| ba9de4b | Zhang Yunjun | 08 August 2019, 18:34:34 UTC | wrap up for v1.2beta (#178) * Update README.md * Update version.py | 08 August 2019, 18:34:34 UTC |
| 97fc78e | Zhang Yunjun | 08 August 2019, 16:00:44 UTC | add "citing this work" in README (#177) * add "citing this work" in README * suppress matplotlib UserWarning while calling plotting scripts. * add GPS related options back to tsview.py to avoid undefined arguments error, but raise an exception in tsview.py while --gps-comp option is input. * update plotting script usage in smallbaselineApp.ipynb * fix bug of the relative path of data files in save_kmz | 08 August 2019, 16:00:44 UTC |
| c2750e0 | Zhang Yunjun | 07 August 2019, 23:08:39 UTC | fix bug of mask from geometry in dem_error.py (#176) dem_error: ignore pixels with NaN value in any of the geometry dataset prep_aria: add more notes in example smallbaselineApp: move waterMask.h5 generation from step `load_data` to `modify_network` turn ON saving to HDF-EOS5 in testing | 07 August 2019, 23:08:39 UTC |
| aac5999 | Zhang Yunjun | 05 August 2019, 04:17:06 UTC | add DOI of the paper pre-print + remove obsolete dir_*.ipynb and update directory structure link smallbaselineApp.ipynb + prep_aria: print out dataset type and size | 07 August 2019, 17:59:44 UTC |
| cae87e5 | Zhang Yunjun | 05 August 2019, 03:56:54 UTC | add docs/dir_structure.md (#170) * Create dir_structure.md * Update mkdocs.yml * Update save_hdfeos5.py for HDF-EOS5 format reference link | 05 August 2019, 03:56:54 UTC |
| d48873e | Yunmeng Cao | 04 August 2019, 18:29:41 UTC | update lookup_geo2radar.py using scipy.interpolate.griddata (#167) * using scipy.interpolate.griddata to convert the lookup-table * support parallel processing | 04 August 2019, 18:29:41 UTC |
| fea1834 | Zhang Yunjun | 02 August 2019, 18:05:53 UTC | add docs/conda_env.yml for mintpy environment installation update installation note for mintpy environment | 02 August 2019, 19:10:15 UTC |
| c3ed146 | Zhang Yunjun | 01 August 2019, 22:11:00 UTC | add relevant literature to example datasets | 02 August 2019, 19:10:15 UTC |
| 70387ba | Zhang Yunjun | 01 August 2019, 21:41:02 UTC | prep_aria: convert azAngle from ARIA to ISCE style (#166) * prep_aria: convert azAngle from ARIA to ISCE style * update comments while plotting GPS vs InSAR | 01 August 2019, 21:41:02 UTC |
| bc99d1f | Yunmeng Cao | 01 August 2019, 01:54:21 UTC | convert lookup-tables under geo-coord to radar-coord (#144) * add lookup_geo2radar.py to convert the Geo-coordinates based lookup-table (GAMMA, ROI_PAC) into the Radar-coordinates based lookup-table (ISCE). * add utils.get_lat_lon_rdc() to generate lats/lons under radar-coord when latitude/longitude is not available, taking into account the tilted geometry of radar-coded file. * use utils.get_lat_lon_rdc() in tropo_pyaps3.py for radar-coded products with lookup table in geo-coordinates, for GAMMA and ROIPAC products. | 01 August 2019, 01:54:21 UTC |
| f17490e | Zhang Yunjun | 31 July 2019, 22:35:54 UTC | ifgram_inversion: comment out ts_std to save memory (#163) + commenting out ts_std dataset to reduce memory usage + remove obsolete --split-file option to simplify the code | 31 July 2019, 22:35:54 UTC |
| 1aa5881 | Zhang Yunjun | 31 July 2019, 03:16:21 UTC | check azimuthAngle while plotting gps vs insar (#161) * update comments for plot_transection.py in smallbaselineApp * utils.get_geometry_file() support checking of a list of datasets * check both incidenceAngle and azimuthAngle while calling utils.plot.plot_gps() * prep_aria: do not create azimuthAngle dataset if no azAngle file is input * stackDict: remove UNIT metadata while loading ifgramStack and geometry* files * disable GPS related options in tsview.py for now because "insar displacement vs gps displacement" is not implemented yet. | 31 July 2019, 03:16:21 UTC |
| 9d9db53 | Zhang Yunjun | 30 July 2019, 21:04:07 UTC | specify custom ifgram file pattern while calling prep_isce.py from load_data.py prep_isce: change default --file-pattern argument value to *.unw only becuase *.rsc file for cor file is not necessary | 30 July 2019, 21:06:03 UTC |
| 823c8cc | Zhang Yunjun | 29 July 2019, 17:23:24 UTC | load_gbis: add optimal model parameters and convert model x y into longitude and latitude make MODEL_MIN_HEIGHT as optional metadata | 30 July 2019, 21:06:03 UTC |
