| a7bc68f | rzinke | 10 January 2020, 04:28:41 UTC | Added geos and basemap as conda packages to conda_env.yml (#262) * Added basemap to conda_env.yml file and removed pip install basemap. These modifications intended to fix problems with pip finding geos libs. * add basemap to conda.txt * update installation.md with basemap from conda | 10 January 2020, 04:28:41 UTC |
| 67577b6 | Zhang Yunjun | 08 January 2020, 05:37:44 UTC | adjust cmy to green in center + adjust cmy colormap to be green in the center and orange for positive value by default. + update colormap file url + bugs fix + suppress matplotlib user warning in plot_network.py | 08 January 2020, 21:04:25 UTC |
| 3536098 | Zhang Yunjun | 08 January 2020, 01:54:15 UTC | add cyclic colormap - cmy | 08 January 2020, 05:35:27 UTC |
| 867b73a | Zhang Yunjun | 08 January 2020, 01:29:26 UTC | tropo_pyaps3: support delay calculation without ref_y/x diff.py: support the second input file without REF_X/Y info tropo_pyaps3.py: + change ref_y/x info optional for delay calculation. + add 'REF_DATE' to the delay file + rename 'trop_*' to 'tropo_*' for better readability. fractal.py: slight improvement on the speed. | 08 January 2020, 05:35:27 UTC |
| 52727ec | Zhang Yunjun | 07 January 2020, 02:01:52 UTC | prep_isce: use az/rgResolution from S1 product definition replace the previous hardwired S1 spaital resolution value with the value from the product definition, which results in a rg/az_fact value larger than 1. | 08 January 2020, 05:35:27 UTC |
| 1105593 | Zhang Yunjun | 06 January 2020, 06:42:19 UTC | auto fig title: keep binary file ext plot.auto_figure_title(): for binary file (non HDF5 file), use the full basename of input file, including the file extension, as the default output figure name, in order to better support isce binary file plotting. | 08 January 2020, 05:35:27 UTC |
| 8189ad1 | Zhang Yunjun | 06 January 2020, 03:12:48 UTC | readfile: easy read int/magnitude + support reading the magnitude of .int file through datasetName + more generic band1/2/3... in get_slice_list() + respect UNIT grab from manually input datasetName more than the existing UNIT metadata | 08 January 2020, 05:35:27 UTC |
| d2173b0 | Zhang Yunjun | 03 January 2020, 07:20:21 UTC | fractal: adaptive p0 scaling factor adapt p0 value internally instead of the previously fixed scale value so that the input p0 is equal to C0 from the check_power_spectrum(). check_power_spectrum_1d() use the square part of the input data with dimension as a power of 2, for more robust performance. | 04 January 2020, 01:08:35 UTC |
| d0259da | Zhang Yunjun | 01 January 2020, 01:23:55 UTC | update module dependency graph + update module dependency graph in mintpy/__init__.py + remove duplicated mintpy/utils/variance.py and keep mintpy/simulation/variance.py + reduce the dependency level for the following modules by using utils0/1 and coord directly instead of using utils + utils/utils1.py: add get_residual_spectral_power_density() + version: update from beta verion to stable release | 04 January 2020, 01:08:35 UTC |
| fd14b11 | Zhang Yunjun | 01 January 2020, 01:19:51 UTC | fractal: add crop_data_max_square() + handling input data with shape in odd number + use the portion with least zero values | 04 January 2020, 01:08:35 UTC |
| 2215dea | Zhang Yunjun | 31 December 2019, 02:12:17 UTC | smallbaselineApp: ignore no-data pixels in lat/lon while generating waterMask.h5 + update function comments in simulation modules | 04 January 2020, 01:08:35 UTC |
