| e60940b | Zhang Yunjun | 14 May 2019, 18:53:11 UTC | version: bug fix when no new commit after last release | 14 May 2019, 19:04:10 UTC |
| 5cbe914 | Zhang Yunjun | 14 May 2019, 17:54:29 UTC | docs: update (#62) * update label in figures of example datasets * update acronym and the version number in README.md | 14 May 2019, 17:54:29 UTC |
| 4c2b6f8 | Zhang Yunjun | 12 May 2019, 16:56:25 UTC | rename PySAR to MintPy (#61) $PYSAR_HOME --> $MINTPY_HOME #used in installation and documentations. PySAR --> MintPy #for names in comments and text mostly. pysar --> mintpy #for module import pysarApp.py --> smallbaselineApp.py sh/plot_pysarApp.sh --> sh/plot_smallbaselineApp.sh #shell script to plot results of sbasApp.py defaults/pysarApp.cfg --> smallbaselineApp_auto.cfg #files of specific option value for all "auto" in sbasApp.cfg pysar.load.unwFile --> mintpy.load.unwFile objects rename giantobj --> giant insarobj --> stackDict pysarobj --> stack update file/dir structure /PYSAR --> /mintpy /GEOCODE --> /geo #files after runing geocoding (for dataset in radar coordinates only as dataset in geo coordinates won't need to run geocode.py) /INPUTS --> /inputs #input files folder, so that one can move/copy this folder and re-generate everything afterwards. /PIC --> /pic #for figures, kmz files, etc. adjust all related documents, comments, notebooks | 12 May 2019, 16:56:25 UTC |
| db9dfa5 | Zhang Yunjun | 09 May 2019, 02:59:04 UTC | update comments (#60) + docs/paper: update link for nbviewer + add temp-c custom colormap cpt file + add -s besides --start-date and -e besides --end-date for timeseries2velocity.py + asc_desc2horz_vert: add example to prepare asc/desc data | 09 May 2019, 02:59:04 UTC |
| a9ec91b | Zhang Yunjun | 02 May 2019, 23:18:00 UTC | geocode: add OMP_NUM_THREADS control + add geocode/check_num_processor() to check OMP_NUM_THREADS if it's defined in environment variable and use it if --nprocs is not specified. + set default --nprocs to 1 because 1) bonding between pykdtree and openmp is not clear yet and 2) the speedup is negligible for macport install and slows down for conda install + change default nprocs value to 1 in objects/resample.py + detect lookup table file in current directory besides the INPUTS directory. | 03 May 2019, 00:25:36 UTC |
| 406c823 | Zhang Yunjun | 01 May 2019, 17:19:31 UTC | geocode: fix typo in help (#57) fix typo in geocode.py and objects/pysarobj.py | 01 May 2019, 17:19:31 UTC |
| 3caeaea | Zhang Yunjun | 30 April 2019, 20:55:53 UTC | pysarApp: more compatiable with py2-pyaps (#55) * Update README.md * pysarApp: more compatiable with py2-pyaps calling tropo_pyaps.py as an executable script using subprocess.Popen() to make pysarApp.py works with py2-pyaps from caltech. The current way of importing tropo_pyaps as an sub-module is preferred but it failed to import python2 sub-modules in python3 environment. | 30 April 2019, 20:55:53 UTC |
| d62d1b3 | Bhuvan Varugu | 30 April 2019, 20:28:39 UTC | save_roipac.py: bug fix for data reading for single dataset files (#53) * added read data line for all file types of single datasets | 30 April 2019, 20:28:39 UTC |
| bd67db3 | Zhang Yunjun | 30 April 2019, 17:30:16 UTC | test/test_pysarApp: add argument parsing + add argument parsing functions to be more user friendly. + add --dir to be able to change test directory + add --nofresh to be able to start processing not from the scratch, suitable for testing bugs in the middle of processing. | 30 April 2019, 20:09:42 UTC |
