swh:1:snp:5789d5563ae0ff1fac9d4620526a6e02863df326
Tip revision: e86acd0d7ec14eaba9a500b0d7e33aa5446027c6 authored by Thomas Mooney on 03 January 2013, 19:26:11 UTC
Use Picard to convert the merged BAM into two FASTQs directly.
Use Picard to convert the merged BAM into two FASTQs directly.
Tip revision: e86acd0
| File | Mode | Size |
|---|---|---|
| Capture | ||
| Command | ||
| DataSource | ||
| Db | ||
| Disk | ||
| DruggableGene | ||
| Env | ||
| FeatureList | ||
| File | ||
| Individual | ||
| Info | ||
| InlineConfig32 | ||
| InlineConfig64 | ||
| InstrumentData | ||
| Library | ||
| MiscNote | ||
| Model | ||
| ModelGroup | ||
| Nomenclature | ||
| Notable | ||
| Observers | ||
| PopulationGroup | ||
| Prediction | ||
| ProcessingProfile | ||
| Project | ||
| ProjectPart | ||
| Report | ||
| Role | ||
| Sample | ||
| Search | ||
| Site | ||
| SoftwareResult | ||
| Subject | ||
| SubjectAttribute | ||
| Sys | ||
| Task | ||
| Taxon | ||
| Utility | ||
| View | ||
| Wiki | ||
| WorkOrder | ||
| WorkOrderItem | ||
| xsl | ||
| Command.pm | -rwxr-xr-x | 1.3 KB |
| Command.pm.opts | -rw-r--r-- | 626.7 KB |
| CommandLine.pm | -rwxr-xr-x | 1.1 KB |
| Db.pm | -rw-r--r-- | 135 bytes |
| Disease.pm | -rw-r--r-- | 905 bytes |
| DruggableGene.pm | -rw-r--r-- | 136 bytes |
| Env.pm | -rw-r--r-- | 1.9 KB |
| ExternalGeneId.pm | -rw-r--r-- | 1.1 KB |
| FeatureList.pm | -rw-r--r-- | 13.0 KB |
| FeatureList.t | -rw-r--r-- | 4.0 KB |
| FeatureList.t.d | l--------- | 65 bytes |
| Gene.pm | -rw-r--r-- | 4.9 KB |
| GoResult.pm | -rw-r--r-- | 810 bytes |
| Individual.pm | -rw-r--r-- | 4.2 KB |
| Individual.t | -rwxr-xr-x | 1.2 KB |
| InlineConfig.pm | -rw-r--r-- | 669 bytes |
| InstrumentData.pm | -rw-r--r-- | 14.0 KB |
| InstrumentData.t | -rw-r--r-- | 2.0 KB |
| InstrumentDataAttribute.pm | -rw-r--r-- | 1.6 KB |
| InterproResult.pm | -rw-r--r-- | 1.1 KB |
| Library.pm | -rw-r--r-- | 2.7 KB |
| Library.t | -rw-r--r-- | 1.1 KB |
| Memcache.pm | -rw-r--r-- | 1.1 KB |
| Memcache.t | -rw-r--r-- | 495 bytes |
| MiscAttribute.pm | -rw-r--r-- | 1.1 KB |
| MiscAttribute.t | -rw-r--r-- | 835 bytes |
| MiscNote.pm | -rw-r--r-- | 2.1 KB |
| MiscNote.t | -rw-r--r-- | 3.3 KB |
| Model-build_requested.t | -rw-r--r-- | 2.0 KB |
| Model-downstream_build.t | -rw-r--r-- | 2.6 KB |
| Model-limit_inputs_rule.t | -rw-r--r-- | 3.0 KB |
| Model-to_from_models.t | -rw-r--r-- | 1.6 KB |
| Model.pm | -rw-r--r-- | 30.7 KB |
| Model.t | -rw-r--r-- | 9.5 KB |
| ModelDeprecated.pm | -rw-r--r-- | 24.4 KB |
| ModelGroup-infer-subject.t | -rw-r--r-- | 4.1 KB |
| ModelGroup.pm | -rw-r--r-- | 10.8 KB |
| ModelGroup.t | -rwxr-xr-x | 6.1 KB |
| ModelGroupBridge.pm | -rw-r--r-- | 1.5 KB |
| Nomenclature.pm | -rw-r--r-- | 5.5 KB |
| Notable.pm | -rw-r--r-- | 310 bytes |