| f8fed62 | Zhang Yunjun | 31 December 2019, 21:57:06 UTC | init simulation/decorrelation.py (#256) * init simulation/decorrelation.py + merge all decorrelation noise related functions from ifgram_inversion.py and simulation/simulation.py into a level1 sub-module simulation/decorrelation.py + rename simulation/forward_model.py as simulation/defo_model.py and move mogi_deformation() from simulation.py to defo_model.py + update related __init__.py and README.md files | 31 December 2019, 21:57:06 UTC |
| 3741154 | Zhang Yunjun | 27 December 2019, 09:52:50 UTC | fix bugs/warnings found by Codacy | 27 December 2019, 20:59:02 UTC |
| 3fbc3bb | Zhang Yunjun | 20 December 2019, 02:25:46 UTC | update copyright year update copyright year to 2013 as the earliest available date remove obsolete legacy/tsview_dev_yunjun.py more the following unused scripts to `mintpy/objects/insarStack`: + insarPair.py + insarStack.py + loadData.py + reader.py | 27 December 2019, 20:59:02 UTC |
| 0a47226 | Zhang Yunjun | 27 December 2019, 06:39:32 UTC | more robust coherence2variance calculation (#254) ifgram_inversion.py * bug fix for variance calculation while coherence is very close to 1 * handle all negative var in ifginv.phase_variance_ds() prep_isce.py: * calculate NCORRLOOKS from isce products * prep_isce: return warning message when no baseline file found * install basemap from native macport | 27 December 2019, 06:39:32 UTC |
| e83c09a | Zhang Yunjun | 19 December 2019, 02:49:12 UTC | replace zip command with zipfile module (#252) * replace zip command with zipfile module | 19 December 2019, 02:49:12 UTC |
| 0f6c3e1 | Zhang Yunjun | 05 December 2019, 02:55:41 UTC | save_kmz: add --cbar-loc option + add --cbar-loc option to modify the location of colorbar screen overlay + fix the not working issue of --cbar-bin-num and --cbar-label + remove the obsolete --cbar-height option | 05 December 2019, 05:30:59 UTC |
| b38a59c | Zhang Yunjun | 04 December 2019, 22:56:00 UTC | check/update reference point in asc_desc2horz_vert.py (#248) * check reference point and raise exception if the input files have different reference point. * remove obsolete 0 from np.array.flatten() * update REF_X/Y based on the REF_LAT/LON value | 04 December 2019, 22:56:00 UTC |
| 4193199 | Zhang Yunjun | 03 December 2019, 01:27:42 UTC | prep_aria: constain X/Y_STEP/FIRST as a 9 digits float to fix the potentially very slight inconsistency between the spatial resolution (posting size) between different ARIA GUNW products | 03 December 2019, 01:38:34 UTC |
| cd555fa | Zhang Yunjun | 02 December 2019, 22:33:09 UTC | support read/plot magnitude of .int file 1. objects.timeseries.get_design_matrix4average_velocity(): add optional refDate argument to specify the reference date 2. simulation.sample_decorrelation_phase(): more robust argument checking 3. utils.readfile.read_binary_file(): support reading (and plotting) magnitude of .int file | 03 December 2019, 01:38:34 UTC |
| 520b0ed | Zhang Yunjun | 27 November 2019, 20:03:48 UTC | utils.readfile: support 3 and 4 bands in binary files | 27 November 2019, 21:20:15 UTC |
| 9e6b1be | yunjunz | 27 November 2019, 00:28:52 UTC | support loading geometry only | 27 November 2019, 21:20:15 UTC |
| 7ce1392 | Zhang Yunjun | 26 November 2019, 05:31:00 UTC | update port to support ARIA-tools | 27 November 2019, 21:20:15 UTC |
| 0a861ac | Zhang Yunjun | 20 November 2019, 03:18:02 UTC | update conda install for basemap use the release version instead of git clone for faster install and smaller download, both in command line and conda_env.yml | 22 November 2019, 04:34:19 UTC |
| be4e50b | Zhang Yunjun | 04 November 2019, 02:40:25 UTC | update install via macports docs/ports.txt: 1. switch to +gcc7 except for atlas, which supports gcc5 only 2. switch default python from 3.6 to 3.7 3. remove hdf4 docs/installation.md: 1. use released archive of basemap from github, faster and smaller than git clone 2. use 'sudo -H' to solve the directory ownership issue. typo fixes Update default test directory in test_smallbaselineApp.py | 19 November 2019, 22:06:40 UTC |