| 4495dea | Zhang Yunjun | 28 July 2019, 23:26:33 UTC | version: hide subprocess stderr message (#159) hide git error message if mintpy is not installed through git clone. | 28 July 2019, 23:26:33 UTC |
| 805dc29 | Zhang Yunjun | 28 July 2019, 20:02:27 UTC | Update version | 28 July 2019, 20:25:00 UTC |
| b72468c | Zhang Yunjun | 28 July 2019, 19:50:11 UTC | pre-release wrap up (#157) update template comments in individual scripts Update version.py | 28 July 2019, 19:50:11 UTC |
| 4e7c5c0 | Zhang Yunjun | 28 July 2019, 14:07:46 UTC | fix bug for smallbaselineApp.py -g option (#156) * fix bug for smallbaselineApp.py -g option when no custom template and no default template * mintpy.troposphricDelay.weatherModel change default from ECMWF to ERA5 * fix typo in prep_aria.py | 28 July 2019, 14:07:46 UTC |
| 63a60d7 | Zhang Yunjun | 27 July 2019, 01:46:34 UTC | prep_aria: grab NoDataValue for interferogram data grab NoDataValue for unwrapPhase, coherence and connectComponent with gdal function, instead of using hardwired value for connectComponent only; and translate them all to zero, to be consistent with isce and mintpy. | 28 July 2019, 03:24:17 UTC |
| ac25d49 | Zhang Yunjun | 26 July 2019, 22:53:59 UTC | prep_aria: mask out invalid pixels in waterMask Grab mask of invalid pixels from incidence angle and use it to maskout pixels in water mask too. This benefits 1) the average spatial coherence calculation, improving the performance of coherence-based network modification; 2) one way of handling the no-data because water mask is used as a basic mask in mintpy. | 28 July 2019, 03:24:17 UTC |
| 736d087 | Zhang Yunjun | 26 July 2019, 22:25:54 UTC | prep_aria: add waterMask prep_aria.py + add --water-mask option to load watermask.msk file into geometryGeo.h5 + add ARIA-tools example commands into usage view.py: fix bug of saving figure to file while runing command in a different dir than the input file. | 26 July 2019, 22:32:57 UTC |
| 3bd45f4 | Zhang Yunjun | 26 July 2019, 18:03:33 UTC | plot_coherence_matrix: support running outside of mintpy dir | 26 July 2019, 18:07:00 UTC |
| 77a5a12 | Zhang Yunjun | 26 July 2019, 05:25:38 UTC | remove masked out pixel while plotting transection + ut.transect_yx() remove masked out pixels. + bug fix for plot_coherence_matrix.py + add docker cmd and link to installation.md | 26 July 2019, 16:17:24 UTC |
| 4ee67f9 | Zhang Yunjun | 26 July 2019, 05:13:14 UTC | connectComponent: byte to int16 (#150) * Update contributing docs * connectComponent: byte to int16 prep_aria.py and objects/stackDict.py: + change the data type of connectComponent dataset from BYTE to INT16 to support up to 32767 reliable regions/connected components for single interferograms. + turn ON compression of "lzf" while writing connectComponent to HDF5 file to save disk space prep_aria.py: + add FILE_TYPE metadata + add MODIFICATION_TIME metadata to 3D datasets + turn ON chunks while writing HDF5 to speedup file IO + turn ON maxshape for 3D datasets to support updatable ifgramStack.h5: feature not used anyway yet; just to be consistent with mintpy. update default plot settings for connectComponent dataset in view.py and plot.py | 26 July 2019, 05:13:14 UTC |
| 4745acf | Zhang Yunjun | 25 July 2019, 22:21:22 UTC | bug fixed in test_smallbaselineApp.py Should not calling smallbaselineApp.py through its main() in a loop which has different insar processors, becuase it changes the global variable datasetName2templateKey during load_data.read_inps_dict2geometry_dict_object() | 25 July 2019, 22:45:28 UTC |
| ecf8d3e | Zhang Yunjun | 25 July 2019, 21:41:16 UTC | speedup test_smallbaselineApp.py (#147) * speedup test_smallbaselineApp.py add 3 template files into local `test` directory and turn OFF pixelwise inversion for both invert_network and correct_topography step to speed up the testing process. add --test-pyaps option and keep existing ECMWF file * move unittestGalapagos* to test dir move unittestGalapagosSenDT128.template as a more appropriate location remove files in mintpy.troposphericDelay.weatherModel = ECMWF from docs/examples/input_files because 1) they are not recommended for best performance and 2) they are copies of them in test dir now with fast processing setup. | 25 July 2019, 21:41:16 UTC |
