| 8720036 | Timo Heister | 01 June 2014, 18:32:47 UTC | improve documentation | 01 June 2014, 18:53:33 UTC |
| d6e745c | Timo Heister | 01 June 2014, 17:45:13 UTC | adiabatic InitialProfile will only run once now | 01 June 2014, 18:53:23 UTC |
| b872a6c | Timo Heister | 01 June 2014, 16:43:11 UTC | only initialize adiabatic_conditions once | 01 June 2014, 18:53:20 UTC |
| 0d715e1 | Timo Heister | 01 June 2014, 16:34:59 UTC | use the official initialize() | 01 June 2014, 18:53:17 UTC |
| cd4d977 | Timo Heister | 01 June 2014, 16:11:10 UTC | call initialize for termination criteria | 01 June 2014, 18:53:14 UTC |
| 2450610 | Timo Heister | 01 June 2014, 15:49:18 UTC | leave a todo | 01 June 2014, 18:53:11 UTC |
| 67092a9 | Timo Heister | 01 June 2014, 15:43:54 UTC | initialize() cleanup Now all plugin interfaces have an initialize() function that will be called *after* SimulatorAccess is available. | 01 June 2014, 18:53:05 UTC |
| 38ae063 | Timo Heister | 31 May 2014, 23:51:24 UTC | initialize needs to be a virtual function | 01 June 2014, 18:40:12 UTC |
| 5976720 | Rene Gassmoeller | 31 May 2014, 18:40:40 UTC | Updated changes.h according to last pull requests. | 31 May 2014, 23:15:10 UTC |
| df4f3be | Timo Heister | 30 May 2014, 22:36:37 UTC | release task: update manual | 30 May 2014, 22:36:37 UTC |
| 5936224 | Timo Heister | 30 May 2014, 22:32:11 UTC | release task: remove table model | 30 May 2014, 22:32:11 UTC |
| 962b567 | Timo Heister | 30 May 2014, 22:29:52 UTC | release task: update version info | 30 May 2014, 22:29:52 UTC |
| 63e930e | Timo Heister | 30 May 2014, 22:28:58 UTC | update release tasks | 30 May 2014, 22:28:58 UTC |
| c103877 | Timo Heister | 30 May 2014, 22:28:11 UTC | Merge pull request #111 from bangerth/fix-manual Fix manual | 30 May 2014, 22:28:11 UTC |
| 3240ae9 | Timo Heister | 30 May 2014, 22:26:48 UTC | release task: update version and changes.h | 30 May 2014, 22:26:48 UTC |
| 132a4cc | Timo Heister | 30 May 2014, 22:25:50 UTC | doxygen formatting, astyle, comment wrapping | 30 May 2014, 22:25:50 UTC |
| 3967b29 | Wolfgang Bangerth | 30 May 2014, 22:25:25 UTC | Remove 'frame=single' from two lstlisting environments since this is already the default. | 30 May 2014, 22:25:25 UTC |
| 1a31a0e | Wolfgang Bangerth | 30 May 2014, 22:24:45 UTC | Make sure the comment settings only apply to prmfile listings -- because we output run time percentages in some of the listing boxes which do not look nice in the manual if percent is a comment sign. | 30 May 2014, 22:24:45 UTC |
| d3f82a1 | Timo Heister | 30 May 2014, 22:18:08 UTC | Merge pull request #110 from tjhei/cmake_improvements Count number of tests correctly | 30 May 2014, 22:18:08 UTC |
| a53cb01 | Timo Heister | 30 May 2014, 21:22:35 UTC | Count number of tests correctly also reindent code | 30 May 2014, 22:06:36 UTC |
| b926900 | Timo Heister | 30 May 2014, 21:54:45 UTC | split tests because PETSc and Trilinos now produce different output | 30 May 2014, 21:55:59 UTC |
| c938b1b | Timo Heister | 30 May 2014, 21:32:16 UTC | add a test for the direct parallel PETSc solver which is using MUMPS right now. | 30 May 2014, 21:40:17 UTC |
| 4dfe3d1 | Timo Heister | 30 May 2014, 21:22:04 UTC | fix petsc test | 30 May 2014, 21:22:04 UTC |
| dd32421 | Timo Heister | 30 May 2014, 19:53:22 UTC | fix test output again | 30 May 2014, 19:53:22 UTC |
