https://github.com/GPflow/GPflow

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125846f Bump version to fix PyPI package 17 June 2019, 22:30 UTC
ae8970f Merge branch 'develop' of github.com:GPflow/GPflow into develop 17 June 2019, 21:03 UTC
804c1a0 Modify CircleCI config 17 June 2019, 18:19 UTC
cdcefff debugging 17 June 2019, 17:54 UTC
4440a73 debugging 17 June 2019, 17:34 UTC
653a80d Resurrect a couple of notebooks that went missing in #924 (#989) Closes #953. Adds a bunch of notebbooks deleted in #924 (0dec75) - mainly theoretical notes: * FITC vs VFE comparison * Sanity check of model overlap for Gaussian likelihood and Z=X * SGPR and VGP equation derivations * How to combine GPflow models with neural networks * Manipulating models 17 June 2019, 17:28 UTC
139f833 Debugging 17 June 2019, 17:26 UTC
a9aaeeb Merge branch 'develop' 17 June 2019, 16:37 UTC
ba5e53a Merge branch 'develop' of github.com:GPflow/GPflow into develop 17 June 2019, 16:33 UTC
6ab11a5 CircleCI pip package upload 17 June 2019, 16:33 UTC
c3a46bd VGP data update (#617) * Fix VGP build for updated dataholders * Keep user configured priors and transforms for VGP q parameters when changing X and Y 17 June 2019, 16:27 UTC
4b8cae1 Add IWAE DGP to the README.md (#983) 30 May 2019, 11:27 UTC
b8ed833 Change 1e-40 threshold to 1e-36 for sqrt distance operation. (#973) 14 May 2019, 14:10 UTC
549394f Varying noise notebook (#962) * first attempt at a notebook with known output noise * improved known-noise notebook * improvements to known-noise notebook * Changed notebook name, added much more commentary, improved links * correcting spelling and formatting errors * edits * rename * add varying_noise to intro.ipynb 05 April 2019, 16:53 UTC
cedbc86 Update README (#963) * make headline links more explanatory * add VBPP to projects * add link to kernel_learning project 03 April 2019, 18:51 UTC
5fcf8d9 SwitchedLikelihood workaround for #951 (#957) * test to reproduce #951 * fix #951 * Small note regarding fixing `num_latent` in the future. 28 March 2019, 11:59 UTC
0eb4b63 Added contributor to README.md (#954) 11 March 2019, 12:09 UTC
a78c46f Fixing bad docstrings in conditionals (#952) 07 March 2019, 17:10 UTC
cb34808 Notebook fixes (1/...): intro, tips_and_tricks, basics/ (#948) Proof-reading of notebooks: intro, tips_and_tricks, and basics/{regression, classification, GPLVM}. Fixes a few links and typos elsewhere. 06 March 2019, 17:21 UTC
062c697 GPflow glossary document (#923) 03 March 2019, 16:28 UTC
f376dc2 Fix `fully_correlated_conditional_repeat` shapes (#945) 01 March 2019, 20:57 UTC
7996cf7 Merge pull request #946 from GPflow/ayman/multioutput-notebook Clean up of multioutput notebook and link to other notebooks 25 February 2019, 11:28 UTC
dc7db32 Merge branch 'develop' into ayman/multioutput-notebook 25 February 2019, 11:06 UTC
8517439 gone over review and implmented changes 25 February 2019, 10:49 UTC
5ef8813 Added GPflows diagram to intro (and altered intro paragraph to explain what comes next) (#947) 20 February 2019, 17:36 UTC
8b14095 clean up of multioutput notebook and link to other notebooks 20 February 2019, 12:34 UTC
5f037b4 Fix intro.ipynb rendering in nbviewer 19 February 2019, 17:10 UTC
c2c8da2 Remove empty cell from intro.ipynb 19 February 2019, 17:02 UTC
d3a0a8e README cleaning 19 February 2019, 16:56 UTC
0dec75e Revamp of GPflow documentation and notebooks (#924) 19 February 2019, 16:37 UTC
649b039 Minor performance improvement: pass Cholesky of K to gauss_kl (#933) Add option to pass K_cholesky to kl_gauss 15 February 2019, 13:32 UTC
191a1c2 Broadcasting of conditionals (#895) 04 February 2019, 10:57 UTC
771de3e Minor changes to Tips & Tricks notebook (#921) * minor changes to tips_and_tricks notebook * add tips_and_tricks to docs * add doc/README.md 01 February 2019, 18:20 UTC
765224b Tips & Tricks notebooks changes (#916) 30 January 2019, 01:11 UTC
0bf75f7 Fix AutoBuild metaclass to not screw up method signatures (#907) The AutoBuild metaclass that is present in all Parameterized subclasses (e.g. models, kernels, likelihoods etc.) overwrote the `__init__` function and thereby replaced the signature with `*args, **kwargs`, which meant that the API documentation and command-line/IDE auto-completion was broken. This PR makes use of the "decorator" package (slightly hacked) to restore the original signatures (while allowing autobuild to still be passed as an additional keyword argument). 29 January 2019, 11:27 UTC