| b3a4176 | Zhang Yunjun | 30 April 2019, 15:32:31 UTC | timeseries_rms: bug fix for plotting (#52) * bug fixed for timeseries_rms * Update prep_isce.py | 30 April 2019, 15:32:31 UTC |
| b54877d | Zhang Yunjun | 29 April 2019, 15:27:40 UTC | bugs fix for unwrap error correction (#51) docs/examples/input_files/GalapagosSenDT128.template: add pysar.load.waterMaskFile generated by ISCE pysar.unwrapError.waterMaskFile: change default value to waterMask.h5 or no if waterMask.h5 is not found; to be the same as pysar.network.waterMaskFile and pysar.networkInversion.waterMaskFile dem_error: bug fixed for 3D bperp reading when it has different number of acquisitions from the time-series file get rid of string yunjunz from the code in objects/sensor.py and version.py unwrap_error_phase_closure: fix bugs when there are interferograms excluded in ifgramStack.h5 file utils/writefile: fix bug in remove_hdf5_dataset() when input fname is not just basename. version: move code into get_release_info() Update installation.md | 29 April 2019, 15:27:40 UTC |
| 18f11e4 | Zhang Yunjun | 27 April 2019, 02:03:25 UTC | version: auto grab code version and date + do not install pykml through conda channel, which will cause error; install py2/3-pykml from yunjunz through Anaconda's pip + remove openmp from requirements.txt as it's not directly used by pysar, it's used by pyresample implictly | 27 April 2019, 03:06:10 UTC |
| eb222bb | Zhang Yunjun | 26 April 2019, 20:02:03 UTC | info: rename --nodrop to --show-ifgram info: + rename previous --nodrop option to --show / --show-ifgram option to avoid confusion + bug fixed for --num option when show kept interferograms only. + simplified code plot/select_network: rename --nodrop to --show-kept to avoid confusion. | 26 April 2019, 20:06:07 UTC |
| 29311e4 | Zhang Yunjun | 26 April 2019, 03:09:52 UTC | Update installation.md | 26 April 2019, 03:09:52 UTC |
| 11cfce4 | Zhang Yunjun | 26 April 2019, 03:06:28 UTC | Update installation.md | 26 April 2019, 03:06:28 UTC |
| 8a84005 | Lei | 26 April 2019, 00:50:17 UTC | pysarApp: expose more parameters for empirical tropospheric delay correction (#46) * expose `pysar.troposphericDelay.minCorrelation` option. * pass `pysar.troposphericDelay.looks` from `pysarApp.py` to `tropo_phase_elevation.py` | 26 April 2019, 00:50:17 UTC |
| 9cce2b9 | Zhang Yunjun | 25 April 2019, 21:38:42 UTC | docs/tutorials/pysarApp: update superlink | 25 April 2019, 21:40:15 UTC |
| d067089 | Zhang Yunjun | 25 April 2019, 21:33:30 UTC | installation: more note on parallel setup | 25 April 2019, 21:33:30 UTC |
| 730c2e3 | Zhang Yunjun | 25 April 2019, 17:08:04 UTC | prep_gamma: add LAT/LON_REF1/2/3/4 info to geometry files + merge `extract_metadata4dem_geo()` and `extract_metadata4lookup_table` into `extract_metadata4geometry_geo()` + rename `extract_metadata4dem_radar()` to `extract_metadata4geometry_radar()` + searching for LAT/LON_REF1/2/3/4 info for geometry files in radar coordinates + move code inside prepare_metadata() into main() | 25 April 2019, 19:18:56 UTC |
| f3eb60d | Zhang Yunjun | 24 April 2019, 02:26:02 UTC | docs/paper: add shell scripts | 25 April 2019, 02:14:03 UTC |
| 63a6ea8 | Zhang Yunjun | 24 April 2019, 02:00:34 UTC | add docs/paper Add `docs/paper` for the figures in Yunjun et al., 2019 | 24 April 2019, 02:14:39 UTC |