| 022d08d | ehavazli | 19 November 2019, 21:10:19 UTC | plot.plot_gps: remove whitespace in site ID while saving to CSV (#243) change from column name 'Site ID' to 'SiteID' in GPSSitesVel.csv file. | 19 November 2019, 21:10:19 UTC |
| 14573cb | piyushrpt | 18 November 2019, 18:40:02 UTC | Save time-series in QGIS compatible format (#242) Adds support to export MintPy time-series in a QGIS ps-time-series plugin compatible shapefile format - https://plugins.qgis.org/plugins/pstimeseries/. Thanks @yunjunz for help with figuring out the directory structure. | 18 November 2019, 18:40:02 UTC |
| 990ad31 | Zhang Yunjun | 04 November 2019, 02:40:25 UTC | utils function for GSI F3 GPS daily solution (#239) utils/ptime: add yy2yyyy() objects/gps: + add read_pos_file() to read GSI F3 GPS solution generated by Bernese + add get_pos_years() to faciliate the file searching + add read_GSI_F3() as the generic reading function to extract info for specific GPS site with start/end_date sh/plot_smallbaselineApp.sh: copy *.txt file to pic folder | 04 November 2019, 02:40:25 UTC |
| d03fd45 | Zhang Yunjun | 03 November 2019, 19:02:30 UTC | copy cfg files to pic folder (#238) copy default/custom template files to inputs/pic folders for easy backup. more detailed info for the paper. | 03 November 2019, 19:02:30 UTC |
| d91e9e7 | ehavazli | 21 October 2019, 20:06:41 UTC | Write GPS LOS velocities to CSV file (#236) * write GPS velocities into a CSV file while plotting both InSAR and GPS velocities * return nan from GPS().get_gps_los_velocity() if no data | 21 October 2019, 20:06:40 UTC |
| 1f1e763 | Zhang Yunjun | 19 October 2019, 19:06:12 UTC | bugs fix for insar_vs_gps() | 19 October 2019, 19:11:37 UTC |
| ed9c673 | Zhang Yunjun | 19 October 2019, 18:30:30 UTC | insar_vs_gps: add min_ref_date and more comments | 19 October 2019, 18:40:00 UTC |
| 745b4c9 | Zhang Yunjun | 19 October 2019, 17:49:29 UTC | insar_vs_gps: add start/end_date objects/insar_vs_gps: add start_date and end_date argument to replace the hardwired value; if not given, use the insar time-series file as reference. gps: add get_baseline_change() to calculate the baseline change history of two GPS displacement time-series | 19 October 2019, 18:40:00 UTC |
| 1a2e3eb | Zhang Yunjun | 08 October 2019, 22:50:58 UTC | view: add --lat-label/--contour-linewidth option + add --lat-label option to customize the rotation of latitude label, in order to save space. + fix bug when the last figure has only one subplot, resulting in a 2D matrix previously, instead of a 3D matrix with 1st dimension as 1. + utils/plot.py: add --contour-linewidth option for the DEM contour background | 19 October 2019, 18:40:00 UTC |
| 5848cb1 | Zhang Yunjun | 06 October 2019, 03:48:01 UTC | plot_transection: bug fix for --off option (#233) * load_gbis: comment out the calculation of lat/lon/height information as they are now calculated in GBIS directly. * plot_transection: bug fix for --off | 06 October 2019, 03:48:01 UTC |
| 8eef481 | Zhang Yunjun | 04 October 2019, 19:57:06 UTC | update pyaps account setup info | 04 October 2019, 21:09:34 UTC |
| d7cc003 | Zhang Yunjun | 01 October 2019, 01:49:28 UTC | save_gbis: add --ellipsoid2geoid option + support converting height from ellipsoid to geoid for modeling with GBIS. This is required if the input DEM data is from ISCE or GSI DEHM data. + load/save_gbis: fix warning/backend issue for matplotlib + mask: restrict mask_isce_file() to ifgram files only + Update installation.md | 04 October 2019, 00:26:20 UTC |