| ffe8f56 | Zhang Yunjun | 25 July 2019, 21:30:38 UTC | bug fix for unwrap_erro_bridging if num_label > 10 (#146) objects/conncomp.py: + fix bug of connection identification confusion when there are more than 10 reliable connected components in the dataset. + more comments on get_all_bridges() and find_mst_bridge() save_roipac.py: support ouptut connectComponent from ifgramStack.h5 file utils/readfile: more generic reading for binary data files by assigning some data structure info before checking InSAR processor utils/writefile: bug fixed for writing byte and bool type of data file specify ECMWF (ERAI) as the tropo dataset for test example. They should be changed to ERA5 in the future. | 25 July 2019, 21:30:38 UTC |
| 857063f | Zhang Yunjun | 25 July 2019, 20:44:20 UTC | prep_aria: add more metadata (#139) prep_aria: + comment out skimage.transform.resize() because the updated ariaTSsteup.py produces the same size DEM file as the interferogram stack, this eliminates the need of installing scikit-image module while running prep_aria.py with the `ARIA-tools` python environment. + copy over all metadata from unwrappedPhase for the sake of completeness, except for Dates and bperp + add metadata extraction for: - ANTENNA_SIDE - HEADING (hardwired to typical asc/desc track values) - RANGE_PIXEL_SIZE - LON/LAT_REF1/2/3/4 - CENTER_LINE_UTC - ORBIT_DIRECTION + write all ifgrams in the sorted order of date1_date2 with date1 < date2 + add -a/--az-angle option + more print out message for file IO + update example utils/ptime: remove obsolete ifgram_date_list() to that ptime.py can be independent from h5py module add ARIA format link to README.md Update indentation in smallbaselineApp.cfg | 25 July 2019, 20:44:20 UTC |
| 9ac8b04 | Falk Amelung | 25 July 2019, 19:42:49 UTC | Add files via upload | 25 July 2019, 19:51:05 UTC |
| cbe79b3 | Falk Amelung | 24 July 2019, 05:35:59 UTC | fixed typo | 24 July 2019, 14:39:08 UTC |
| 7e7a554 | Zhang Yunjun | 24 July 2019, 03:50:06 UTC | improved notebooks for 3D time-series simulation (#136) * update link for example .tcshrc file * readfile: add backup parameter for unknown binary file format * improved notebooks for 3D time-series simulation + fix bug of NaN fill_value while geocoding data in int + fix bug of colormap in plot.plot_rotate_diag_coherence_matrix() + more robust readfile.get_hdf5_compression() + more robust coord unit checking in view.py + get rid of more pysar in the documents + remove obsolete docs/_includes/visit_location.html + remove obsolete docs/paper/Fig_S07*.ipynb, because it's covered in Fig_12*.ipynb + remove obsolete docs/paper/phaseCorrection_order/phase_correction.sh because it's now shown in X_phaseCorrection*.ipynb | 24 July 2019, 03:50:06 UTC |
| 84682cb | ehavazli | 23 July 2019, 20:31:00 UTC | bug fix: prep_aria.py (#135) * adding geometry files - added the option to load DEM file * add DEM to the geometry file track no-data-value with gdal and set to Nan * minor bug fix - bug fixed in reading STARTING_RANGE metadata * bug fix: prep_aria.py - NoData value is tracked and converted to 0 for DEM | 23 July 2019, 20:30:59 UTC |
| 50cc493 | Zhang Yunjun | 23 July 2019, 20:07:43 UTC | plot_gps: search/use geometry file for incAngle if available (#134) * plot_gps: search/use geometry file for incAngle if available + utils.plot.plot_gps(): search existing geometry files with incidenceAngle dataset and use it to convert GPS enu to LOS. + utils.utils1.get_file_list(): bug fix related with coord argument + utils.utils1.get_geometry_file(): add work_dir to support searching while runing script not in the directory of the input file. * remove up option for --gps-comp * fix format bug suggested by codacy | 23 July 2019, 20:07:43 UTC |
| e3e74ce | Zhang Yunjun | 23 July 2019, 05:31:52 UTC | remove obsolete legacy files | 23 July 2019, 17:25:02 UTC |
| 2b567be | Zhang Yunjun | 23 July 2019, 05:27:20 UTC | bug fix for mpl ColorbarBase + fix bug related with latest matplotlib.ColorbarBase by replaceing str type cmap argument with LinearSegmentedColormap cmap argument + fix remaining "truncate_RdBu" to the new convention of "RdBu_truncate" + remove duplicated plot_colorbar() and generate_cbar_element() from save_kmz_timesereis.py and call it from save_kmz.py directly. | 23 July 2019, 17:25:02 UTC |