| 30b3ada | Zhang Yunjun | 24 April 2019, 01:47:15 UTC | docs/examples/input_files: add template files for the paper Update README.md | 24 April 2019, 02:14:39 UTC |
| bb0f91f | Zhang Yunjun | 24 April 2019, 00:39:55 UTC | move examples to docs/examples | 24 April 2019, 02:14:39 UTC |
| 666612b | Zhang Yunjun | 24 April 2019, 00:36:30 UTC | docs: rename Notebooks to tutorials | 24 April 2019, 02:14:39 UTC |
| 1a7ad41 | Zhang Yunjun | 23 April 2019, 15:52:58 UTC | tropo_pyaps3: bug fix | 24 April 2019, 02:14:39 UTC |
| 8990a58 | Zhang Yunjun | 22 April 2019, 21:45:22 UTC | utils/ptime: add datenum2datetime + utils/ptime: add datenum2datetime() to convert Matlab datenum into Python datetime format + timeseries_rms: update matplotlib.pyplot.bar usage in plot_rms_bar(). | 24 April 2019, 02:14:39 UTC |
| 1a48e97 | Zhang Yunjun | 19 April 2019, 22:15:55 UTC | save_roipac: support HDF_EOS5 file + objects/pysarobj: add HDFEOS.get_date_list() + utils/readfile: remove the following obsolete global variables for py2 psyar: - multi_group_hdf5_file - multi_dataset_hdf5_file - single_dataset_hdf5_file + save_roipac: - remove --ref-date option because it's not convenient to use - support date1_date2 input for timeseries and HDFEOS files to change reference date easily. - support HDF-EOS5 file, including the displacement, temporalCoherence and all geometry datasets. | 19 April 2019, 22:23:24 UTC |
| fd15fd2 | Zhang Yunjun | 19 April 2019, 05:21:32 UTC | update docs for pyaps3 + update requirements for pyaps3 + update installation for pyaps3 and dask setup + simplify README.md | 19 April 2019, 22:22:02 UTC |
| e53f3a3 | Zhang Yunjun | 19 April 2019, 02:45:45 UTC | ifgram_inversion: add NUM_WORKERS back for dask | 19 April 2019, 04:24:33 UTC |
| 24c41a2 | Zhang Yunjun | 19 April 2019, 02:20:59 UTC | add tropo_pyaps3.py for pyaps3 with ERA5 print message adjustment in view.py and objects/pysarobj.py add tropo_pyaps3.py in response to pyaps3 from Angelique Benoit on Github, compared with tropo_pyaps.py, there are several changes: 1. add support for ERA-5 dataset with hourly temporal resolution and ~32 km spatial resoluion. 2. use ERA5, ERAINT etc as weatherModel name instead of ECMWF, which is essential an organization name. 3. do not generate and remove ROIPAC style geometry files with rsc file anymore as the input of PYAPS is 2D array directly. 4. ERA5 support area subset download, instead of previously ERAI downloads the data for the entire world, saves a lot of space. 5. do not set minimum file size anymore as area subset file is very small. 6. merge radar/geo coordinates PyAPS objects into one, as the input of lat/lon does not distinguish radar or geo | 19 April 2019, 04:24:33 UTC |
| 07ebc84 | Zhang Yunjun | 18 April 2019, 22:58:10 UTC | add parallel option to template file 1. add the following two option into pysarApp_template.txt for parallel processing: + pysar.networkInversion.parallel with auto for no + pysar.networkInversion.numWorker with auto for 40 ifgram_inversion: + catch and print import error for dask modules + change minRedundancy variable type from float to int + support reading parallel options from input template file + remove obsolete option `skip_zero_phase` + rename the following two functions: - split_into_boxes() --> split2boxes() - subsplit_boxes_by_num_workers() --> subsplit_boxes4workers() + use inps.numWorker directly without NUM_WORKERS + rename variable number_of_splits to num_split | 19 April 2019, 04:24:33 UTC |
