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09 January 2021, 06:17:16 UTC
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RevisionAuthorDateMessageCommit Date
755ceef Prashant Pandey30 November 2017, 16:57:50 UTCAdding Squeakr exact.30 November 2017, 16:57:50 UTC
485b9d5 Prashant Pandey30 November 2017, 16:41:59 UTCMerge branch 'master' of github.com:splatlab/squeakr30 November 2017, 16:41:59 UTC
c27fb52 Prashant Pandey30 November 2017, 16:41:02 UTCMerge branch 'development'30 November 2017, 16:41:05 UTC
f9436cd Rob Patro18 November 2017, 19:44:17 UTCMerge branch 'development'30 November 2017, 16:40:43 UTC
0217339 Prashant Pandey30 November 2017, 16:38:46 UTCUpdating README.30 November 2017, 16:38:46 UTC
27e9b49 Prashant Pandey30 November 2017, 16:33:39 UTCFixing a minor bug in inner product CLI.30 November 2017, 16:33:39 UTC
c9dca4b Prashant Pandey30 November 2017, 16:25:46 UTCAddig CLI interface to other two commands.30 November 2017, 16:25:46 UTC
bd6ade1 Rob Patro18 November 2017, 19:44:17 UTCMerge branch 'development'18 November 2017, 19:44:19 UTC
110be94 Rob Patro18 November 2017, 19:43:32 UTCMerge branch 'master' of https://github.com/splatlab/squeakr18 November 2017, 19:43:39 UTC
3d71cf0 Rob Patro18 November 2017, 19:38:09 UTCMerge branch 'development'18 November 2017, 19:43:14 UTC
4ca288b Rob Patro18 November 2017, 19:42:55 UTCUpdate README.md18 November 2017, 19:42:55 UTC
ac4777b Rob Patro18 November 2017, 19:38:09 UTCMerge branch 'development'18 November 2017, 19:40:20 UTC
cddfc92 Rob Patro18 November 2017, 19:36:54 UTCmerge18 November 2017, 19:36:54 UTC
b2e4489 Rob Patro18 November 2017, 19:34:49 UTChold18 November 2017, 19:34:49 UTC
e16bf41 Rob Patro18 November 2017, 19:33:44 UTCmake sure this folder exists18 November 2017, 19:33:44 UTC
20c699c Prashant Pandey18 November 2017, 06:18:41 UTCWork with the new CLI18 November 2017, 06:18:41 UTC
01aa926 rob-p17 November 2017, 03:28:08 UTCmerge17 November 2017, 03:28:08 UTC
6799ad0 rob-p17 November 2017, 03:26:51 UTCprepare for merge with newest features17 November 2017, 03:26:51 UTC
c860bbf Prashant Pandey17 November 2017, 02:47:51 UTCAdding code to pass a prefix as an argument.17 November 2017, 02:47:51 UTC
7d813e6 rob-p17 November 2017, 02:45:29 UTCfix merge17 November 2017, 02:45:29 UTC
277bca0 rob-p17 November 2017, 02:44:58 UTCadd named paramaters to squeakr-count17 November 2017, 02:44:58 UTC
8382a7b Prashant Pandey17 November 2017, 02:28:13 UTCFixing a bug in naming the file.17 November 2017, 02:28:13 UTC
558a107 Prashant Pandey16 November 2017, 19:28:07 UTCAdding code for enabling users to specify the k-mer size as in input parameter.16 November 2017, 19:28:07 UTC
3e9bfdd Prashant Pandey16 November 2017, 19:20:28 UTCMerge branch 'master' of github.com:splatlab/squeakr16 November 2017, 19:20:28 UTC
74f4455 Prashant Pandey16 November 2017, 19:17:05 UTCMerge branch 'development' of github.com:splatlab/squeakr into development16 November 2017, 19:17:05 UTC
aa47530 Prashant Pandey16 November 2017, 19:16:49 UTCAdding scripts for merging.16 November 2017, 19:16:49 UTC
a78c426 Prashant Pandey14 November 2017, 18:47:46 UTCMerge branch 'master' of github.com:splatlab/squeakr16 November 2017, 19:14:56 UTC
4601cfd Prashant Pandey16 November 2017, 19:12:11 UTCUpdating README.16 November 2017, 19:12:11 UTC
63f6d76 Prashant Pandey16 November 2017, 19:10:30 UTCAdding code for enabling users to specify the k-mer size as in input parameter.16 November 2017, 19:10:30 UTC
060ab36 Prashant Pandey14 November 2017, 18:47:46 UTCMerge branch 'master' of github.com:splatlab/squeakr14 November 2017, 18:47:46 UTC
0c2ffe4 Prashant Pandey14 November 2017, 18:47:40 UTCUsing the same seed for the hash function in every run.14 November 2017, 18:47:40 UTC
2e7916c Prashant Pandey09 November 2017, 17:24:36 UTCUpdate README.md09 November 2017, 17:24:36 UTC