| Notable.t | -rw-r--r-- | 1.4 KB |
| Observers.pm | -rw-r--r-- | 916 bytes |
| PopulationGroup.pm | -rw-r--r-- | 7.2 KB |
| PopulationGroup.t | -rw-r--r-- | 2.4 KB |
| ProcessingProfile-create-delete.t | -rw-r--r-- | 1.4 KB |
| ProcessingProfile-example1.t | -rw-r--r-- | 4.0 KB |
| ProcessingProfile.pm | -rw-r--r-- | 12.3 KB |
| Project.pm | -rw-r--r-- | 5.9 KB |
| Project.t | -rwxr-xr-x | 4.0 KB |
| ProjectPart.pm | -rw-r--r-- | 2.0 KB |
| Protein.pm | -rw-r--r-- | 1.7 KB |
| Report.pm | -rw-r--r-- | 10.3 KB |
| Report.t | -rw-r--r-- | 3.4 KB |
| SNVManualReview.pm | -rw-r--r-- | 1.5 KB |
| Sample-add_default_genotype.t | -rw-r--r-- | 6.3 KB |
| Sample.pm | -rw-r--r-- | 13.3 KB |
| Sample.t | -rwxr-xr-x | 1.2 KB |
| SampleSource.pm | -rw-r--r-- | 627 bytes |
| Search.pm | -rw-r--r-- | 18.7 KB |
| Search.t | -rw-r--r-- | 3.0 KB |
| Searchable.pm | -rw-r--r-- | 260 bytes |
| SequenceDiff.pm | -rw-r--r-- | 692 bytes |
| SequenceDiffEval.pm | -rw-r--r-- | 767 bytes |
| SequenceDiffPart.pm | -rw-r--r-- | 1.3 KB |
| Site.pm | -rw-r--r-- | 1.6 KB |
| SoftwareResult.pm | -rw-r--r-- | 29.4 KB |
| SoftwareResult.t | -rwxr-xr-x | 4.8 KB |
| SoftwareResult_ambiguous_property_definitions.t | -rw-r--r-- | 2.0 KB |
| SoftwareResult_lock_naming.t | -rw-r--r-- | 1.4 KB |
| Statistics.pm | -rw-r--r-- | 4.6 KB |
| Statistics.t | -rw-r--r-- | 202 bytes |
| Subject-get_source.t | -rw-r--r-- | 2.8 KB |
| Subject.pm | -rw-r--r-- | 4.8 KB |
| Subject.t | -rw-r--r-- | 624 bytes |
| SubjectAttribute.pm | -rw-r--r-- | 2.4 KB |
| Sys-copy_directory.t | -rw-r--r-- | 1.7 KB |
| Sys-tar.t | -rw-r--r-- | 1.9 KB |
| Sys.pm | -rw-r--r-- | 34.7 KB |
| Sys.t | -rw-r--r-- | 4.3 KB |
| Task.pm | -rw-r--r-- | 6.4 KB |
| Task.t | -rw-r--r-- | 1.1 KB |
| Taxon.pm | -rw-r--r-- | 5.9 KB |
| Taxon.t | -rwxr-xr-x | 1.2 KB |
| Transcript.pm | -rw-r--r-- | 29.8 KB |
| Transcript.t | -rw-r--r-- | 2.4 KB |
| TranscriptCodingSequence.pm | -rw-r--r-- | 511 bytes |
| TranscriptStructure.pm | -rw-r--r-- | 23.4 KB |
| TranscriptStructure.t | -rw-r--r-- | 236 bytes |
| UpdateHistory.pm | -rw-r--r-- | 1.3 KB |
| VRList.pm | -rw-r--r-- | 1.2 KB |
| VRListMember.pm | -rw-r--r-- | 741 bytes |
| VariantOccurrence.pm | -rw-r--r-- | 1.6 KB |
| VariantReviewDetail.pm | -rw-r--r-- | 2.0 KB |
| VariantReviewDetailOld.pm | -rw-r--r-- | 2.7 KB |
| VariantReviewList.pm | -rw-r--r-- | 931 bytes |
| VariantReviewListFilter.pm | -rw-r--r-- | 438 bytes |
| VariantReviewListMember.pm | -rw-r--r-- | 613 bytes |
| Vocabulary.pm | -rw-r--r-- | 317 bytes |
| WorkOrder.pm | -rw-r--r-- | 2.9 KB |
| WorkOrder.t | -rw-r--r-- | 755 bytes |
| WorkOrderItem.pm | -rw-r--r-- | 7.4 KB |
| WorkOrderItem.t | -rw-r--r-- | 2.9 KB |
| processing_profile_subclassing.t | -rw-r--r-- | 4.5 KB |
| shellcmd.t | -rw-r--r-- | 1.1 KB |