| a4e05a0 | Timo Heister | 30 May 2014, 19:37:16 UTC | fix new residual computation | 30 May 2014, 19:37:16 UTC |
| 012398f | Wolfgang Bangerth | 30 May 2014, 19:15:00 UTC | Merge pull request #109 from tjhei/linear_solver_tolerance Linear solver tolerance | 30 May 2014, 19:15:00 UTC |
| e005cdb | Timo Heister | 30 May 2014, 19:11:10 UTC | update tolerance parameter description | 30 May 2014, 19:11:50 UTC |
| e815b80 | Timo Heister | 30 May 2014, 17:56:37 UTC | adjust linear solver tolerance for some cookbooks | 30 May 2014, 19:02:32 UTC |
| e74beaa | Timo Heister | 30 May 2014, 17:54:29 UTC | update changelog | 30 May 2014, 19:02:32 UTC |
| 97786dc | Timo Heister | 30 May 2014, 16:16:08 UTC | update test output | 30 May 2014, 19:02:32 UTC |
| 966281e | Timo Heister | 30 May 2014, 16:13:18 UTC | rework linear solver tolerance Change the Stokes linear solver tolerance to inlcude the current pressure instead of only the rhs. In the past the formula for the Stokes solver tolerance was: rhs.l2_norm() * parameters.linear_stokes_solver_tolerance This causes problems if the magnitude of the rhs is large (for example due to a large gravity vector) and if the current pressure solves the problem fairly well (so the initial residual is much smaller than the tolerance as defined above). This is basically caused by the static pressure being a good solution. The new formula is: || B^T p_0 - G || * parameters.linear_stokes_solver_tolerance This fixes the problem that one had to use a linear solver tolerance of 1e-15 to make convection_box.prm work. | 30 May 2014, 19:02:28 UTC |
| d5911b0 | Timo Heister | 30 May 2014, 05:33:12 UTC | fix test outputs A couple of tests changed slightly due to a different quadrature order used in the KellyEstimator. | 30 May 2014, 05:33:12 UTC |
| 11706af | Timo Heister | 30 May 2014, 05:32:36 UTC | tests: numdiff should treat comma as a separator This fixes parsing number of the form "Errors u_L1, p_L1, u_L2, p_L2: 1.274730e-02, 3.576354e-01" correctly. | 30 May 2014, 05:32:36 UTC |
| c8bafe1 | Timo Heister | 30 May 2014, 02:32:54 UTC | fix tests broken in 46893f6 It turns out that the change to log stuff into output/log.txt changed the order of the header and the message of loading shared libs, which broke 40 tests. This fix restores the original order and only prints the header into the logfile as soon as that one is set up. | 30 May 2014, 02:33:27 UTC |
| 5b2b0f3 | Timo Heister | 30 May 2014, 01:24:07 UTC | Merge pull request #107 from bangerth/fix-MPI_C_BOOL-issue Fix the issue reported by Ian where an MPI implementation does not offer... | 30 May 2014, 01:24:07 UTC |
| f21afe1 | Timo Heister | 30 May 2014, 01:22:37 UTC | Merge pull request #105 from tjhei/fix_a_couple_of_todos Fix a couple of TODOs | 30 May 2014, 01:22:37 UTC |
| fb52d19 | Timo Heister | 29 May 2014, 22:03:50 UTC | add test | 30 May 2014, 01:21:59 UTC |
| 408add7 | Timo Heister | 29 May 2014, 22:02:04 UTC | fix pressure normalization | 30 May 2014, 01:21:59 UTC |
| e2e0dec | Timo Heister | 29 May 2014, 22:01:18 UTC | fix some TODOs | 30 May 2014, 01:21:55 UTC |
| 238ad6d | Wolfgang Bangerth | 30 May 2014, 00:55:24 UTC | Fix the issue reported by Ian where an MPI implementation does not offer MPI_C_BOOL. | 30 May 2014, 00:55:24 UTC |
| e80b0c8 | Timo Heister | 29 May 2014, 20:54:12 UTC | fix ambiguous if/else statement | 29 May 2014, 20:54:12 UTC |