818a7bf Prashant Pandey09 November 2017, 17:22:23 UTCUpdate README.md09 November 2017, 17:22:23 UTC
e858595 Prashant Pandey04 November 2017, 00:19:37 UTCMoving a comment from gqf.c to the header file where it belongs.04 November 2017, 00:19:37 UTC
0b1a790 Prashant Pandey04 November 2017, 00:16:01 UTCRemoving SSL dependency.04 November 2017, 00:16:01 UTC
f1e877d Prashant Pandey31 October 2017, 00:26:50 UTCFixing a minor bug when you write a CQF to using qf_serialize and read it back using qf_read.31 October 2017, 00:26:50 UTC
2e1af52 Prashant Pandey19 September 2017, 01:54:14 UTCRemoved call to fallocate to preallocate space of the file on disk.19 September 2017, 01:54:14 UTC
59c6f27 Prashant Pandey18 September 2017, 16:16:27 UTCMinor README tweaks.18 September 2017, 16:16:27 UTC
55ee912 Prashant Pandey18 September 2017, 04:21:31 UTCUpdating Makefile to append flags to CXX and LD instead of overwriting them.18 September 2017, 04:21:31 UTC
e7de0a2 Rob Patro18 September 2017, 02:48:25 UTCchanges to makefile18 September 2017, 02:48:25 UTC
d7c2b5c Prashant Pandey18 September 2017, 00:07:54 UTCAdding help option and updating executable names.18 September 2017, 00:07:54 UTC
83e47ce Prashant Pandey08 September 2017, 20:57:21 UTCFixing a bug in the thread-safe CQF code. Also, updating the README with instructions about the query API.08 September 2017, 20:57:21 UTC
ed9b52e Prashant Pandey08 September 2017, 20:56:43 UTCMerge branch 'master' of github.com:splatlab/squeakr08 September 2017, 20:56:43 UTC
5853609 Prashant Pandey08 September 2017, 20:56:21 UTCFixing a bug in the thread-safe CQF code. Also, updating the README with instructions about the query API.08 September 2017, 20:56:21 UTC
6604ddf Prashant Pandey08 May 2017, 21:39:48 UTCUpdate README.md08 May 2017, 21:39:48 UTC
8760147 Prashant Pandey02 May 2017, 13:33:16 UTCChanging the gzFile type to make it compatible for MAC OS 10.11 compatible.02 May 2017, 13:33:16 UTC
f15a067 Prashant Pandey02 May 2017, 13:07:52 UTCUpdate README.md02 May 2017, 13:07:52 UTC
4c60869 Prashant Pandey02 May 2017, 13:07:05 UTCAdding library dependencies in the README. Also, added a note that Squeakr currently only supports fastq file formats.02 May 2017, 13:07:05 UTC
849dbe1 Prashant Pandey12 April 2017, 02:09:49 UTCFixing a small assertion bug in the CQF.12 April 2017, 02:09:49 UTC
7950058 Prashant Pandey04 April 2017, 22:32:43 UTCUpdate README.md04 April 2017, 22:32:43 UTC
da534d3 Prashant Pandey04 April 2017, 22:29:40 UTCAdded an alternate implementation of select on machine words to work on non-Haswell hardware. Also, updated the Makefile and removed libs folder.04 April 2017, 22:29:40 UTC
6aa21e1 Prashant Pandey04 March 2017, 01:20:37 UTCMerge branch 'master' of github.com:splatlab/squeakr04 March 2017, 01:20:37 UTC
641ec99 Prashant Pandey04 March 2017, 01:20:25 UTCAdding missing libraries.04 March 2017, 01:20:25 UTC
27c0e7a Prashant Pandey05 February 2017, 01:22:23 UTCUpdate README.md05 February 2017, 01:22:23 UTC
e1eeae6 Prashant Pandey05 February 2017, 01:14:02 UTCUpdate README.md05 February 2017, 01:14:02 UTC
0278994 Prashant Pandey05 February 2017, 00:22:35 UTCUpdate README.md05 February 2017, 00:22:35 UTC
2f20be8 Prashant Pandey05 February 2017, 00:07:38 UTCUpdate README.md05 February 2017, 00:07:38 UTC
3374258 Prashant Pandey05 February 2017, 00:06:30 UTCAdding a sample query benchmark.05 February 2017, 00:06:30 UTC
013a66e Prashant Pandey04 February 2017, 23:46:14 UTCUpdate README.md04 February 2017, 23:46:14 UTC
8940c94 Prashant Pandey04 February 2017, 23:21:09 UTCAdding code for Squeakr.04 February 2017, 23:21:09 UTC
4a94369 Prashant Pandey04 February 2017, 22:09:14 UTCInitial commit04 February 2017, 22:09:14 UTC
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