| fb4423a | Zhang Yunjun | 01 October 2019, 23:39:36 UTC | easy check defo signal with asc/desc/horz/vert all in one (#230) * easy check defo signal with asc/desc/horz/vert all in one + asc_desc2horz_vert: - split main() into get_design_matrix(), asc_desc2horz_vert() - add --output-one/--oo option to write all input/output datasets into one file for easy management. + view.py: support display scale/unit operation for asc_desc2horz_vert one output file format. + save_roipac: add --keep-all-metadata to keep all ROIPAC metadata for easy data play. + fix bug in prep_isce * remove os import | 01 October 2019, 23:39:36 UTC |
| ccede87 | Zhang Yunjun | 29 September 2019, 02:35:20 UTC | update paper DOI move run_giant from MintPy to paper repo in geodesymiami | 30 September 2019, 15:48:42 UTC |
| 335903f | Zhang Yunjun | 29 September 2019, 01:23:21 UTC | save_kmz_ts: new options to customize display add -o / --output to specify output file name add --wrap to be able to re-wrap the velocity for color coding. expose --cutoff and --min-percentage options to modify the default high resolution output for deforming areas. | 29 September 2019, 02:25:18 UTC |
| acbaa39 | Zhang Yunjun | 21 September 2019, 04:38:01 UTC | Fix typo in README.md | 22 September 2019, 00:45:18 UTC |
| 781a53f | Zhang Yunjun | 19 September 2019, 19:14:34 UTC | ref_point: fix bug when input ref_y/x is 0 use "ref_y is not None" instead of "not ref_y" to check the validity of input reference y/x, which was ignored if the input ref_y/x has 0 value. simplify the code and add more comments. | 19 September 2019, 21:26:12 UTC |
| e92c131 | Zhang Yunjun | 19 September 2019, 04:03:06 UTC | plot_sbApp: use --wrap-range for ts file use -u cm --wrap --wrap-range -5 5 as default option to plot time-series file, to give consistent color range for easy comparison. | 19 September 2019, 21:26:12 UTC |
| 8375103 | Zhang Yunjun | 18 September 2019, 16:00:10 UTC | unw_err_phase_closure: import mpl with Agg backend | 18 September 2019, 16:05:12 UTC |
| b932725 | Zhang Yunjun | 18 September 2019, 02:59:01 UTC | readthedocs: add more links move docker/README.md to docs/docker.md to be displayed in readthedocs.io add colormaps, docker and code of conduct to nav bar in readthedocs. | 18 September 2019, 03:08:13 UTC |
| 752b926 | Zhang Yunjun | 18 September 2019, 02:57:38 UTC | use view.py for roipoly in generate_mask.py (#221) * use view.py for roipoly in generate_mask.py generate_mask: + add --keep-nan option to be able to not exclude pixels with nan values move get_poly_mask() from utils/plot.py to utils/plot_ext.py to be able to call view.py functions for more advanced plotting capability to facilitate the polygon selection. | 18 September 2019, 02:57:38 UTC |
| 66daae4 | Zhang Yunjun | 16 September 2019, 22:01:29 UTC | bug fix for multilook with AZIMUTH_PIXEL_SIZE (#220) * bug fix for multilook multilook: + check AZIMUTH_PXIEL_SIZE specifically, as it is not currently available from ARIA products yet. + use A/RLOOKS always with default value of 1 if not exists. + fix typo in the help message. * utils/utils0.get_lat_lon(): return the lat/lon of the pixel center instead of the upper left corner previously. * save_gbis: print cmd | 16 September 2019, 22:01:29 UTC |
| c981280 | Zhang Yunjun | 15 September 2019, 20:40:15 UTC | transection: support files with different resolution in geo coord (#219) * transection: support files with different resolution in geo coord plot_transection: + add support for multiple input files in geo coordinates with different spatial resolutions by using geo coordinate to grab transection data + upgrade --offset option to support one number or exact number of offset as input files + utils/utils.py: add transect_lines() to extract continuous transection data along multiple lines generate_mask: + add --revert option + enable main() calling from external script utils/plot.get_poly_mask(): improved plotting for dataset with non-negative value, such as DEM geocode: print cmd in cmd_line_parse() | 15 September 2019, 20:40:15 UTC |