| 4ce81aa | Zhang Yunjun | 18 April 2019, 04:14:47 UTC | Revert "ifgram_inversion: import dask module for --parallel option only" This reverts commit d1499c7f17f7f63055554aa9c940641e6d007f13. | 19 April 2019, 04:24:33 UTC |
| 2fcff4e | Zhang Yunjun | 14 April 2019, 17:03:31 UTC | ifgram_inversion: import dask module for --parallel option only | 19 April 2019, 04:24:33 UTC |
| fcf5758 | Falk Amelung | 19 April 2019, 01:05:30 UTC | remove temporarily `import dask` (#40) | 19 April 2019, 01:05:30 UTC |
| b043522 | Zhang Yunjun | 18 April 2019, 04:07:43 UTC | utils/readfile: bug fix while reading ISCE file with full in filename (#39) utils/readfile: + exclude `.full` while checking FILE_TYPE for ISCE binary files + more generic read_binary() by do not distinguish num_band utils/writefile: update comments | 18 April 2019, 04:07:43 UTC |
| ba88a24 | Zhang Yunjun | 16 April 2019, 21:23:33 UTC | process_isce_stack: copy masterShelve to the root directory (#38) * process_isce_stack: add copy_masterShelve() * process_isce_stack: add --submit as an alternative to --bsub * utils/plot: use "1 km" instead of "1000 m" for scale bar * utils/plot: adjust parameter for DEM shaded relief min/max | 16 April 2019, 21:23:33 UTC |
| 4abe4c3 | David W Grossman | 15 April 2019, 20:02:11 UTC | updated minimum dask_jobqueue version (#37) * updated minimum dask_jobqueue version | 15 April 2019, 20:02:11 UTC |
| d3cac2b | Zhang Yunjun | 14 April 2019, 16:56:55 UTC | bug fix for tsview when reference point is outside of the display subset (#34) | 14 April 2019, 16:56:55 UTC |
| c2cdc11 | David W Grossman | 13 April 2019, 17:39:38 UTC | Lowered Dask memory config | 13 April 2019, 17:39:38 UTC |
| 5e3beda | Zhang Yunjun | 11 April 2019, 23:57:56 UTC | utils/utils: add win_size in read_timeseries_lalo/yx (#33) | 11 April 2019, 23:57:56 UTC |
| ad15a88 | David W Grossman | 10 April 2019, 15:18:16 UTC | Added Dask config defaults & fixed #31 (#32) * Updated Dask config and refactored Dask comments * Fix for #31 and fix cluster.close() throwing an exception * Added examples, added NUM_WORKERS to params, cleaned up subsplit() func * add par parser group for num_workers | 10 April 2019, 15:18:16 UTC |
| dc776ac | David W Grossman | 09 April 2019, 21:50:08 UTC | Included dask-jobqueue in the imports (#29) dask-jobqueue is the library used to run Dask on HPC. | 09 April 2019, 21:50:08 UTC |
| 15e6441 | Zhang Yunjun | 09 April 2019, 19:43:23 UTC | ifgram_inversion: bug fixed while runing in command line (#30) | 09 April 2019, 19:43:23 UTC |
| ed5c794 | Zhang Yunjun | 08 April 2019, 23:57:34 UTC | save_roipac: drop all lower case keys for geodmod (#28) + save_roipac: drop all attributes with key name not all upper case, to better support geodmod + utils/readfile: add default value for num_band and band_interleave | 08 April 2019, 23:57:34 UTC |
| d49789f | Zhang Yunjun | 08 April 2019, 22:08:33 UTC | examples: add notebook for GACOS (#27) * dem_gsi: add reference datum info + add reference datum info into xml file so that ISCE will not convert it again, as DEHM from GSi is already in ellipsoid. The indent needs to be adjusted, this should not be a problem for now. + change default output name to be consistent with ISCE convention: gsi10m.dem --> gsi10m.dem.wgs84 * ports: remove sundials and petsc due to gcc5 and 8 conflict * examples: add notebook for GACOS add example notebook to correct tropospheric delay using GACOS product for geocoded time-series file. | 08 April 2019, 22:08:33 UTC |
