745fef | Miriam Cabero | 23 November 2016, 09:40:23 UTC | Scatter plots of the ln(likelihood) and histograms for results from inference (#1050) * Scatter plots of the ln(likelihood) and histograms for results from pycbc_inference * Remove commented lines * Add option to choose number of values after the decimal point in str_utils * Mostly style changes * Close hdf file after reading * Fix little bug * update for new likelihood read * add ability to plot prior, use bbox_inches when saving fig * scale fonts, adjust point size * rename plot_lnpost to plot_scatter * make setting up corner grid a separate function * add contour plot * add contour plots * reduce the number of ticks, switch to gridspec * combine density, contour, and scatter into a single plotting code * rename plot_posterior -> plot_corner; plot_scatter -> plot_posterior * fix typo * add description of z-args to help message * Changes in script for movie plots * Adapt plot_movie to changes in scatter_histograms and change contour-color default * Fixing landscape/codacy issues * Fixing landscape/codacy issues * Put back Chris's changes * use add_*_option_group in plot_posterior * Update workflow documentation | 23 November 2016, 09:40:23 UTC |
| c57cd0d | Duncan Brown | 22 November 2016, 20:49:15 UTC | Set back to dev (#1282) | 22 November 2016, 20:49:15 UTC |
| e58ed8b | Duncan Brown | 22 November 2016, 18:23:37 UTC | Set for v1.5.10 (#1274) | 22 November 2016, 18:23:37 UTC |
| a5053ee | Thomas Dent | 22 November 2016, 18:22:59 UTC | fix periodic remove line in pegasus properties (#1280) | 22 November 2016, 18:22:59 UTC |
| 27130b9 | Tito Dal Canton | 21 November 2016, 19:36:14 UTC | plot_singles_vs_params: let user set x-y ranges (#1278) | 21 November 2016, 19:36:14 UTC |
| 344d294 | Alex Nitz | 21 November 2016, 17:03:32 UTC | put if switch ahead of concatenation (#1276) | 21 November 2016, 17:03:32 UTC |
| 33a5e1f | Ian Harry | 21 November 2016, 15:33:59 UTC | Fixes to sharedoptions section (#1277) * Fixes to sharedoptions section * Fix to shareedoptions | 21 November 2016, 15:33:59 UTC |
| 85c9c1f | Duncan Brown | 21 November 2016, 13:44:29 UTC | Remove the profile hints.executionPool (#1268) | 21 November 2016, 13:44:29 UTC |
| fa0ab3d | Duncan Brown | 21 November 2016, 13:36:07 UTC | always say the executable is not installed (#1271) | 21 November 2016, 13:36:07 UTC |
| 0a7b2e9 | Duncan Brown | 20 November 2016, 20:51:35 UTC | add a note about aei hdf5 location (#1267) Tested, seems to work | 20 November 2016, 20:51:35 UTC |
| 6a92c0d | Duncan Brown | 20 November 2016, 15:09:35 UTC | Set back to development (#1266) | 20 November 2016, 15:09:35 UTC |
| 88ec002 | Duncan Brown | 20 November 2016, 15:08:13 UTC | Fix the way that executables are added to the DAX (#1265) * simplify execution site code and fix bug * improve error message | 20 November 2016, 15:08:13 UTC |
| 155a8dd | Duncan Brown | 20 November 2016, 13:04:00 UTC | Set for 1.5.9 (#1263) | 20 November 2016, 13:04:00 UTC |
| 8bf2981 | Soumi De | 19 November 2016, 23:28:40 UTC | Remove --cache from the arguments to be added to pycbc_submit_dax in pycbc_make_coinc_search_workflow running docs. (#1261) | 19 November 2016, 23:28:40 UTC |
| d798ffd | Alex Nitz | 19 November 2016, 23:28:28 UTC | initialize findtrigs with empty list (#1262) | 19 November 2016, 23:28:28 UTC |
| bfe546c | Duncan Brown | 18 November 2016, 18:49:41 UTC | Set back to development (#1258) * Set for 1.5.8 release * Set back to development | 18 November 2016, 18:49:41 UTC |
| ccaf9a3 | Duncan Brown | 18 November 2016, 18:47:47 UTC | Set for 1.5.8 release (#1256) | 18 November 2016, 18:47:47 UTC |
| e321089 | Duncan Brown | 18 November 2016, 18:47:24 UTC | Minor bug fixes for OSG running (#1260) * added note about PYTHONUSERBASE and XDG_CACHE_HOME * do not make a proxy from a proxy * add instructions to use the cvmfs bundle | 18 November 2016, 18:47:24 UTC |
| 899c171 | John Veitch | 18 November 2016, 18:14:29 UTC | Faster pycbc_generate_hwinj (#1257) * pycbc_generate_hwinj: Don't compute waveform twice * pycbc_generate_hwinj: Don't reset network SNR | 18 November 2016, 18:14:29 UTC |