5166d0f Merge branch 'develop' of github.com:GPflow/GPflow into develop 29 January 2019, 08:16 UTC
c6805dc Change github template 29 January 2019, 08:16 UTC
35e58c4 Update README.md 28 January 2019, 22:11 UTC
c613302 Add references to documentation and tips & tricks in README. 28 January 2019, 21:31 UTC
f8fc156 Results of hackathon 28 January (#914) 28 January 2019, 18:13 UTC
1c74ce4 Hackathon doc cleanup (#906) * Release v1.3.0 (#869) * cleaning up some of the .rst files into a flatter hierarchy * editing upper bound notebook so that headers don't interfere with the doc structure * some eidts to the GPR docstring and call signature * imrpving kernel docstrings * improving SGPR call signature * simplifying use of abc.abstractmethod * reinstating a very important period * Update gpflow/kernels.py Co-Authored-By: jameshensman <james.hensman@gmail.com> * improvements for kernel docstrings * typo fix in gpflow/models/gpr.py Co-Authored-By: jameshensman <james.hensman@gmail.com> * typo fix in gpflow/models/sgpr.py Co-Authored-By: jameshensman <james.hensman@gmail.com> * more kernel docstring improvements * Added module level descriptions of likelihoods and kernels, fixed table in intro, and added auto-detection of modules with auto-members * Fixed minor typos in the docs * improving TOC by setting trtee depth to 2 * some copyright edits * Moved documentation from .rst to module level documentation * including missing argument in SGPR init * Added mean function module level documentation, changed to unicode from LaTeX for readability in code 28 January 2019, 17:13 UTC
7e55422 Typo "NOSET" -> "NOTSET" in gpflowrc (#911) The available Python logging levels are as written now in the file: https://docs.python.org/3/library/logging.html#levels 28 January 2019, 16:32 UTC
f78ade1 Privatize core methods (#908) * remove deprecated full_name (replaced by pathname) * rename a bunch of core methods to be private to clean up API docs 28 January 2019, 15:17 UTC
ba8b7a5 Update README to include local compilation of docs (#904) * Update README to include instructions for local compilation of docs 28 January 2019, 14:56 UTC
2696407 fix models maths documentation (#905) (#909) Some docstrings had \\ for LaTeX maths commands but had a r at the start, so they were escaped too much. One docstring was missing the r but had some single-\. Fixes those. 28 January 2019, 14:49 UTC
cc5693c Hotfix fully_correlated_conditional (#899) 09 January 2019, 17:25 UTC
57f4c14 Change github issue templates. 06 January 2019, 00:57 UTC
c43d3f5 Issue templates 06 January 2019, 00:46 UTC
d8fc9c1 CircleCI config. Add version to workflow 23 December 2018, 00:02 UTC
880c35d CircleCI status badge 22 December 2018, 23:49 UTC
27ff38c Add names to run commands for circleci 22 December 2018, 16:38 UTC
d5be4ee CircleCI instead of TravisCI (#892) 21 December 2018, 13:15 UTC
7f0cac1 Configure travis to work with jobs (#888) 03 December 2018, 00:36 UTC
856193d Travis configuration. Remove pip -y option 02 December 2018, 08:53 UTC
132a194 Create conda env with yes option 02 December 2018, 08:43 UTC
44090f2 PIP install with auto yes 02 December 2018, 08:28 UTC
0bc4b16 Travis configuration (#887) 02 December 2018, 00:50 UTC
fdb8efb Support TensorFlow 1.12 (#877) 28 November 2018, 19:37 UTC
18fa159 Debug Travis 24 November 2018, 22:56 UTC
0ab60c3 Debug Travis 24 November 2018, 22:42 UTC
66f5287 Remove printing in travis.sh 24 November 2018, 12:12 UTC
62132f8 Print travis information 24 November 2018, 12:05 UTC
6b4a3ab Add travis script 24 November 2018, 00:21 UTC
84abb1d Merge branch 'develop' of github.com:GPflow/GPflow into develop 23 November 2018, 16:43 UTC
5616e65 Travis script (#884) * Travis script for running notebook tests only in develop and master branches. 23 November 2018, 14:11 UTC
cada28a Merge branch 'develop' of github.com:GPflow/GPflow into develop 22 November 2018, 17:43 UTC
14423f0 Compute SGPR qu's autoflow method (#879) 14 November 2018, 20:53 UTC
9562b9b Merge branch 'develop' of github.com:GPflow/GPflow into develop 14 November 2018, 14:20 UTC
abd8587 Remove `.fixed` property from Parameter class. (#873) 06 November 2018, 14:03 UTC
0c3e151 Resolve merge conflict. 19 October 2018, 16:42 UTC
703ccb1 Merge branch 'develop' of github.com:GPflow/GPflow into develop 19 October 2018, 16:42 UTC
fe82d3f Release version 1.3.0 (#870) 19 October 2018, 16:38 UTC