| cad03ae | Zhang Yunjun | 23 July 2019, 02:44:20 UTC | update note to install basemap and pykml + use https://github.com/tylere/pykml.git for the updated python3 support + use https://github.com/matplotlib/basemap.git for bug fixed problem with PROJ_LIB + use "pip install" instead of "python setup.py install" for one line simplicity | 23 July 2019, 03:04:31 UTC |
| 26dd03d | Zhang Yunjun | 23 July 2019, 00:07:05 UTC | update macports installation by @hfattahi + ports.txt update gcc5 to gcc7 + installation.md: add commands to install pyresample and pykdtree, which are not included in macports | 23 July 2019, 03:04:31 UTC |
| e26d8a1 | Zhang Yunjun | 22 July 2019, 19:16:28 UTC | load_data: use auto path if mintpy.load.unwFile == auto | 23 July 2019, 03:04:31 UTC |
| 0ca6ea3 | Zhang Yunjun | 22 July 2019, 19:10:22 UTC | update test data url | 23 July 2019, 03:04:31 UTC |
| 8f0e755 | Zhang Yunjun | 21 July 2019, 22:52:43 UTC | move default plot setting to defaults dir | 22 July 2019, 16:15:03 UTC |
| 710a1c3 | Zhang Yunjun | 20 July 2019, 22:10:35 UTC | GBIS support: add height and MODEL_MIN_HEIGHT | 22 July 2019, 16:15:03 UTC |
| d0076d2 | Zhang Yunjun | 19 July 2019, 01:15:17 UTC | more returns of prep_isce.extract_*_metadata() for easy inspection adjust docs/resources/colormaps/README.md following codacy suggestions | 22 July 2019, 16:15:03 UTC |
| 0bdf4b5 | sanghoonhong | 19 July 2019, 02:14:49 UTC | update ALOS2 sensor information (#129) * alos2 case added. Values should be checked, but it should work | 19 July 2019, 02:14:49 UTC |
| 7cc9e3b | Zhang Yunjun | 18 July 2019, 15:42:00 UTC | more colormaps from GMT and scientific-colormaps + support local GMT cpt colormaps for macOS user if GMT is installed with macports + add several colormaps from Scientific Color-Maps project by Fabio Crameri + update docs/resources/colormaps/README.md with images for easy navigation + move ColormapExt class from utils/plot.py to objects/colors.py - import objects.colors in utils/plot.py so that all previous usage won't be affected. - change "truncate_" prefix to "_truncate" suffix for derivative colormap for consistency - change "{int}" suffix to "{_int}" suffix for derivative colormap for consistency - modify read_cpt_file() to support cpt files from GMT - add check_input_colormap_name() to simplify the class workflow. - support combined derivative settings in get_colormap() + move global variable mplColors to objects/colors, and import it in utils/plot.py, so that all previous usage won't be affected. | 19 July 2019, 00:26:46 UTC |
| 1495360 | Andre Theron | 18 July 2019, 15:22:16 UTC | Initial Docker image with config file (#126) * Add docker/Dockerfile and docker/README.md * Init of docker as run option * Revert --no-installs-reccomend which breaks build * Update installation.md | 18 July 2019, 15:22:16 UTC |
| 7e4a834 | Zhang Yunjun | 17 July 2019, 01:39:46 UTC | support GAMMA lookup file with coordinates in meters + prep_gamma.extract_metadata4geometry_geo(): calculate Y_FIST from corner/post_east metadata + geocode.metadata_radar2geo(): use X/Y_UNIT from lookup file metadata if they exists + view.plot_slice(): add code to plot geo-coord in meters based on the code for radar-coord data and adjust for: - the extent - axis ticklabel rotation + add SNAP processor to doc + switch GAM for FernandinaSenDT128.txt from ERAI to ERA5 | 17 July 2019, 18:00:24 UTC |
| b156439 | Zhang Yunjun | 17 July 2019, 00:58:47 UTC | load_data: temp fix the file size inconsistency for SNAP products Add check_files_size() to check the file size of a list of files. Adjust read_subset_box() to check the bounding box if 1) no input subset and 2) processor is snap. | 17 July 2019, 01:02:39 UTC |
| 7c6b1bc | sanghoonhong | 16 July 2019, 05:55:59 UTC | fixed network.py for only one interferogram | 17 July 2019, 00:42:11 UTC |
