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https://github.com/pierre-guillou/pdiags_bench
13 February 2023, 11:53:21 UTC
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RevisionAuthorDateMessageCommit Date
b422e92 Pierre Guillou05 March 2021, 13:57:05 UTCWiP09 March 2021, 14:33:19 UTC
5bb38a0 Pierre Guillou05 March 2021, 15:32:36 UTCSimpler Dipha regex08 March 2021, 13:51:24 UTC
c4cd6cf Pierre Guillou05 March 2021, 12:47:09 UTCDon't prepare datasets during run08 March 2021, 13:51:24 UTC
ed94e9b Pierre Guillou04 March 2021, 16:59:47 UTCMeSU special08 March 2021, 13:51:24 UTC
9adecfb Pierre Guillou08 March 2021, 11:44:39 UTCAdd script to generate a LaTeX array from JSON results08 March 2021, 13:51:24 UTC
fd4941e Pierre Guillou04 March 2021, 13:52:52 UTC[main] Fix Gudhi, CubicalRipser results display04 March 2021, 14:49:28 UTC
d546dee Pierre Guillou04 March 2021, 13:02:20 UTC[main] Fix Gudhi output file04 March 2021, 13:02:20 UTC
663ddc3 Pierre Guillou04 March 2021, 10:53:18 UTC[main] Target raws subdirectory04 March 2021, 10:55:49 UTC
ef8e905 Pierre Guillou04 March 2021, 10:51:29 UTC[convert_datasets] Don't export a VTI04 March 2021, 10:51:29 UTC
8a41361 Pierre Guillou04 March 2021, 10:45:26 UTC[main] Re-enable Gudhi, CubicalRipser04 March 2021, 10:45:26 UTC
8af8098 Pierre Guillou04 March 2021, 10:45:06 UTC[convert_datasets] Re-enable implicit output for Gudhi/CubicalRipser04 March 2021, 10:45:06 UTC
187ac8e Pierre Guillou02 March 2021, 17:16:29 UTC[main] Also export number of threads02 March 2021, 17:16:29 UTC
02a4ada Pierre Guillou02 March 2021, 16:53:39 UTC[main] Expand exported metadata02 March 2021, 16:58:39 UTC
cf54d74 Pierre Guillou02 March 2021, 15:37:29 UTCRevert "Wip" This reverts commit 7ca51b02ba0be48b1e9dd145145bc431917d21fd.02 March 2021, 15:38:43 UTC
ba571d9 Pierre Guillou02 March 2021, 10:44:20 UTC[main] Factor printing pairs02 March 2021, 10:44:20 UTC
3202efb Pierre Guillou01 March 2021, 21:17:53 UTC[main] Use compare_diags to directly read TTK diagrams01 March 2021, 21:17:53 UTC
6dce24f Pierre Guillou01 March 2021, 21:17:41 UTC[main] Support hybrid++ mode01 March 2021, 21:17:41 UTC
7ca51b0 Pierre Guillou26 February 2021, 10:12:33 UTCWip01 March 2021, 15:17:51 UTC
5fa8aff Pierre Guillou23 February 2021, 14:57:22 UTCAdd guide to build TTK on MeSU01 March 2021, 15:17:51 UTC
3dbf015 Pierre Guillou23 February 2021, 10:51:34 UTC[build_instr] Don't forget Kamikaze mode23 February 2021, 10:51:34 UTC
68b6696 Pierre Guillou23 February 2021, 10:50:06 UTC[pbs] Log into specific files23 February 2021, 10:50:06 UTC
125f954 Pierre Guillou22 February 2021, 16:18:58 UTC[pbs] Also compute in hybrid mode22 February 2021, 16:18:58 UTC
4140f9e Pierre Guillou22 February 2021, 15:06:49 UTC[pbs] Disable Dipha benchmark mode22 February 2021, 15:06:49 UTC
4043a0c Pierre Guillou22 February 2021, 14:29:54 UTC[pbs] Use PBS-provided env variables for thread number22 February 2021, 14:29:54 UTC