| 3df5596 | Zhang Yunjun | 13 September 2019, 20:05:29 UTC | smallbaselineApp: check key 'mintpy.networkInversion.shadowMask' (#218) * smallbaselineApp: check key 'mintpy.networkInversion.shadowMask' smallbaselineApp: check for 'mintpy.networkInversion.shadowMask' key for update mode while generating the mask from temporal coherence. asc_desc2horz_vert: constrain the output data type to float32 utils/plot: add buffer_year argument in auto_adjust_xaxis_date() docs/google_earth.md: remove commands example as the user should check the --help from the script, which will be the most up-to-date. sh/plot_smallbaselineApp.sh: remove the trop_models variable definition and use for loop directly. | 13 September 2019, 20:05:29 UTC |
| 6887f8f | Zhang Yunjun | 11 September 2019, 22:53:06 UTC | add --zero for ALOS2 in process_isce_stack.py load_hdf5: support custom ds name more robust auto disp_unit for view.py geocode: use linear instead of bilinear for generosity | 12 September 2019, 17:20:45 UTC |
| a73e9de | Zhang Yunjun | 11 September 2019, 22:37:59 UTC | mask: auto check and convert data type to float32 (#214) * mask: auto check and convert data type to float32 + assign default fill value to np.nan. + change matrix data type to float32 if 1) fill value is nan AND 2) input original data type does not support NaN. * fix typo in load_hdf5.py example message | 11 September 2019, 22:37:59 UTC |
| e3b8762 | ehavazli | 11 September 2019, 18:25:11 UTC | Bug fixes for unwrapping error correction using bridging method for network modified ifgramStack file (#212) * objects/conncomp.py: - fix a bug for the case when connected components are more than 10 - raise an error when the labelRef value is zero * unwrap_error_bridging.py: skip the correction for dropped interferograms, otherwise it would cause the labelRef==0 error when 1) network is modified AND 2) when the reference point is in the masked out area in at least one dropped interferogram. | 11 September 2019, 18:25:11 UTC |
| 2bcdefc | Zhang Yunjun | 09 September 2019, 22:02:59 UTC | move tutorials in jupyter notebook from MintPy to MintPy-tutorial | 09 September 2019, 22:36:35 UTC |
| 9d49711 | Zhang Yunjun | 09 September 2019, 19:18:09 UTC | move paper dir out of mintpy to geodesymiami update link in README.md remove link from mkdocs.yml so that this will not show up as a independent page in readthedocs.io | 09 September 2019, 21:57:43 UTC |
| a638752 | Zhang Yunjun | 03 September 2019, 02:34:06 UTC | add .sh file extension to sh/run_multilook_geometry + Update links in google_earth.md + update custom colormap link in view.py help | 05 September 2019, 20:49:56 UTC |
| 158616b | Zhang Yunjun | 03 September 2019, 01:40:18 UTC | Update mkdocs.yml | 03 September 2019, 02:07:49 UTC |
| 5c2948e | Zhang Yunjun | 03 September 2019, 01:29:22 UTC | bug fix for save_gmt.py | 03 September 2019, 01:35:42 UTC |
| 8472cd5 | Zhang Yunjun | 02 September 2019, 23:05:45 UTC | fix bug while reference_date.txt not exist | 02 September 2019, 23:13:36 UTC |
| db95f34 | Zhang Yunjun | 02 September 2019, 15:04:57 UTC | add *.networkInversion.shadowMask option to be able to turn OFF the applying of shadow mask while generating mask of reliable pixels using temporal coherence. | 02 September 2019, 22:46:04 UTC |
| 3c32d1f | Zhang Yunjun | 02 September 2019, 03:40:15 UTC | switch default gzip compression to lzf for geometry | 02 September 2019, 22:46:04 UTC |
| 37580e3 | yunjunz | 01 September 2019, 19:46:34 UTC | add missing module import for glob | 02 September 2019, 22:46:04 UTC |