| a28b4da | Zhang Yunjun | 16 July 2019, 19:28:14 UTC | prep_snap: use *.img file as input instead of *.dim file (#122) * Update load_gbis.py * prep_snap: use *.img file as input instead of *.dim file + use *.img data file as input instead of *.dim file for prep_snap.py to facilitate the code in load_data.py. + minor format changes for the following metadata so that the "update" mode works: - PLATFORM - X/Y_FIRST/STEP | 16 July 2019, 19:28:14 UTC |
| 8199c09 | Zhang Yunjun | 15 July 2019, 03:58:49 UTC | add load_gbis.py add load_gbis.py to convert GBIS inversion result mat file into HDF5 files. adjust view.py to support GBIS hdf5 file. | 15 July 2019, 19:01:04 UTC |
| eef7b8a | Zhang Yunjun | 14 July 2019, 03:20:27 UTC | deep integrated plot_transection.py with view.py plot_transection.py: + add get_view_cmd() to assemble an view.py command to plot the map axes based on the input argument of plot_transection.py. + merge both the inps from plot_transection.py and the inps from view.py into the objects, to truely share the same setting, to take advantage of existing auto setting from view.py. + bug fixed for --save option smallbaselineApp.py: move the copy/update part of plot_smallbaselineApp.sh from plot_result() to startup() | 15 July 2019, 19:01:04 UTC |
| d974ec6 | Zhang Yunjun | 13 July 2019, 19:46:58 UTC | add circle CI badge | 13 July 2019, 19:57:48 UTC |
| 5d9a348 | Zhang Yunjun | 13 July 2019, 19:13:11 UTC | initial circle ci test (#119) * initial circle ci test * update comments for mintpy.troposphericDelay.looks option2 * Update hdfeos5.md | 13 July 2019, 19:13:11 UTC |
| 34f8fb1 | Zhang Yunjun | 12 July 2019, 21:32:47 UTC | update comments for mintpy.troposphericDelay.looks option | 12 July 2019, 21:36:29 UTC |
| 9131516 | Zhang Yunjun | 12 July 2019, 21:05:42 UTC | potential bug fix for resize() by @ehavazli + turn preserve_range=True while calling skimage.transform.resize(), otherwise, it alters the data if input data is not in float32. Identified and fixed by @ehavazli + fix bugs while calling main() from view.py, tsview.py, plot_transection.py and plot_coherence_matrix().py | 12 July 2019, 21:36:29 UTC |
| b63719f | Zhang Yunjun | 12 July 2019, 20:39:55 UTC | improved transection plot + rename transect.py to plot_transection.py + re-factor plot_transection.py based on the style of tsview.py and plot_coherence_matrix.py - add transectionViewer() class for interactive profile checking - show profile start/end point for easy tracking - drop DEM support for now, might add it back in the future. The corresponding old code is in legacy/transect_legacy2.py + add notebook tutorial for plot_transection.py, similar as plot_coherence_matrix.py + move transect_yx/lalo() to utils/utils.py for easy calling. | 12 July 2019, 21:36:29 UTC |
| 670b3b5 | Zhang Yunjun | 11 July 2019, 20:11:11 UTC | save_gbis: add mask to mat file save_gbis: + add --out-dir option to specify the output directory. This is used only if --output is not specified + add Mask 2D matrix to GBIS mat data file to facilirate GBIS2MINTPY conversion. | 12 July 2019, 21:36:29 UTC |
| c037bcb | Zhang Yunjun | 11 July 2019, 16:54:29 UTC | plot_network: support ifgramStack_coherence_spatialAvg.txt objects/stack.ifgramStack.get_perp_baseline_timeseries(): simplied inversion using design matrix A instead of B plot_network: + remove obsolete option --baseline for bl_list.txt since select_netowk.py can plot too. + remote --list option because info.py --date --show option can do it too and do it better. + read pbase, date, date12 and coherence info from ifgramStack_coherence_spatialAvg.txt | 11 July 2019, 16:55:37 UTC |
| c0dd2fa | Zhang Yunjun | 09 July 2019, 03:54:34 UTC | raise exception if no triangles found in ifgramStack.get_design_matrix4triplet() | 11 July 2019, 16:55:37 UTC |
| a902aa4 | Zhang Yunjun | 07 July 2019, 21:18:55 UTC | asc_desc2horz_vert: switch output filenames | 11 July 2019, 16:55:37 UTC |
| 1eee625 | Zhang Yunjun | 07 July 2019, 00:01:54 UTC | improved save_roipac/gbis.py (#114) + save_roipac.py: - for velocity input file, change displacement time length from one year to DATE12 - for velocity input file, use DATE12 for auto output filename - add -mask option to be able to mask out input files - add --ref-lalo option to change reference point in lat/lon + save_gbis.py: - add --nodisplay option - use project_name for default output filename base - adjust plot details + plot_coherence_matrix.py: - bugs fixed - adjust print out message while selecting points + timeseries2velocity.py: sort excluded dates in the metadata + objects/sensor.project_name2sensor_name(): use `os.sep` instead of `/` for path split + utils/plot.read_date_txt(): set default output to [] and check existance of input file + utils/utils.read_timeseries_lalo/yx(): add unit argument | 07 July 2019, 00:01:54 UTC |