2b9c1ea Pierre Guillou22 February 2021, 11:00:01 UTC[pbs] Remove temporary dataset files22 February 2021, 11:00:01 UTC
367060a Pierre Guillou19 February 2021, 20:48:46 UTCRevert "Add wrapper around TTK diagram computation to export a Dipha explicit grid" This reverts commit 1f8e867e007968a5dac1d2b066b26bfc4137ce51.19 February 2021, 20:48:46 UTC
f8af508 Pierre Guillou19 February 2021, 20:44:51 UTC[pbs] Export to Dipha19 February 2021, 20:44:51 UTC
0cd89a0 Pierre Guillou19 February 2021, 20:44:41 UTCRevert "[pbs] Use python script to compute diagram" This reverts commit bf8b7622c4dd474d32c2e04b2ad4af42e66e3fb5.19 February 2021, 20:44:41 UTC
bf8b762 Pierre Guillou19 February 2021, 19:56:21 UTC[pbs] Use python script to compute diagram19 February 2021, 20:06:00 UTC
ff2c76a Pierre Guillou19 February 2021, 19:55:39 UTC[build_instr] Don't forget CPU architecture19 February 2021, 19:56:54 UTC
7b50d90 Pierre Guillou19 February 2021, 17:05:46 UTC[pbs] Merge loops19 February 2021, 19:56:54 UTC
f89cfe7 Pierre Guillou19 February 2021, 16:56:53 UTC[convert_datasets] WiP Don't export explicit grid to Dipha19 February 2021, 19:56:54 UTC
1f8e867 Pierre Guillou19 February 2021, 15:50:31 UTCAdd wrapper around TTK diagram computation to export a Dipha explicit grid19 February 2021, 19:56:54 UTC
203dce3 Pierre Guillou19 February 2021, 14:24:11 UTC[convert_datasets] Only compute order field19 February 2021, 17:32:45 UTC
a00b566 Pierre Guillou19 February 2021, 13:40:35 UTC[pbs] Log19 February 2021, 16:58:29 UTC
c715789 Pierre Guillou19 February 2021, 13:32:31 UTC[pbs] Raise the walltime19 February 2021, 13:32:31 UTC
8ec2edb Pierre Guillou19 February 2021, 13:26:34 UTC[pbs] Factor thread number19 February 2021, 13:26:34 UTC
2d93541 Pierre Guillou19 February 2021, 13:24:04 UTC[pbs] Loop over all datasets from raws19 February 2021, 13:26:05 UTC
25ac816 Pierre Guillou19 February 2021, 11:54:28 UTC[pbs] Load mpt before OpenMPI?19 February 2021, 11:57:55 UTC
33028b1 Pierre Guillou19 February 2021, 11:47:59 UTC[pbs] Try Dipha and TTK computation19 February 2021, 11:47:59 UTC
41bd3fb Pierre Guillou18 February 2021, 17:31:05 UTC[pbs] Back to Dipha on alpha18 February 2021, 17:43:06 UTC
874583b Pierre Guillou18 February 2021, 17:19:01 UTCAdd MeSU build instructions18 February 2021, 17:43:06 UTC
1102a36 Pierre Guillou18 February 2021, 17:04:57 UTCWorking TTK launch script for MeSU18 February 2021, 17:43:06 UTC
2516b21 Pierre Guillou18 February 2021, 14:19:51 UTCWorking Dipha launch script for MeSU18 February 2021, 17:43:06 UTC
a6cf696 Pierre Guillou17 February 2021, 14:15:18 UTCFix pbs script17 February 2021, 16:56:46 UTC
6d06522 Pierre Guillou17 February 2021, 13:04:11 UTC[main] Read on disk17 February 2021, 16:56:46 UTC
4a87419 Pierre Guillou17 February 2021, 12:07:57 UTC[dipha_explicit] Fix entry point17 February 2021, 16:56:46 UTC
32c0ec1 Pierre Guillou17 February 2021, 11:01:20 UTC[main] Add sequential mode17 February 2021, 16:56:46 UTC
5d7f215 Pierre Guillou16 February 2021, 19:05:52 UTC[main] Don't fail with missing softs16 February 2021, 19:38:32 UTC