| aef71dd | Duncan Brown | 18 November 2016, 17:58:11 UTC | added note about PYTHONUSERBASE and XDG_CACHE_HOME (#1259) | 18 November 2016, 17:58:11 UTC |
| bf396e2 | Alex Nitz | 18 November 2016, 17:27:34 UTC | raise error if timeslide interval is smaller than time_window (#1210) * raise error if timeslide interval is smaller than time_window between detectors * update message * allow no timeslides again * Update pycbc_coinc_findtrigs | 18 November 2016, 17:27:34 UTC |
| 19fd9ce | Thomas Dent | 18 November 2016, 13:49:51 UTC | Rainbow hist (#1249) * adding capability to produce single hists split over template duration * Enable binned trig fitting code to produce results page style output * coinc_workflow: put a binned newsnr hist on the summary page | 18 November 2016, 13:49:51 UTC |
| d611972 | Steven Reyes | 17 November 2016, 20:21:13 UTC | Change the binning in histograms in pycbc_page_snrratehist (#1254) * Change the way that we bin histograms for this plot. The code before was trying to be clever in the way it decided minimum and maximum bounds for binning up the space. This changes it to a naive method of just take the min of the data, and max of the data, space it evenly with a fudge factor of two extra bins in case the min = max. This code inherits the problem that it will fall over if there are no background triggers in a bin, but that can be remedied easily if we come to it. * The initial commit used bins that were different for foreground triggers, inclusive background, and exclusive background. This forces them to be all the same. It also changes the minimum when looking at foreground triggers, if there's only one foreground trigger minimum = fstat.min() = maximum = fstat.max() which ruins binning for histograms. So, instead just do what we do for maximum in the case that you are looking at the open box. Let minimum = min(fstat.min(), bstat.min()) * We don't need the symmetric binning around minimum - args.bin_size and maximum + args.bin_size, choosing one or the other is sufficient. * Change the binning back to numpy.arange just for the legacy, it doesn't matter whether you choose numpy.linspace or numpy.arange, unless you have only 1 element to use for binning. * No need to change what it originally said on that line, anyway. * I don't need to import from math anymore. Not using numpy.linspace method anymore. * Don't put new lines in | 17 November 2016, 20:21:13 UTC |
| abb6a6f | John Veitch | 17 November 2016, 19:34:10 UTC | Add note on MacOS installation of m2crypto in install instructions (#1250) * Add note on MacOS installation of m2crypto in install instructions * fix instruction | 17 November 2016, 19:34:10 UTC |
| 5dea72b | Christopher M. Biwer | 17 November 2016, 17:37:30 UTC | Allow pycbc_generate_hwinj to use --asd-file and --psd-file (#1255) * Interpolate PSD. * Skip strain reading if using PSD or ASD file. * More detailed log message. * Some PEP8. * Some PEP8. * More verbose messages. * Only check options if not using PSD/ASD file. PEP8. * Remove debug. * Use and not or. * Use zeroNoise. * Only interpolate once. * Change check. * Check that --psd-estimation is used with frame files. | 17 November 2016, 17:37:30 UTC |
| 57c23d9 | Alex Nitz | 17 November 2016, 16:26:50 UTC | pass errors through faithsim (#1253) * pass errors through faithsim * move errors to warning class | 17 November 2016, 16:26:50 UTC |
| 82c5aaa | Alex Nitz | 16 November 2016, 17:50:44 UTC | Read the template start frequency from the template bank (#1146) * start alpha6 flower or hdf file * read frequency start of waveforms from bank * update docs * Fix errors * update bank chisq for the change in the filterbank interface | 16 November 2016, 17:50:44 UTC |
| ca52bfc | Christopher M. Biwer | 16 November 2016, 14:57:40 UTC | Use multi-IFO options for hardware injection generation executable (#1245) * Add --filterbank-gain 1.0 since gain of filterbnk is 0.0 if no active injection. * Use multi-PSD options for hwinj generation. * Fix shebang line. * Remove commented line. | 16 November 2016, 14:57:40 UTC |
