swh:1:snp:93431e0de56bff942fc37a8298daad635afceed0
Tip revision: 445112bcb708b6ddce327577cdd9c4a76a185fdf authored by John Bradshaw on 24 October 2017, 10:52:48 UTC
Merge remote-tracking branch 'origin/GPflow-1.0-RC' into john-bradshaw/binary-class-GP
Merge remote-tracking branch 'origin/GPflow-1.0-RC' into john-bradshaw/binary-class-GP
Tip revision: 445112b
base.py
# Copyright 2017 Artem Artemev @awav
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import abc
import enum
class GPflowError(Exception):
pass
class Build(enum.Enum):
YES = 1
NO = 0 # pylint: disable=C0103
NOT_COMPATIBLE_GRAPH = None
class ICompilable:
__metaclass__ = abc.ABCMeta
@abc.abstractproperty
def graph(self):
raise NotImplementedError()
@abc.abstractproperty
def session(self):
raise NotImplementedError()
@abc.abstractproperty
def feeds(self):
raise NotImplementedError()
@abc.abstractmethod
def compile(self, session=None, keep_session=True):
raise NotImplementedError()
@abc.abstractmethod
def initialize(self, session=None):
raise NotImplementedError()
@abc.abstractmethod
def is_built(self, graph):
raise NotImplementedError()
@abc.abstractmethod
def clear(self):
raise NotImplementedError()
@abc.abstractmethod
def _build(self):
raise NotImplementedError()
class IPrior:
__metaclass__ = abc.ABCMeta
@abc.abstractmethod
def logp(self, x):
"""
The log density of the prior as x
All priors (for the moment) are univariate, so if x is a vector or an
array, this is the sum of the log densities.
"""
raise NotImplementedError()
@abc.abstractmethod
def sample(self, shape=(1,)):
"""
A sample utility function for the prior.
"""
raise NotImplementedError()
@abc.abstractmethod
def __str__(self):
"""
A short string to describe the prior at print time
"""
raise NotImplementedError()
class ITransform:
__metaclass__ = abc.ABCMeta
@abc.abstractmethod
def forward(self, x):
"""
Map from the free-space to the variable space, using numpy
"""
raise NotImplementedError()
@abc.abstractmethod
def backward(self, y):
"""
Map from the variable-space to the free space, using numpy
"""
raise NotImplementedError()
@abc.abstractmethod
def forward_tensor(self, x):
"""
Map from the free-space to the variable space, using tensorflow
"""
raise NotImplementedError()
@abc.abstractmethod
def log_jacobian(self, x):
"""
Return the log Jacobian of the forward_tensor mapping.
Note that we *could* do this using a tf manipulation of
self.forward_tensor, but tensorflow may have difficulty: it doesn't have a
Jacobian at time of writing. We do this in the tests to make sure the
implementation is correct.
"""
raise NotImplementedError()
@abc.abstractmethod
def __str__(self):
"""
A short string describing the nature of the constraint
"""
raise NotImplementedError