9ddcf49 Pierre Guillou16 February 2021, 14:37:13 UTC[main] Support TTK offloading to Dipha16 February 2021, 19:38:32 UTC
7042dc0 Pierre Guillou16 February 2021, 13:59:35 UTC[convert_datasets] Only generate explicit TTK + Dipha datasets16 February 2021, 14:48:03 UTC
7b41c48 Pierre Guillou16 February 2021, 13:47:21 UTC[main] Outsource datasets conversion to a separate source file16 February 2021, 14:48:03 UTC
654903b Pierre Guillou16 February 2021, 13:22:20 UTC[compare_diags] Print diff no matter what16 February 2021, 14:48:03 UTC
c52d529 Pierre Guillou16 February 2021, 13:22:02 UTC[test_random] WiP test Dipha vs TTK diagrams16 February 2021, 14:48:03 UTC
cef1b5e Pierre Guillou16 February 2021, 13:20:52 UTC[test_random] Support random seed16 February 2021, 14:48:03 UTC
f076943 Pierre Guillou15 February 2021, 15:42:27 UTCAdd PBS script for mesu15 February 2021, 15:42:27 UTC
0564e3b Pierre Guillou15 February 2021, 13:46:16 UTC[main] Remove network ops to not depend on requests15 February 2021, 13:47:02 UTC
2eaa925 Pierre Guillou12 February 2021, 15:50:13 UTC[dipha_explicit] Extract functions, rework boundary matrix display15 February 2021, 13:47:02 UTC
6fbbd1c Pierre Guillou22 January 2021, 15:16:13 UTC[compare_diags] Display diff when passing file names15 February 2021, 09:41:45 UTC
d257036 Pierre Guillou09 February 2021, 13:12:33 UTC[dipha_explicit] Generate a toy example09 February 2021, 13:14:55 UTC
eff1ddd Pierre Guillou09 February 2021, 13:13:26 UTC[dipha_explicit] Display the whole boundary matrix09 February 2021, 13:14:55 UTC
ed3fe54 Pierre Guillou09 February 2021, 13:14:07 UTC[nx] Only display input graph09 February 2021, 13:14:55 UTC
b3760ff Pierre Guillou18 January 2021, 10:38:29 UTC[compare_diags] Use difflib and compare births/deaths coordinates18 January 2021, 11:53:10 UTC
19a490f Pierre Guillou14 January 2021, 20:41:56 UTC[test_random] Don't normalize order field14 January 2021, 20:41:56 UTC
817d990 Pierre Guillou14 January 2021, 18:26:57 UTCAdd test_random script14 January 2021, 18:26:57 UTC
17a783f Pierre Guillou14 January 2021, 17:44:23 UTC[gen_random] Refactor into function14 January 2021, 17:44:23 UTC
b6abc8d Pierre Guillou14 January 2021, 15:40:35 UTCSegregate by diagram type14 January 2021, 17:30:31 UTC
d135b4f Pierre Guillou14 January 2021, 14:16:05 UTCAdd script to compare Dipha and TTK diagrams on explicit meshes14 January 2021, 14:43:30 UTC
ff9e07d Pierre Guillou13 January 2021, 13:11:16 UTCAlso generate elevation fields13 January 2021, 13:13:48 UTC
8d0974e Pierre Guillou13 January 2021, 11:21:49 UTCWarning--13 January 2021, 11:21:49 UTC
8421c4e Pierre Guillou12 January 2021, 18:45:10 UTCProduce explicit and implicit grids13 January 2021, 11:21:12 UTC
26ec185 Pierre Guillou12 January 2021, 18:34:37 UTCRefactor diagram computation12 January 2021, 19:09:29 UTC
7935d13 Pierre Guillou12 January 2021, 16:02:03 UTCPass cube edge to generate random cube12 January 2021, 16:02:03 UTC