| 3b1b5ab | David Grossman | 08 April 2019, 17:31:05 UTC | Added requirements for using dask Conda installs all of dask with a simple `conda install dask`, however pip fails to install a dependency for Dask's distributed dashboard, `bokeh`. The `bokeh` requirement is included in the `requirements.txt` file but not in the `conda.txt` file. | 08 April 2019, 17:31:05 UTC |
| 803523b | David W Grossman | 08 April 2019, 16:47:00 UTC | Moved `requirements.txt` to the base directory (#26) * Moved `requirements.txt` to the base directory It is a common practice amongst open source projects to have requirements.txt files in the base directory. This commit follows that practice. * Changed updated path of requirements file in installation.md | 08 April 2019, 16:47:00 UTC |
| e9a8886 | Zhang Yunjun | 06 April 2019, 22:23:46 UTC | Update installation.md | 06 April 2019, 22:23:46 UTC |
| b44d858 | Zhang Yunjun | 05 April 2019, 02:26:17 UTC | tropo velocity: adjust file name following Falk's suggestion (#25) pysarApp.py: + adjust the velocity file name of tropospheric delay time-series: use `velocityECMWF.h5` instead of `velocityEcmwf.h5`, to be more consistent with other file names. + fix bug related with the update mode of save_kmz.py calling. adjust plot_pysarApp.sh accordingly. | 05 April 2019, 02:26:17 UTC |
| b4bda00 | Zhang Yunjun | 03 April 2019, 05:05:47 UTC | prep_gamma: support more flexible file naming (#24) * prep_gamma: more flexible file name pattern * fix bugs detected by codacy | 03 April 2019, 05:05:47 UTC |
| 3d162a8 | Zhang Yunjun | 03 April 2019, 02:10:02 UTC | Update installation.md | 03 April 2019, 02:19:12 UTC |
| f2c11b5 | Zhang Yunjun | 02 April 2019, 19:17:23 UTC | installation: note to install pyhdf for macports | 02 April 2019, 19:17:23 UTC |
| 5792051 | Zhang Yunjun | 02 April 2019, 15:32:37 UTC | readfile: add DATA_TYPE for binary files utils/readfile: + add DATA_TYPE metadata for binary files in read() + comment the Exception statement to be able to read more files without fixed file extension, such as .ztd from GACOS, although this will skip error message for potential reading mistakes. | 02 April 2019, 15:34:07 UTC |
| e3b3d10 | Zhang Yunjun | 01 April 2019, 22:37:42 UTC | plot_coherence_matrix: support geo coded insar stack + plot_coherence_matrix: add support for geocoded ifgramStack.h5 + subset: bug fixed for -o/--output option + detect geometryGeo.h5 file if geometryRadar.h5 does not exists. | 01 April 2019, 22:40:04 UTC |
| 91b9f3e | Zhang Yunjun | 01 April 2019, 00:42:06 UTC | pysarApp: load waterMask from stripmapStack + add pysar.load.waterMaskFile to be able to load waterMask.rdr generated by ISCE/stripmapStack (Yunjun's version for now, plan to push to isce-framework later) + change the default value of pysar.networkInversion.waterMaskFile to waterMask.h5 if it's existed. waterMask.h5 will be automatically generated if it's loaded into geometry*.h5 + re-run ifgram_inversion.py if REF_Y/X are changed. + print warnings if ISCE meta file is not found. + pysarApp: add generate waterMask.h5 file from geometry* files remove_ramp: + add --update option for remote_ramp so that it will re-run if ramp type is changed. + remote multiple input files support for simplicity. utils/utils1.py: + add get_geometry_file() back | 01 April 2019, 16:50:21 UTC |