| 185ddf2 | Zhang Yunjun | 28 August 2019, 23:48:16 UTC | simplify titles in smallbaselineApp_aria | 29 August 2019, 01:22:44 UTC |
| 7221dd4 | Zhang Yunjun | 26 August 2019, 03:05:04 UTC | save_gmt: move auto output filename to the main() + add `sys.argv[1:]` back so that the calling of main() in python would work. + adjust indentation in objects/stack.py + update images of GMT colormaps from GMT website + Update installation.md | 28 August 2019, 17:54:09 UTC |
| 130219e | Zhang Yunjun | 26 August 2019, 03:24:10 UTC | update MODIFICATION_TIME for all ifgramDatasetnames in modify_network step (#198) update the MODIFICATION_TIME metadata value for all datasets defined in objects.stack.ifgramDatasetNames while calling ifgramStack.update_drop_ifgram() function from modify_network.py in the modify_network step. | 26 August 2019, 03:24:10 UTC |
| 7a45670 | Zhang Yunjun | 26 August 2019, 02:47:18 UTC | ignore ZERO value for coherence in ifgramStack.spatial_average() (#196) | 26 August 2019, 02:47:18 UTC |
| 583915d | Zhang Yunjun | 26 August 2019, 00:40:33 UTC | add links to jupyter notebook of ARIA-tools-doc (#194) * sh/load_data_aoi.sh: update comment * view: reduce cbar length in ratio for multiple subplots with large figure height * add links to ARIA-tools-doc | 26 August 2019, 00:40:33 UTC |
| a7bf383 | Zhang Yunjun | 24 August 2019, 20:24:32 UTC | update PULL_REQUEST template | 24 August 2019, 20:26:14 UTC |
| e63118f | Zhang Yunjun | 24 August 2019, 20:14:16 UTC | load_data: skip files with inconsistent size skip files while loading data if 1) not all unwrapPhase files have the same size AND 2) if there is an input subset, the max subset range is beyond the min file size. | 24 August 2019, 20:26:14 UTC |
| 37b8cd5 | Zhang Yunjun | 23 August 2019, 15:10:17 UTC | load_gbis: bug fix for single track inversion result (#191) + .github/config.yml: update message for an opening pull request + load_gbis.py: fix bug when input inversion result is based on one track of insar data only. + utils/plot.get_poly_mask(): improved color while selecting roipoly. | 23 August 2019, 15:10:17 UTC |
| a2712bc | Zhang Yunjun | 22 August 2019, 04:53:56 UTC | Create CODE_OF_CONDUCT.md | 22 August 2019, 05:00:13 UTC |
| 81038cb | Zhang Yunjun | 22 August 2019, 04:36:23 UTC | create issue and pull request template | 22 August 2019, 04:41:37 UTC |
| 9180b78 | Zhang Yunjun | 22 August 2019, 04:35:57 UTC | add .github/config.yml for probot | 22 August 2019, 04:41:37 UTC |
| 17fcaf7 | Zhang Yunjun | 21 August 2019, 23:05:13 UTC | Update CONTRIBUTING.md | 21 August 2019, 23:09:08 UTC |
| cbd9f70 | Zhang Yunjun | 21 August 2019, 15:15:19 UTC | generate_mask: merge --base and --shadow into one generate_mask.py: + add --base-dset and --base-value to be able to custom the excluded pixel value and its related dataset in the input base mask file + ignore --base if input --base-dset dataset is not found and continue running the script without --base option. + remote obsolete --shadow option fix typo in save_gbis.py support multiple input mask files in save_roipac.py adjust smallbaselineApp.py according to the new --base usage for the shadow mask while generating mask of reliable pixels after inverting the network. | 21 August 2019, 23:09:08 UTC |
| 07f8d0c | Zhang Yunjun | 21 August 2019, 05:09:27 UTC | add notebook for unavco short course (#186) * notebook: simplify images directory * add notebook for unavco short course add smallbaselineApp_aria.ipynb for ARIA + MintPy workflow. * Update README.md | 21 August 2019, 05:09:27 UTC |
| 6c21549 | Zhang Yunjun | 21 August 2019, 00:55:49 UTC | fix potential path bug of save_kmz.py | 21 August 2019, 00:57:45 UTC |