| 3f45e2b | Zhang Yunjun | 04 July 2019, 03:42:53 UTC | tsview: update slider while pressing left / right arrow key (#113) * tsview: update slider while pressing left / right arrow key to advance to the previous / next image. * save_gbis: update colormap for plot | 04 July 2019, 03:42:53 UTC |
| 74ce1bc | ehavazli | 03 July 2019, 20:43:35 UTC | fixed indent bug | 03 July 2019, 21:18:46 UTC |
| 2d078dc | Zhang Yunjun | 01 July 2019, 00:54:38 UTC | add save_gbis.py to prepare data for GBIS modeling | 01 July 2019, 19:15:48 UTC |
| f0b1e96 | Zhang Yunjun | 28 June 2019, 20:06:16 UTC | view.py: support background DEM smaller than input data objects/coord: check_box_within_data_coverage(): add print_msg to control the message output utils/plot:read_dem(): support DEM file that does not cover the input geo_box completely by filling the outside area with NaN | 28 June 2019, 20:07:18 UTC |
| 40a1a62 | Zhang Yunjun | 28 June 2019, 18:10:40 UTC | update doc for asc_desc2horz_vert.py (#109) * update docs/examples/input_files/README * Update asc_desc2horz_vert.py | 28 June 2019, 18:10:40 UTC |
| 49a0756 | Zhang Yunjun | 26 June 2019, 14:22:15 UTC | example template for ISCE/stripmapStack | 26 June 2019, 14:30:38 UTC |
| f307526 | Zhang Yunjun | 24 June 2019, 19:43:05 UTC | plot_network: fix bug in colormap plot_network: + add --cmap-vlist option to replace the -m, -M and --threshold options. + more robust default color jump utils/plot.plot_network(): use ColormapExt() for the truncate_* colormap directly. modify_network: remove --plot for more simple main() | 24 June 2019, 19:44:12 UTC |
| 9471a30 | Zhang Yunjun | 19 June 2019, 21:26:33 UTC | assign no-data pixel to zero for ARIA connComp | 19 June 2019, 21:48:05 UTC |
| 18bfad0 | Zhang Yunjun | 19 June 2019, 19:44:09 UTC | refactoring save_kmz_timeseries 2 + get rid of global variables + use `shutil` and `os` modules to create/move files/directories instead of calling shell commands using os.system() + support full path, so that the script can be ran in other directories. | 19 June 2019, 20:36:50 UTC |
| 7bcb825 | Andre Theron | 19 June 2019, 20:32:56 UTC | Init of basic snap (BEAM-DIMAP) ingest functionality (#101) + add `prep_snap.py` based on `prep_isce` and `prep_roipac` to extract metadata from interferogram/coherence/unwrapped/elevation .dim (BEAM-DIMAP format) files produced by ESA SNAP and writes a RSC file in ROIPAC format in the same folder as the .dim file. + add `get_ellpsoid_local_radius()` in prep_snap to extract HEIGHT and EARTH_RADIUS from orbit parameters using code adapted and simplified from `isce.isceobj.Planet` in ISCE2. + add `snap` as processor in `load_data`. | 19 June 2019, 20:32:56 UTC |
| 247461d | Zhang Yunjun | 19 June 2019, 16:15:14 UTC | fix bug of data type while reading isce .conncomp utils/readfile: fix bug while converting byte data type for ISCE file objects/stackDict: change default connectComponent data type from bool to byte (int8) while loading from binary files using load_data.py update comments accordingly | 19 June 2019, 16:24:03 UTC |
| 6aaafad | Zhang Yunjun | 19 June 2019, 15:10:55 UTC | fix typo in doc for datatype of connectComponent connectComponent is read and saved as np.bool_ format, not int16. | 19 June 2019, 15:18:50 UTC |
| dcd8ce1 | Zhang Yunjun | 18 June 2019, 19:19:57 UTC | remove duplicated get_lat_lon() + move get_lat_lon() to utils/utils0.py and remove all the other duplicated copies. + save_kmz_ts*: adjust parsing options | 19 June 2019, 15:18:50 UTC |
| 9dce3cb | Zhang Yunjun | 18 June 2019, 05:53:32 UTC | refactoring save_kmz_timeseries.py + bug fixed for masking with input --mask file. + add --steps and --lods options to be able to customize the details setup + check file existance and coordinates of input files + add get_aux_filename() for default aux files + adjust split_into_sub_boxes() and get_boxes4deforming_area() to take step as argument instead of win_size + adjust print out message in the terminal + clean the following functions: - create_regionalized_networklinks_file() - generate_network_link() - main() | 18 June 2019, 15:52:19 UTC |