| f9fd0d7 | Zhang Yunjun | 31 March 2019, 17:53:28 UTC | sh/plot_pysarApp: move KMZ files to PIC folder | 01 April 2019, 16:50:21 UTC |
| b9cc1bb | Zhang Yunjun | 28 March 2019, 19:27:44 UTC | update scripts for isce stack processing (#2) * mask: set int amp/pha to zero * process_isce_stack: add masterDate | 01 April 2019, 16:50:21 UTC |
| 572cbf7 | Zhang Yunjun | 28 March 2019, 16:55:28 UTC | remote CODEOWNERS remote docs/CODEOWNERS file, for now, to disable the automatic reviewers assignment of pull request as it's not really useful in the current scenario. | 28 March 2019, 16:55:28 UTC |
| 258f379 | Zhang Yunjun | 28 March 2019, 16:24:42 UTC | test: add Wells dataset + add WellsEnvD2T399 example dataset in test/test_pysarApp. + update DOI number for Fernandina dataset + use template files from code for the latest options, instead of the uploaded files in zenodo. + remove obsolete weatherDir setup in template files as WEATHER_DIR is detected. | 28 March 2019, 16:51:07 UTC |
| b93944b | Zhang Yunjun | 28 March 2019, 01:00:13 UTC | remove joblib module requirement Remove joblib usage because it does not improve the runing speed much. Remove check_parallel() function calling in `prep_gamma.py`, `prep_roipac.py` and `subset.py`. update docs/requirements.txt and docs/conda.txt add usage example in the comments of check_parallel() in pysar/utils/utils0.py. | 28 March 2019, 16:51:07 UTC |
| eb80542 | Zhang Yunjun | 28 March 2019, 15:34:22 UTC | installation: more notes on PyAPS | 28 March 2019, 15:34:22 UTC |
| cbe6692 | Zhang Yunjun | 27 March 2019, 20:03:31 UTC | nb/pysarApp: adjust for the order change of modify_network + update pysarApp_workflow + adjust pysarApp.ipynb | 27 March 2019, 21:04:54 UTC |
| 9af4d38 | Zhang Yunjun | 27 March 2019, 19:51:31 UTC | plot/plot_network: add disp_legend option (#1) | 27 March 2019, 19:59:17 UTC |
| 483990e | Zhang Yunjun | 27 March 2019, 01:02:46 UTC | docs: remote obsolete manual and template file + remote obsolete manual pdf/html + remote obsolete QR code image + remote pysarApp_template.txt fiel as it's now in pysar/defaults folder | 27 March 2019, 19:59:17 UTC |
| c7f64f7 | Zhang Yunjun | 27 March 2019, 00:45:14 UTC | Add more reviewers in docs/CODEOWNERS + Update CONTRIBUTING.md | 27 March 2019, 19:59:17 UTC |
| a479c0a | Zhang Yunjun | 27 March 2019, 16:10:21 UTC | remove unused module import detected by codacy (#14) Fix issues detected by codacy, including: + remove unused module imports + remove unused variables + bugs fix | 27 March 2019, 16:10:21 UTC |
| eca1fb7 | Zhang Yunjun | 27 March 2019, 00:35:43 UTC | Create CONTRIBUTING.md (#15) | 27 March 2019, 00:35:43 UTC |
| eb54bb7 | Zhang Yunjun | 26 March 2019, 17:57:50 UTC | add docs/CODEOWNERS (#13) * add docs/CODEOWNERS | 26 March 2019, 17:57:50 UTC |
| fbe62f4 | Zhang Yunjun | 26 March 2019, 02:33:21 UTC | Merge pull request #12 from yunjunz/master README: remove FOSSA status checking | 26 March 2019, 02:33:21 UTC |
| 081ee54 | Zhang Yunjun | 26 March 2019, 02:32:38 UTC | README: remove FOSSA status checking | 26 March 2019, 02:32:38 UTC |
| e5c58cc | Zhang Yunjun | 26 March 2019, 01:20:44 UTC | Merge pull request #11 from yunjunz/master update Github links from yunjunz to insarlab | 26 March 2019, 01:20:44 UTC |
| 2a75389 | Zhang Yunjun | 26 March 2019, 01:19:34 UTC | docs: update links to insarlab | 26 March 2019, 01:19:34 UTC |