| 121e7f8 | Zhang Yunjun | 20 August 2019, 18:31:49 UTC | load_gbis: add the origin lat/lon of the local coordinates | 21 August 2019, 00:57:45 UTC |
| c0a7baf | Zhang Yunjun | 18 August 2019, 03:57:45 UTC | info.py --dset: show data stats | 21 August 2019, 00:57:45 UTC |
| ef693f2 | Zhang Yunjun | 17 August 2019, 22:29:48 UTC | load_gbis: add DEFORMATION_MODEL load_gbis: add metadata DEFORMATION_MODEL utils/plot.auto_shared_lalo_location(): new function to return the lat/lon label location in tuple of 4 int, for multiple subplots. | 18 August 2019, 01:42:24 UTC |
| 657f17d | Zhang Yunjun | 14 August 2019, 15:17:23 UTC | fix conflict in smallbaselineApp.ipynb open the final velocity map at the end of testing, so easy checking. | 14 August 2019, 15:19:42 UTC |
| f65abba | Zhang Yunjun | 14 August 2019, 04:26:15 UTC | info: add --dset option to print out dataset info.py: add --dset option to printout the dataset value for easy checking the dataset of HDF5 file objects/stack: + rename openH5() to open_hdf5() + add open and close functions inside write2hdf5_block() so that file is properly closed always. ifgram_inversion: + adjust for the updated timeseries.write2hdf5_block() so that the file is properly closed even if the program is terminated in the middle of running. | 14 August 2019, 14:52:38 UTC |
| acaa3fe | Heresh Fattahi | 13 August 2019, 22:30:41 UTC | adding block by block writing for timeseries inversion (#181) * adding block by block writing for timeseries inversion + object/stack.py: - added new methods to separate dataset creation from writing - added a list of indices to represent the 3D block in the new write method for timeseries class - added a method openH5 which simply opens the HDF5 file when called + ifgram_inversion.py: writing each block of timeseries is done right after estimating that block Note: + For Dask, the writing has not changed. + If we agree that this is the way to go, then we should do similar thing for other files (tempCoh, etc) and for Dask inversion and for few other steps (e.g., DEM error correction, etc). | 13 August 2019, 22:30:41 UTC |
| 9a475ba | Zhang Yunjun | 09 August 2019, 18:27:43 UTC | update usage of grabing the list of built-in colormaps from matplotlib | 09 August 2019, 18:29:03 UTC |
| 1753ec0 | ehavazli | 09 August 2019, 18:10:32 UTC | [ImgBot] Optimize images (#179) *Total -- 5,550.29kb -> 4,585.70kb (17.38%) /docs/tutorials/docs/images/smallbaselineApp_workflow.png -- 272.60kb -> 163.04kb (40.19%) /docs/tutorials/docs/images/FernandinaSenDT128_unwrapPhase_wrap.png -- 2,927.26kb -> 2,281.56kb (22.06%) /docs/resources/star.png -- 2.24kb -> 2.03kb (9.39%) /docs/tutorials/docs/images/net_modification.jpg -- 2,346.89kb -> 2,137.84kb (8.91%) /docs/resources/shaded_dot.png -- 1.30kb -> 1.23kb (5.4%) Signed-off-by: ImgBotApp <ImgBotHelp@gmail.com> | 09 August 2019, 18:10:32 UTC |
| ba9de4b | Zhang Yunjun | 08 August 2019, 18:34:34 UTC | wrap up for v1.2beta (#178) * Update README.md * Update version.py | 08 August 2019, 18:34:34 UTC |
| 97fc78e | Zhang Yunjun | 08 August 2019, 16:00:44 UTC | add "citing this work" in README (#177) * add "citing this work" in README * suppress matplotlib UserWarning while calling plotting scripts. * add GPS related options back to tsview.py to avoid undefined arguments error, but raise an exception in tsview.py while --gps-comp option is input. * update plotting script usage in smallbaselineApp.ipynb * fix bug of the relative path of data files in save_kmz | 08 August 2019, 16:00:44 UTC |
| c2750e0 | Zhang Yunjun | 07 August 2019, 23:08:39 UTC | fix bug of mask from geometry in dem_error.py (#176) dem_error: ignore pixels with NaN value in any of the geometry dataset prep_aria: add more notes in example smallbaselineApp: move waterMask.h5 generation from step `load_data` to `modify_network` turn ON saving to HDF-EOS5 in testing | 07 August 2019, 23:08:39 UTC |