377ff5f Merge branch 'develop' of github.com:GPflow/GPflow into develop 19 October 2018, 16:05 UTC
9587e10 Change release version to 1.3.0 19 October 2018, 15:32 UTC
80f6d6f Release v1.3.0 (#869) 19 October 2018, 13:20 UTC
63975b1 Release notes 1.3.0 (#868) 19 October 2018, 12:44 UTC
120b128 Update RELEASE.md 19 October 2018, 11:05 UTC
1707d7b Merge branch 'develop' of github.com:GPflow/GPflow into develop 06 October 2018, 18:12 UTC
3935d6b Merge pull request #854 from GPflow/hughsalimbeni-patch-1 added link to orthogonally decoupled repo 28 September 2018, 16:00 UTC
185cc8f Merge branch 'develop' into hughsalimbeni-patch-1 27 September 2018, 10:14 UTC
e8ba02e Fixing the problem with monitoring ScipyOptimizer (#856) Now lets the monitor context keep track of the optimiser to update optimiser's variables - necessary for obtaining correct traces (of hyperparameters, log-marginal likelihoods etc.) when using ScipyOptimizer. 27 September 2018, 10:14 UTC
f8deb4c clean up GPR docstrings (#859) 27 September 2018, 09:24 UTC
1196600 Merge branch 'develop' of github.com:GPflow/GPflow into develop 20 September 2018, 10:34 UTC
bb3d1f4 Clean up notebooks and documentation (#849) Minor code changes: - adds rich representation to Parameter(ized) objects so `m.as_pandas_table()` can be replaced by `m` for pretty-printing in jupyter notebooks - updates priors to have prettier printing (and more value checks) Notebooks - coreg_demo.ipynb: clean-up, typo fixes - models.ipynb: clean-up, now actually consistent with current (gpflow-1.0) architecture - kernels.ipynb: clean-up Documentation - updates various links in README.md (JH's webpage, readthedocs, tensorflow installation) - adds all currently existing notebooks to the documentation (under new section "advanced tutorials") Stand-alone .py demo scripts in doc/source/notebooks/ - makes them runnable with current gpflow version - adds "unmaintained" warning header 19 September 2018, 13:48 UTC
2a16f04 added link to orthogonally decoupled repo pending arxiv/nips 2018 publication 16 September 2018, 16:30 UTC
83631b7 Update docs_require.txt to supported tensorflow version (#853) 14 September 2018, 16:01 UTC
b94500b Merge branch 'develop' of github.com:GPflow/GPflow into develop 14 September 2018, 15:35 UTC
fa20322 Docs use supported tensorflow version 14 September 2018, 15:34 UTC
460afc7 Sample conditional returns mean and var as well as samples, and generates more than one sample (#836) 12 September 2018, 19:01 UTC
dc0b987 Merge branch 'develop' of github.com:GPflow/GPflow into develop 09 September 2018, 22:18 UTC
c8b86d3 New line in docstrings of Stationary kernels 09 September 2018, 22:18 UTC
2475891 fix active_dims=slice (#840) Fixes #839 05 September 2018, 15:12 UTC
12c7656 add link to github.com/Joshuaalbert/heterogp in lieu of #735 (#773) * add link to github.com/Joshuaalbert/heterogp in lieu of #735 * remove link to gpflow-monitor now that it's in GPflow itself, ok'd by @markvdw 31 August 2018, 17:57 UTC
a2afcee RBF Cross-Covariance (#754) Adds RBF cross covariance in expectations. Previous implementation defaulted to quadrature expectations for cross co-variance when kernel and feature were not the same. 30 August 2018, 09:23 UTC
0f6a5d3 Added MixedKernelSeparateMof (#830) Adds a new feature MixedKernelSeparateMof (SharedIndependentMof subclass) for the most efficient code together with SeparateMixedMok. 29 August 2018, 22:11 UTC
fd6beaa Support broadcasting (#829) Modifies the kernels and conditionals to support broadcasting over (arbitrarily many) extra leading dimensions, similar to most of the tensorflow ops. So e.g. kern.K(X) now supports X being shape `[S, ..., T, N, D]`, and returns `[S, ..., T, N, N]` 22 August 2018, 14:13 UTC
af89b6d Cleaning up stationary kernel implementations (#827) Stationary kernels are now implemented by K_r2 as a function of the scaled square distance or K_r as a function of the scaled Euclidean distance, see the docstrings for details. scaled_square_dist and scaled_euclid_dist are deprecated, and square_dist and euclid_dist are removed. RBF is now an alias for SquaredExponential. 22 August 2018, 10:26 UTC
51e17ae Merge branch 'master' of http://github.com/GPflow/GPflow into develop 17 August 2018, 21:00 UTC
2c4cf39 Adding widedeepnetworks repository link (#825) * Adding repository link * Correction to table 17 August 2018, 19:05 UTC
66aa1f9 Extended ndiagquad docstrings (#823) 16 August 2018, 10:30 UTC
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