| bb5f393 | Zhang Yunjun | 17 June 2019, 16:08:21 UTC | add docs/examples/*/README.md docs/examples + add README file with nbviewer links to notebooks in nbviewer.com for `applications` and `simulations` to load notebook fast on the web docs/resources + remove obsolete pysar logo files save_roipac.py + grab WAVELENGTH metadata only when it's available + if user input custom output filename, use it to determined the FILE_TYPE metadata + get rid of SUBSET_X/YMIN/MAX metadata utils/writefile.py + enforce float32 for DATA_TYPE metadata while writing .trans file + enforce float32 output data type while calling write_float32() view.py + more comments for GPS related example. | 18 June 2019, 01:51:27 UTC |
| 6178799 | ehavazli | 17 June 2019, 23:09:36 UTC | unit in legend label has been changed from "cm/year" to given unit in the inputs. If no unit is give, the default is still "cm/year" | 18 June 2019, 01:36:17 UTC |
| 074504e | Scott Staniewicz | 18 June 2019, 01:26:38 UTC | fix mkdir typos in installation.md | 18 June 2019, 01:31:19 UTC |
| a9940c4 | Zhang Yunjun | 14 June 2019, 20:18:08 UTC | tsview: support slide using left/right key tsview: add on_key_event() to timeseriesViewer object to support slide image using left and right key on the keyboard, to facilitate detailed interpretation on displacement time-series. add jupyter notebook for image_slider diff: fix bug when ts_file2 has more dates than ts_file1 | 17 June 2019, 16:04:46 UTC |
| cde74c5 | ehavazli | 13 June 2019, 23:44:03 UTC | bperp is read from the metadata bperp calculation function and required dirs are removed | 14 June 2019, 01:24:06 UTC |
| 4b5d684 | Zhang Yunjun | 14 June 2019, 00:54:30 UTC | improved plot_coherence_matrix.py plot_coherence_matrix: + add `--tcoh` option to display temporal coherence of the pixel in the axis title + add `--template` option to not show excluded interferograms due to pixel-wise masking based on coherence during network inversion, so that the upper and lower triangles shows the exact situation used in the network inversion. + add `--cmap-vlist` option to customized truncated colromap tsview: auto transparent map view utils/plot: + class ColormapExt: bug fixed in truncate_* colormaps + plot_coherence_matrix(): support colormap object input in the plot_dict argument | 14 June 2019, 00:57:02 UTC |
| 9b5c9bd | Zhang Yunjun | 13 June 2019, 15:43:25 UTC | mintpy.residualRms.* --> mintpy.residualRMS.* update google earth link in docs/tutorials/README | 14 June 2019, 00:57:02 UTC |
| 0d4942a | Zhang Yunjun | 13 June 2019, 22:51:16 UTC | Merge branch 'hfattahi-master' | 13 June 2019, 22:51:16 UTC |
| 737dd55 | Heresh | 13 June 2019, 22:09:41 UTC | merge with upstream | 13 June 2019, 22:09:41 UTC |
| a78b1f3 | Heresh | 13 June 2019, 21:57:26 UTC | fixing the sign of the unwrapped phase | 13 June 2019, 21:57:26 UTC |
| 3d90ac9 | Zhang Yunjun | 12 June 2019, 18:39:42 UTC | ifg_inv: convert NaN to zero ifgram_inversion: convert all NaN values in phase, coherence and mask data to zero, to avoid RuntimeWarning message during math operation. Since zero is ignored in the inversion, it won't has effect on the result. view: + turn ON reference point display by default for multiple subplots + fix bug of coordinates in status bar for radar coord, as it starts from -0.5 in the UL corner. This is introduced from last commit. + bug fix while showing heigt in coordinates status bar ptime: sorting in read_date_list(), otherwise, it causes unexpected behavior for --ex option in tsview.py | 13 June 2019, 02:17:48 UTC |