| 12d128d | Timo Heister | 29 May 2014, 20:42:10 UTC | Merge branch 'fix-massively-parallel-error-message' of https://github.com/bangerth/aspect this closes pull request #104. | 29 May 2014, 20:42:10 UTC |
| 69d516d | Wolfgang Bangerth | 29 May 2014, 20:29:51 UTC | Write a changelog entry. | 29 May 2014, 20:40:22 UTC |
| 3aa29d5 | Wolfgang Bangerth | 29 May 2014, 20:22:05 UTC | Do not create output from processes != 0 if there is an error in the input file. | 29 May 2014, 20:39:53 UTC |
| 56a7e0a | Wolfgang Bangerth | 29 May 2014, 20:31:20 UTC | Merge pull request #103 from tjhei/multiplex_output multiplex output | 29 May 2014, 20:31:20 UTC |
| 21d75f3 | Timo Heister | 29 May 2014, 20:27:34 UTC | update changes.h | 29 May 2014, 20:27:34 UTC |
| 46893f6 | Timo Heister | 29 May 2014, 20:10:04 UTC | multiplex output All output is now also put into output/log.txt in addition to the screen. Some error messages are now only printed on processor 0 instead of on every processor. The header should be printed in case of early failure (for example no prm given), but also piped into the output file. For that reason it now lives in global.h. Update the version script to find the version info. | 29 May 2014, 20:12:55 UTC |
| ca9edc7 | Timo Heister | 29 May 2014, 19:57:37 UTC | Merge pull request #102 from bangerth/fix-defaults Add remove 'all' as a possibility for model names and other plugins. | 29 May 2014, 19:57:37 UTC |
| 471e013 | Wolfgang Bangerth | 29 May 2014, 19:40:21 UTC | Add remove 'all' as a possibility for model names and other plugins. | 29 May 2014, 19:40:21 UTC |
| 765581c | Timo Heister | 29 May 2014, 19:27:40 UTC | add .prm.out files to make eclipse happy Even though the .out files get generated by the Makefile in doc/ when you build manual.pdf, it turns out eclipse is complaining when the .out files are not present. Also remove the .out from .gitignore again and do not generate a .out for doc/manual/empty.prm because it is not used. | 29 May 2014, 19:27:40 UTC |
| 69ae04e | Wolfgang Bangerth | 29 May 2014, 19:12:33 UTC | Merge pull request #101 from tjhei/escape_angle_brackets escape angle brackets in parameters.tex | 29 May 2014, 19:12:33 UTC |
| a1d1b4c | Timo Heister | 29 May 2014, 18:55:21 UTC | Merge pull request #92 from bangerth/fix-pressure-postprocessor Fix pressure postprocessor | 29 May 2014, 18:55:21 UTC |
| c974808 | Wolfgang Bangerth | 29 May 2014, 18:54:11 UTC | Use a lower degree quadrature and explain why. | 29 May 2014, 18:54:11 UTC |
| af6ddbb | Timo Heister | 29 May 2014, 18:52:23 UTC | escape angle brackets in parameters.tex Note that we can not replace all occurences of < by $<$ because this will break if we are already inside a math formula. | 29 May 2014, 18:53:21 UTC |
| cd03281 | Wolfgang Bangerth | 29 May 2014, 17:48:05 UTC | Make sure the postprocessor can also work in case we use a direct solver, where pressure and velocity dofs reside in the same block. | 29 May 2014, 18:07:28 UTC |
| 9dba528 | Wolfgang Bangerth | 28 May 2014, 17:59:47 UTC | Sort the names of plugins. Sort the names of plugins in the documentation. Upon visual inspection, also fix a number of formulas and text issues found in the manual's description of the various plugins. | 29 May 2014, 18:07:28 UTC |
| 91dcf2b | Timo Heister | 29 May 2014, 17:49:55 UTC | Merge pull request #90 from bangerth/create-output-dir-2 Create output dir 2 | 29 May 2014, 17:49:55 UTC |