| 190fa7d | Zhang Yunjun | 26 March 2019, 01:09:15 UTC | Github Page: update links | 26 March 2019, 01:09:15 UTC |
| df98f37 | Heresh Fattahi | 25 March 2019, 21:41:14 UTC | Merge pull request #10 from yunjunz/master pull request before moving to insarlab organization | 25 March 2019, 21:41:14 UTC |
| 4f7d37a | Zhang Yunjun | 24 March 2019, 04:14:15 UTC | add WellEnvD2T399.txt | 24 March 2019, 04:14:15 UTC |
| f60e23f | Zhang Yunjun | 24 March 2019, 03:45:55 UTC | Merge pull request #42 from yunjunz/dev Dev | 24 March 2019, 03:45:55 UTC |
| ce2844a | Zhang Yunjun | 24 March 2019, 03:43:56 UTC | add figure for WellsEnvD2-gamma | 24 March 2019, 03:43:56 UTC |
| 4c8bc79 | Zhang Yunjun | 22 March 2019, 18:29:14 UTC | tropo_pyaps: check existed tropo_file size | 22 March 2019, 18:29:48 UTC |
| e782cf0 | Zhang Yunjun | 22 March 2019, 03:46:42 UTC | modify_network: use waterMask.h5 as the primary default value switch auto value for step "modify_network" from "no" to "waterMask.h5" or "no" if waterMask.h5 does not exist. This will also fix the bug of not updating introduced by recent step order change of moving modify_network before reference_point modify_network: print out excluded dates | 22 March 2019, 18:29:48 UTC |
| f0c0191 | Zhang Yunjun | 22 March 2019, 02:35:18 UTC | tropo_pyaps: support ${WEATHER_DIR} add support of identifying environmental variable "WEATHER_DIR" for the default location of downloaded GAMs files. switch the default value for the weather directory to ${WEATHER_DIR] in both pysarApp.py and tropo_pyaps.py. Use the current directory "./" as the fallback value if WEATHER_DIR is not found and identified. | 22 March 2019, 02:35:18 UTC |
| a33bb99 | Zhang Yunjun | 20 March 2019, 21:38:16 UTC | pysarApp: move modify_network before reference_point move the dynamic import from pysar/__init__.py to pysar/workflow/__init__.py to speed up the initiation of scripts used by pysarApp. pysarApp: + move modify_network before reference_point + move stack_interferograms after correct_unwrap_error + move avgSpatialCoh.h5 and maskConnComp.h5 generation to new function: TimeSeriesAnalysis.generate_ifgram_aux_file() + change default `pysar.network.maskFile` value from `maskConnComp.h5` to `no` and remove obsolete maskSpatialCoh.h5 file. + add missing return statement for run_*() utils/plot: change default mask file for avgPhaseVelocity.h5 to `None` instead of `maskSpatialCoh.h5` Do not update maskConnComp.h5 and avgSpatialCoh.h5 within modify_network.py as they are not relavent anymore. | 20 March 2019, 23:08:20 UTC |
| 39c3f4e | Zhang Yunjun | 20 March 2019, 01:18:18 UTC | add process_isce_stack add process_isce_stack.py to run the recipe of ISCE stripmapStack processor. + it read job configuration from cfg file using configparser module + define the 1st version of isce processor option names + add reset_process_directory() to clean the directory before re-run. + add prepare_ALOS() for the SAR data preparation + add prepare_stack() to call stackStripMap.py + NOTE: DEM preparation is NOT included, as it is different in study areas in Japan. + add --bsub option, similar to process_rsmas.py remove obsolete submit_jobs4stripmap_stack.py split_jobs: switch job shell to tcsh to use the same environment as command line | 20 March 2019, 05:00:19 UTC |
| 8869798 | Zhang Yunjun | 19 March 2019, 21:40:59 UTC | add plot_coherence_matrix.ipynb | 19 March 2019, 21:40:59 UTC |