| 2d3d934 | Zhang Yunjun | 12 June 2019, 19:12:56 UTC | readfile: support SNAP BEAM-DIMAP format (#89) * readfile: support SNAP BEAM-DIMAP format utils/readfile: + read_binary(): add positional argument shape, to avoid calling read_attribute() inside, to gain more independence; and adjust its usage in utils/readfile.py and mask.py. + adjust read_attribute() and read_binary_file() to support the following SNAP unw, cor, int and dem data files * add docs/examples/dev/read_snap_img.ipynb * consistent sub-pixel coordinate rule: details in objects/coord.py comments. * reference_point: fix a bug by not using existing REF_Y/X if they are out of the coverage (after subsetting for example). * ifgram_inversion: suppress warning message while calculating mask of Nan and zero phases * update Python version in docs from 3.5 to 3.6. * dem_error: + skip pixel with nan value in any interferogram, instead of in all interferograms before. + ignore input non-existed default exclude_date.txt file * ptime/read_date_list(): support input list contains non-existed text file. * view: shorted coordinates bar | 12 June 2019, 19:12:56 UTC |
| 5333468 | Zhang Yunjun | 11 June 2019, 00:09:39 UTC | remove gdal>=3.0 from docs/conda.txt (#88) * Update conda.txt * ifg_inv: comment out unused variable Astd * suppress mplDeprecation warning in view.py | 11 June 2019, 00:09:39 UTC |
| da4f3dc | Zhang Yunjun | 10 June 2019, 21:01:32 UTC | add cartopy notebook notebook draft of using cartopy for plotting in geo coordinates to replace basemap. It works fine in notebook, but failed when tranferring into *.py script, not clear on the reason yet. | 10 June 2019, 21:03:35 UTC |
| 7be64f8 | Zhang Yunjun | 10 June 2019, 00:28:54 UTC | bugs fix (#86) * mkdocs: bug fixed for repo_url * installation: new fix for PROJ_LIB (by piyushrpt) | 10 June 2019, 00:28:54 UTC |
| f207fdd | Zhang Yunjun | 08 June 2019, 00:09:02 UTC | initial https://mintpy.readthedocs.io + setup mintpy.readthedocs.io + add mkdocs.yml and readthedocs.yml + move the following files from root to docs - requirements.txt - CONTRIBUTING.md + move the following files from Wiki to docs - api/attributes.md - api/coord.md - api/doc_generation.md - api/Doxyfile - api/latex.sty - google_earth.md - hdfeos5.md + add the following files in docs - references.md + move the following files out of github repo - docs/resources/coord_index.png - docs/resources/FernandinaSenDT128_POI.jpg - docs/resources/KujuAlosAT422F650_vel.jpg - docs/resources/WellsEnvD2T399_CO_POI.jpg - docs/resources/web_viewer_screenshot.png | 09 June 2019, 17:15:09 UTC |
| d21cb73 | Zhang Yunjun | 07 June 2019, 02:05:15 UTC | Update download button link on github pages | 09 June 2019, 17:15:09 UTC |
| b17a01d | Zhang Yunjun | 08 June 2019, 16:36:47 UTC | Update conda.txt | 08 June 2019, 17:09:12 UTC |
| 37863c7 | Zhang Yunjun | 07 June 2019, 03:00:35 UTC | docs/paper: add markdown description (#82) * Update installation.md * Update installation.md * Update share.html * Update README.md * docs/paper: add markdown description | 07 June 2019, 03:00:35 UTC |
| 4eb3fe1 | Zhang Yunjun | 07 June 2019, 00:21:50 UTC | fixed link for license and sh scripts (#81) * Update README.md * Update README.md | 07 June 2019, 00:21:50 UTC |
| b2757f0 | Zhang Yunjun | 07 June 2019, 00:03:45 UTC | link fixed for docs/README.md (#80) * Update README.md * Update README.md | 07 June 2019, 00:03:45 UTC |
| d171ca2 | Zhang Yunjun | 06 June 2019, 23:40:29 UTC | GitHub Pages: move files to docs/ (#79) Move the files related with github pages from root to docs directory, for more simple structure. Add github user name (insarlab) to the page title. | 06 June 2019, 23:40:29 UTC |
| 3438022 | Zhang Yunjun | 06 June 2019, 22:58:02 UTC | smallbaselineApp: add mintpy.topographicResidual.pixelwiseGeometry option 1. add mintpy.topographicResidual.pixelwiseGeometry option to speedup the DEM error correction step [turned OFF by defalut] 2. add example in dem_error.py to generate updated/corrected DEM file 3. save_roipac: get rid of the starting "." in the dataset name if output file is HDF5 file. 4. add: ignore dataset name if input file is single dataset, to be able to support input files without different dataset names. | 06 June 2019, 22:59:44 UTC |
| 8595ce0 | Zhang Yunjun | 06 June 2019, 21:00:34 UTC | unwrap_error_bridging: use input bridgePtsRadius 1. use input custom bridge endpoint radius for phase difference calculate. 2. change default bridgePtsRadius value from 150 to 50 pixels 3. more comments on defaults/smallbaselineApp.cfg | 06 June 2019, 21:55:53 UTC |
| 269bc76 | Zhang Yunjun | 05 June 2019, 21:30:16 UTC | bugs fix for geo dataset without incidence angle file | 06 June 2019, 21:55:53 UTC |