| cb65826 | Wolfgang Bangerth | 29 May 2014, 16:17:47 UTC | Update 1.1 release announcement. | 29 May 2014, 16:17:47 UTC |
| 4e234c4 | Timo Heister | 29 May 2014, 16:10:56 UTC | Merge pull request #91 from tjhei/version_stuff Automatic versioning, change layout of changes.h files | 29 May 2014, 16:10:56 UTC |
| e7be2c7 | Timo Heister | 29 May 2014, 14:53:56 UTC | update task list | 29 May 2014, 16:08:42 UTC |
| 15ce193 | Timo Heister | 29 May 2014, 14:46:46 UTC | version info scripts Introduced a ./VERSION file, output version when you start ASPECT, scripts to update version info (this updates the two places above and the manual). | 29 May 2014, 16:08:37 UTC |
| 261a16b | Timo Heister | 29 May 2014, 13:59:58 UTC | automatic version number stuff This adds a script increment_version.sh that does the required shuffling of changes.h and the other .h for specific versions. The layout of the files changed a bit so that automation is easy. | 29 May 2014, 16:07:19 UTC |
| 378971e | Wolfgang Bangerth | 29 May 2014, 16:03:49 UTC | Merge pull request #87 from gassmoeller/flexible_adiabatic_conditions Flexible adiabatic conditions | 29 May 2014, 16:03:49 UTC |
| f6fb450 | Wolfgang Bangerth | 29 May 2014, 15:58:01 UTC | Write warning message to std::cout instead of std::cerr. | 29 May 2014, 15:58:01 UTC |
| ac44989 | Wolfgang Bangerth | 29 May 2014, 15:57:33 UTC | Only create the directory on processor 0. | 29 May 2014, 15:57:33 UTC |
| 180bfc8 | Rene Gassmoeller | 29 May 2014, 15:48:22 UTC | Clarified plugin description test. | 29 May 2014, 15:48:22 UTC |
| 875e8d8 | Wolfgang Bangerth | 29 May 2014, 14:47:05 UTC | Fix up a parameter. Take into account that a user may want to specify a nested directory for which we would need to create multiple levels. | 29 May 2014, 15:39:12 UTC |
| 79afe0e | Wolfgang Bangerth | 28 May 2014, 22:25:34 UTC | Create the output directory if it doesn't exist. | 29 May 2014, 15:39:04 UTC |
| 68fb2f8 | Rene Gassmoeller | 29 May 2014, 15:25:06 UTC | Updated plugin description text. | 29 May 2014, 15:30:56 UTC |
| ea23cbd | Rene Gassmoeller | 29 May 2014, 15:24:46 UTC | Updated documentation and marked functions as virtual. | 29 May 2014, 15:30:56 UTC |
| 2dbb7bc | Rene Gassmoeller | 29 May 2014, 13:34:26 UTC | Activate the update function for AdiabaticConditions. | 29 May 2014, 15:30:56 UTC |
| 5197793 | Rene Gassmoeller | 29 May 2014, 13:34:07 UTC | Since we have a valid default value, we do not need to try-catch. | 29 May 2014, 15:30:56 UTC |
| 31eeec0 | Rene Gassmoeller | 29 May 2014, 13:33:10 UTC | Let InitialProfile create a constant AdiabaticProfile. | 29 May 2014, 15:30:56 UTC |
| ba10f94 | Rene Gassmoeller | 29 May 2014, 13:32:23 UTC | Allow initial conditions plugins to override the initialize() function. | 29 May 2014, 15:30:56 UTC |
| 5b72577 | Rene Gassmoeller | 29 May 2014, 13:31:52 UTC | Documentation updates. | 29 May 2014, 15:30:56 UTC |
| 9cd99dd | Rene Gassmoeller | 29 May 2014, 13:30:28 UTC | Use correct ifdef name. | 29 May 2014, 15:30:56 UTC |
| 6673dcd | Rene Gassmoeller | 27 May 2014, 15:04:58 UTC | Leave a comment. | 29 May 2014, 15:30:56 UTC |