| 106967a | Zhang Yunjun | 19 March 2019, 21:39:24 UTC | Merge pull request #41 from yunjunz/dev notebook: add plot_coherence_matrix | 19 March 2019, 21:39:24 UTC |
| 301855c | Zhang Yunjun | 19 March 2019, 21:36:30 UTC | notebook: add plot_coherence_matrix utils/plot: add ratio argument in auto_figure_size() plot_coherence_matrix: + merge two figures into one with two subplots + add auto figure size calculation update README.md and docs/Notebooks/README.md | 19 March 2019, 21:36:30 UTC |
| 83040e2 | Zhang Yunjun | 19 March 2019, 21:00:49 UTC | plot_coherence_matrix: add networkViewer object | 19 March 2019, 21:00:49 UTC |
| 56bdf12 | Zhang Yunjun | 18 March 2019, 05:50:27 UTC | sh/run_stripmap_stack: adjust to prepRawALOS in yunjunz/dev version bugs fix add pysarApp adjust to prepRawALOS in yunjunz/dev version | 19 March 2019, 01:25:41 UTC |
| 7b8abf9 | Zhang Yunjun | 18 March 2019, 03:53:28 UTC | move unwrap_error* module import inside run_unwrap_error_correction() | 18 March 2019, 03:53:28 UTC |
| 9c245a1 | Zhang Yunjun | 18 March 2019, 03:49:22 UTC | adjust for updated stripmapStack/dev | 18 March 2019, 03:49:22 UTC |
| b43e257 | Zhang Yunjun | 18 March 2019, 02:05:09 UTC | Notebook (#40) * mask: update message * submit*stripmap_stack: update to new run_files | 18 March 2019, 02:05:09 UTC |
| f291b47 | Zhang Yunjun | 17 March 2019, 22:52:55 UTC | adjust for updated FernandinaSenDT128 dataset adjustment for the new version of FernandinaSenDT128 dataset due to the re-calculated HEADING value from prep_isce.py | 17 March 2019, 22:52:55 UTC |
| d4787c5 | David W Grossman | 17 March 2019, 21:25:27 UTC | Eliminate ALL subprocess calls for python scripts from pysarApps.py (#34) * Refactored out easily modifiable subprocess calls * Removed status where possible * move plot result inside run_load_data() and run it if load_complete is False * bugs fixed in read_template2inps() in reference_date.py and timeseries_rms.py | 17 March 2019, 21:25:27 UTC |
| c6e16d9 | Zhang Yunjun | 17 March 2019, 16:57:47 UTC | update nb for stripmapApp_postprocessing | 17 March 2019, 16:57:47 UTC |
| 1f13a8f | Zhang Yunjun | 17 March 2019, 15:17:55 UTC | Merge pull request #39 from leixie-steven/patch-2 bug report for the azimuth angle in prep_isce | 17 March 2019, 15:17:55 UTC |
| fa8281b | Lei | 17 March 2019, 14:49:57 UTC | bug report for the azimuth angle in prep_isce Reading the azimuth angle from the geom_file instead of incident angle for the heading angle conversion. | 17 March 2019, 14:49:57 UTC |
| f5a5a5a | Zhang Yunjun | 17 March 2019, 04:55:46 UTC | utils/readfile: do not use "image_type" metadata from ISCE Do not use the "image_type" metadata from ISCE xml file for the FILE_TYPE metadata, because it is not robust (sometimes unw sometimes bil), use the file extension without rdr or geo, only, instead. | 17 March 2019, 04:55:46 UTC |
| b21c850 | Zhang Yunjun | 16 March 2019, 22:27:13 UTC | bug fix in __init__ | 16 March 2019, 22:27:13 UTC |
| 67293c0 | Zhang Yunjun | 16 March 2019, 21:47:07 UTC | Merge pull request #37 from yunjunz/init_package_update Added automatic importing of pysarApp.py modules when importing pysar | 16 March 2019, 21:47:07 UTC |
| 4695ed3 | Zhang Yunjun | 16 March 2019, 21:46:05 UTC | init: add geocode to __all__ | 16 March 2019, 21:46:05 UTC |
| c37379f | David Grossman | 16 March 2019, 21:37:03 UTC | added automatic importing of pysarApp.py modules when importing pysar | 16 March 2019, 21:37:03 UTC |