| aac5999 | Zhang Yunjun | 05 August 2019, 04:17:06 UTC | add DOI of the paper pre-print + remove obsolete dir_*.ipynb and update directory structure link smallbaselineApp.ipynb + prep_aria: print out dataset type and size | 07 August 2019, 17:59:44 UTC |
| cae87e5 | Zhang Yunjun | 05 August 2019, 03:56:54 UTC | add docs/dir_structure.md (#170) * Create dir_structure.md * Update mkdocs.yml * Update save_hdfeos5.py for HDF-EOS5 format reference link | 05 August 2019, 03:56:54 UTC |
| d48873e | Yunmeng Cao | 04 August 2019, 18:29:41 UTC | update lookup_geo2radar.py using scipy.interpolate.griddata (#167) * using scipy.interpolate.griddata to convert the lookup-table * support parallel processing | 04 August 2019, 18:29:41 UTC |
| fea1834 | Zhang Yunjun | 02 August 2019, 18:05:53 UTC | add docs/conda_env.yml for mintpy environment installation update installation note for mintpy environment | 02 August 2019, 19:10:15 UTC |
| c3ed146 | Zhang Yunjun | 01 August 2019, 22:11:00 UTC | add relevant literature to example datasets | 02 August 2019, 19:10:15 UTC |
| 70387ba | Zhang Yunjun | 01 August 2019, 21:41:02 UTC | prep_aria: convert azAngle from ARIA to ISCE style (#166) * prep_aria: convert azAngle from ARIA to ISCE style * update comments while plotting GPS vs InSAR | 01 August 2019, 21:41:02 UTC |
| bc99d1f | Yunmeng Cao | 01 August 2019, 01:54:21 UTC | convert lookup-tables under geo-coord to radar-coord (#144) * add lookup_geo2radar.py to convert the Geo-coordinates based lookup-table (GAMMA, ROI_PAC) into the Radar-coordinates based lookup-table (ISCE). * add utils.get_lat_lon_rdc() to generate lats/lons under radar-coord when latitude/longitude is not available, taking into account the tilted geometry of radar-coded file. * use utils.get_lat_lon_rdc() in tropo_pyaps3.py for radar-coded products with lookup table in geo-coordinates, for GAMMA and ROIPAC products. | 01 August 2019, 01:54:21 UTC |
| f17490e | Zhang Yunjun | 31 July 2019, 22:35:54 UTC | ifgram_inversion: comment out ts_std to save memory (#163) + commenting out ts_std dataset to reduce memory usage + remove obsolete --split-file option to simplify the code | 31 July 2019, 22:35:54 UTC |
| 1aa5881 | Zhang Yunjun | 31 July 2019, 03:16:21 UTC | check azimuthAngle while plotting gps vs insar (#161) * update comments for plot_transection.py in smallbaselineApp * utils.get_geometry_file() support checking of a list of datasets * check both incidenceAngle and azimuthAngle while calling utils.plot.plot_gps() * prep_aria: do not create azimuthAngle dataset if no azAngle file is input * stackDict: remove UNIT metadata while loading ifgramStack and geometry* files * disable GPS related options in tsview.py for now because "insar displacement vs gps displacement" is not implemented yet. | 31 July 2019, 03:16:21 UTC |
| 9d9db53 | Zhang Yunjun | 30 July 2019, 21:04:07 UTC | specify custom ifgram file pattern while calling prep_isce.py from load_data.py prep_isce: change default --file-pattern argument value to *.unw only becuase *.rsc file for cor file is not necessary | 30 July 2019, 21:06:03 UTC |
| 823c8cc | Zhang Yunjun | 29 July 2019, 17:23:24 UTC | load_gbis: add optimal model parameters and convert model x y into longitude and latitude make MODEL_MIN_HEIGHT as optional metadata | 30 July 2019, 21:06:03 UTC |
| 4495dea | Zhang Yunjun | 28 July 2019, 23:26:33 UTC | version: hide subprocess stderr message (#159) hide git error message if mintpy is not installed through git clone. | 28 July 2019, 23:26:33 UTC |
| 805dc29 | Zhang Yunjun | 28 July 2019, 20:02:27 UTC | Update version | 28 July 2019, 20:25:00 UTC |