| 35789a6 | Rene Gassmoeller | 27 May 2014, 15:02:42 UTC | Made AdiabaticConditions a plugin architecture as well. This resulted in changes to some material models since we no longer can ask whether get_adiabatic_conditions returns a null pointer (it will never do now), but instead we need to ask whether the adiabatic conditions are already calculated, which is a function that every adiabatic conditions plugin must implement. | 29 May 2014, 15:30:56 UTC |
| bf52d58 | Wolfgang Bangerth | 29 May 2014, 14:57:33 UTC | Merge pull request #89 from tjhei/fixes Code formatting and astyle | 29 May 2014, 14:57:33 UTC |
| 22fb38d | Wolfgang Bangerth | 29 May 2014, 14:55:48 UTC | Merge pull request #86 from gassmoeller/simulator_access_initial_conditions Simulator access initial conditions | 29 May 2014, 14:55:48 UTC |
| 81153cd | Rene Gassmoeller | 29 May 2014, 13:51:22 UTC | Changed an Assert to an AssertThrow. | 29 May 2014, 13:51:22 UTC |
| 4dd01c9 | Timo Heister | 29 May 2014, 03:39:41 UTC | fix copyright year | 29 May 2014, 12:43:39 UTC |
| 7669bf6 | Timo Heister | 29 May 2014, 03:38:50 UTC | wrap comments again | 29 May 2014, 12:43:39 UTC |
| 11951aa | Timo Heister | 29 May 2014, 03:38:19 UTC | run astyle | 29 May 2014, 12:43:39 UTC |
| 1fa0ff3 | Timo Heister | 29 May 2014, 03:36:44 UTC | comment wrapping, doxygen formatting | 29 May 2014, 12:43:39 UTC |
| 72b13b1 | Timo Heister | 29 May 2014, 03:36:30 UTC | fix doxygen formatting in header | 29 May 2014, 12:43:39 UTC |
| 9cbbdbc | Timo Heister | 29 May 2014, 12:15:45 UTC | Merge pull request #88 from tjhei/fix_a_test fix test output | 29 May 2014, 12:15:45 UTC |
| b756f87 | Timo Heister | 29 May 2014, 04:01:16 UTC | make update_parameters.sh script more robust | 29 May 2014, 04:01:16 UTC |
| 70bf89b | Timo Heister | 29 May 2014, 03:28:50 UTC | fix test output | 29 May 2014, 03:28:50 UTC |
| ed82354 | Timo Heister | 28 May 2014, 18:49:57 UTC | Merge pull request #84 from bangerth/sort-model-names-try-2 Sort the names of plugins. | 28 May 2014, 18:49:57 UTC |
| 9d9fcba | Wolfgang Bangerth | 28 May 2014, 17:59:47 UTC | Sort the names of plugins. Sort the names of plugins in the documentation. Upon visual inspection, also fix a number of formulas and text issues found in the manual's description of the various plugins. | 28 May 2014, 17:59:47 UTC |
| 873554b | Wolfgang Bangerth | 28 May 2014, 15:19:55 UTC | Merge pull request #83 from tjhei/solver_statistics Solver Statistics | 28 May 2014, 15:19:55 UTC |
| 3323e7a | Timo Heister | 28 May 2014, 15:09:26 UTC | update test outputs | 28 May 2014, 15:09:26 UTC |
| 7638523 | Timo Heister | 28 May 2014, 14:22:23 UTC | log number of inner iterations in Stokes preconditioner | 28 May 2014, 14:22:23 UTC |
| 434a201 | Wolfgang Bangerth | 28 May 2014, 00:18:39 UTC | Make message look uniform. | 28 May 2014, 00:18:39 UTC |
| 7b851ea | Wolfgang Bangerth | 28 May 2014, 00:18:08 UTC | Give an indication of how many tests we have. | 28 May 2014, 00:18:08 UTC |
| 443ee79 | Wolfgang Bangerth | 28 May 2014, 00:11:21 UTC | Make message look uniform. | 28 May 2014, 00:11:21 UTC |
| 586c90b | Wolfgang Bangerth | 27 May 2014, 23:18:39 UTC | Augment documentation slightly. | 27 May 2014, 23:18:39 UTC |
| 36d8703 | Wolfgang Bangerth | 27 May 2014, 22:50:50 UTC | Merge pull request #76 from tjhei/simpler_model Implement simpler model | 27 May 2014, 22:50:50 UTC |
| 6068770 | Timo Heister | 27 May 2014, 18:31:48 UTC | fix error message formatting in cmake project | 27 May 2014, 18:31:48 UTC |