9558cc7 Pierre Guillou12 January 2021, 12:34:33 UTCAlso compute order field12 January 2021, 12:34:33 UTC
f39cc62 Pierre Guillou12 January 2021, 12:04:41 UTCDon't download datasets by default12 January 2021, 12:04:41 UTC
b347245 Pierre Guillou12 January 2021, 11:16:31 UTCSave datasets in another directory12 January 2021, 11:16:31 UTC
6a57936 Pierre Guillou12 January 2021, 11:04:48 UTCFactor directory creation12 January 2021, 11:04:48 UTC
880c6d3 Pierre Guillou12 January 2021, 11:00:59 UTCGenerate Dipha explicit complexes and VTUs12 January 2021, 11:00:59 UTC
628ec22 Pierre Guillou11 January 2021, 17:38:28 UTCUse updated Dipha Reader11 January 2021, 17:38:28 UTC
d4b1fc3 Pierre Guillou11 January 2021, 17:38:08 UTCAdd test file for Dipha Explicit Complexes11 January 2021, 17:38:08 UTC
2b105c3 Pierre Guillou11 January 2021, 15:22:02 UTCWiP Test Dipha with random perturbation11 January 2021, 15:22:47 UTC
b606f40 Pierre Guillou11 January 2021, 11:36:25 UTCTest w/o order, sfnorm11 January 2021, 15:22:47 UTC
9aa2cbb Pierre Guillou09 January 2021, 15:50:08 UTCStill normalize scalar field11 January 2021, 15:22:47 UTC
ea50324 Pierre Guillou07 January 2021, 15:41:34 UTCCompute diagrams on order arrays11 January 2021, 15:22:47 UTC
2cf59fa Pierre Guillou07 January 2021, 20:09:57 UTCOnly compare TTK and Dipha11 January 2021, 15:22:47 UTC
41aa1d6 Pierre Guillou07 January 2021, 16:25:06 UTCPrint number of TTK pairs/critical cells11 January 2021, 15:22:47 UTC
da1245a Pierre Guillou07 January 2021, 15:01:10 UTCSet threshold to 1%11 January 2021, 15:22:47 UTC
1984a4a Pierre Guillou17 December 2020, 15:44:41 UTCCapture TTK and Dipha computation times without overhead17 December 2020, 17:00:07 UTC
c9acf15 Pierre Guillou14 December 2020, 20:33:00 UTCSilicium17 December 2020, 15:46:08 UTC
69bdad6 Pierre Guillou10 December 2020, 20:36:03 UTCAdd Python script to generate random data on uniform grid17 December 2020, 15:46:08 UTC
5466ebf Pierre Guillou04 December 2020, 18:53:26 UTCMore paths04 December 2020, 18:53:26 UTC
26f7abf Pierre Guillou04 December 2020, 11:35:42 UTCGraph is bipartite04 December 2020, 11:35:42 UTC
2f7ffd5 Pierre Guillou04 December 2020, 11:34:59 UTCImprove graph stats04 December 2020, 11:34:59 UTC
9c18e02 Pierre Guillou03 December 2020, 10:43:33 UTCTooth 16003 December 2020, 10:48:42 UTC
67ac459 Pierre Guillou02 December 2020, 22:05:10 UTCTooth 6003 December 2020, 10:48:42 UTC
498fafa Pierre Guillou02 December 2020, 09:31:42 UTCTooth 10003 December 2020, 10:48:42 UTC
0f55a88 Pierre Guillou01 December 2020, 12:42:43 UTCAdd script to analyze (saddle-saddle) networks03 December 2020, 10:48:42 UTC
3368f89 Pierre Guillou20 November 2020, 17:02:28 UTCSkip checking for TTK executable20 November 2020, 17:02:28 UTC
882ef5f Pierre Guillou20 November 2020, 16:48:09 UTCAlso display the number of Dipha critical points20 November 2020, 16:48:09 UTC
384663c Pierre Guillou20 November 2020, 14:15:59 UTCPrint TTK pairs stats20 November 2020, 14:40:23 UTC
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